FB2026_03 , released September 17, 2026
Transcript: Dmel\Su(var)3-3-RA
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General Information
Symbol
Dmel\Su(var)3-3-RA
Species
D. melanogaster
Annotation Symbol
CG17149-RA
FlyBase ID
FBtr0074825
Feature type
mRNA
Associated gene
Dmel\Su(var)3-3
Evidence Rank
Length (nt)
3681
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 33 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      AAGAGATGTTGGTGGCGTTGTGCGGCTGCCACACCGCCAGAACGGTATAAACAATTTTTATATTTTGCACTTTTAAATGT
CGGAAAATCAATCTGTGAGCCAACCTAATATGAAAAGCGACGCATGGATCAGCTGATACAGCATTTGATAATAATACTTC
ATTGTCATCAGAGAAGCAGGGAGTTTAGACCAAAAAAAAAAACTACACCCGCAGTCCGATCCTCAAAACGTGTGATAATA
AAATCACGGAACAATCAGAAAAATATCGAAAGAATAATGCGGCAATATTCCGGTTTGGTGGACTAAAGAATTCGTGATTT
TCGAACGTGAGCTAGCTTTATTGGAATTGGAAATGAGTTCGAGAAAAATTTAAACGGGTTCCACTTTTGAAGGGCCAACT
TTTCAGTGTCCCGGTGGCAGTTCCATAATCCGGAGATGAAACCCACCCAGTTCGGAGGCAGTAGCTCCAAGATGACCGAG
CCAATTGAGTATGTGACGCTAATTAGCGACGATTCCGATGGTGAGCCCACGCCCAAAAGAAACGTCAATCACCCGCCGTC
GGCATTGTCAGCACCCAATCCTGGTCAGAAACAAAAGCACCCGGATGAGGACTCAAATGACGCACCTGCCACCAGCGATG
AGCGACGCACAAGTAGGCGCAATCGGCCAAAAGTGGATTATAGTAACAGGCCTAGTGGAAGTGGAGACACCGCCTCCAAT
GACAAGTCAGGATCGGCATCCATGGGACCTAACAACCAGCAAGCAGAGCGTCGCAGCCAAAGCCAAACCCGCAAGTCAGA
AGCCAATGCTACCTCCTCCTCCGTGTCCGGACCCAGTGCCGGAAATTCCAGACCGTCCCAGAACGGAGATTCCAAGGACC
GGGATGCCGGCACGCCCACGGTTTTGTCTGGCCAAGAGGGCGCCGTCTTCCAATCTCGCCTGCCATTTAACAAAATGACA
CCCAACGAAGAGGCCTGCTTTCCGGACATCAGTCGCTCGGGCATTCTCGGCCATCGGGTATTCCTCAACATTCGTAACAG
CCTCTTGCACATGTGGGTGGACAATCCCAAGATCCAGCTGAGCTTCGAGATCGCCCTGAAGAACCTGCCGCCGCCATTCG
ACAGCGAGCCCAGTTTGGTAAGGCGAGTACACTCGTTTCTGGAGCGTCATGGCTTCATTAACTTCGGCATCTTTAAGCGA
CTTAAGCCTATACCCGCCAAAAAGCTGGGCAAAGTCATAGTGATTGGGGCAGGGATCTCCGGCTTAGCAGTGGCACACCA
GTTGCAGCAGTTCGGCATGGATGTGATCGTCTTGGAAGCGCGGGATCGGGTAGGGGGACGGATATCTACGTTTCGGAAGA
ACAGCTATATTGCCGATGTGGGAGCAATGGTGGTTACCGGCGTCTATGGCAATCCAATGACGATCCTCAGCAAGCAGATC
GGTATGGACCTAGTTCCCATCCAGCAGACATGTCCACTTTACGGCCCAGATGGAAAGCCCGTGCCCAAGGAGAAGGATGA
CGTGATCGAGAGAGAATTTAACCGACTGCTGGAATCAGCCAGCTACCTGTCCCACCGCCTTGATTTTAACTACGCCGGCG
ATTGCCCAGTTTCGCTGGGCGATGCCTTGGAGTGGATAATCAGTATGCAGGAGATGCAGGTGATGCACAAACGGGGGCAG
CACATGCAGGAGATCATAGCCACCCAAACGAAGATCATTGAACAGCGTCGTCGACTGAAAACCCTTAGAGATACCATCGG
CAAACTAAAGAATGAGCACTTGGCAATGATCAACCAGCGGAAACCCAAAGGCACGGATGGCGATCTGAAATACTGTTACC
AAGAGTTTAACATTCGGAACACCCAGATCAAAATGGAGGAAACGATCAGTACGTTTCACGATCTCCATGCCGAGGAAAAG
