FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Ctdnep1-RA
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General Information
Symbol
Dmel\Ctdnep1-RA
Species
D. melanogaster
Annotation Symbol
CG1696-RA
FlyBase ID
FBtr0