CAGATGTTAGCCAAACTCCACGAACTGGAGCAGAACCGACCTAGCGATGTGTACCTCTCGTCCCGCGACCGCCTGATCTT
GGACTGGCATTTTGCCAACTTGGAATTTGCTAATGCCACCCGACTAAATAACCTGTCGTTGAAGCACTGGGATCAGGACG
ATGACTTCGAGTTTATTGGCCACCACACAACTGTGCGGAACGGTTATTCATGTGTGCCTGTAGCTCTTACTGAAAACCTG
GACATCCGTGTCAATAGCGCCGTCAAGGAGATAAAGTACGGCACCAAAGGTGTGGAAGTAGTGGCTGAAAACTTGAAGAC
ATCCAATTCGCAGATGACATACAAGGCAGACCTTGTCGTCTGCACACTTACTCTGGGCGTCCTCAAAGTGGCGGTAGCAC
ATAAGGAGTCACAGCAGAGTAACACAGTCAAGTTCGACCCGCCATTGCCGGACTGGAAACAGCAGGCCATCAAAAGGCTG
GGATTTGGGAATCTCAATAAGGTTGTGCTCTGCTTCGATCGCATTTTTTGGGATCCCAACGCTAATCTCTTCGGACACGT
GGGCAGCACGACGGCGAGTAGAGGAGAAATGTTTCTGTTCTGGAGTATAAGCTCATCTCCGGTGTTGCTCGCTCTAGTCG
CCGGAATGGCAGCGAATCTGGTGGAGAGCGTGACGGATGACATCATAATCGGGCGTTGTATGTCGGTGCTAAAAAACATC
TTCGGGAATACCTCTGTTCCACAACCCAAGGAAACAGTGGTAACGCGTTGGCGCAGCGATCCCTGGGCCCGTGGGTCGTA
CAGCTACGTATCCGTTGGTTCCTCGGGCAGTGACTACGATCTGCTGGCGGCGCCGGTCATTCCGCCGTCCAGTAAGGATG
CGGAAGGATTGCCACGGCTATTCTTCGCGGGTGAGCATACGATACGGAATTATCCGGCCACTGTGCATGGAGCGTACTTG
AGCGGATTGCGCGAGGCGGGACGTATTGCGGATTACTATCTCGGCTATCCAGAGGGAACACCGCCGGACATTGGCTACTC
GGTGGCTGAGGCGGCCAATCTGGTGTCCGTGGGAAATGTTGTCAAGCTGCGCGACCTCTCGCCCAATCTATCTGACTCCT
CCCCGTCGTCAAAGAAGTCGGAGGAGAATTCAAACTCAAACACTGCCGACTCTACGGAGCTACAGTAACAATGTATTTAG
CGTGATGGATTTGGTCCCCAGCAGTTACTCCTAGAGCGTTTAGTTTTGTATCATACAACTGGGGCTCGCTGTTTAAAACG
AAGCTAGGCCGCTGTAAATACCTAAGACTATTCAACTAAGCATAGACCACTTTCATTCAACCAATTATAAATTAAGATAA
AAAGCAATAACACCCAACAAAGCAAATCCTCTTCAGTGTTTCCTTCAGATCAAAGTAAACCAACCTCTGTGCGCCTATAA
TTGATCAACAAATGCAATCATCTATCATAACTTTCCGTACCACTTACCCGCCAATGAGGAGTATATCTTTTAAGTATATT
ATCGCCTATAAGATTGTTTTCAATAAGTATTTTGTAAATTAAATTTGAAAATAGTAAATTAAATTGACGCCGATATTTTT
AATTAGGTTAATTTAATTTAAGTACAAATTTCATATTACTTCCAACTTAAAAACACTTTCAATTTTTTTAATATCTTATT
GTTATCTTGATAAAATACGATGTAGAAAAATGTGTACGCAAATCATGGCATAAATTGAGTTTTAAAATATAATGTAAGCT
T
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Su(var)3-3-RB
      FBtr0074826
      3615
      Su(var)3-3-RC
      FBtr0332693
      3555
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Su(var)3-3-PA
      FBpp0074594
      890
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Su(var)3-3-PB
      FBpp0074595
      890
      Su(var)3-3-PC
      FBpp0304939
      870
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (3)
      Reported As
      Symbol Synonym
      CG17149-RA
      (FlyBase, 1996-)
      Hdm-RA
      Su(var)3-3-RA
      Secondary FlyBase IDs
        References (2)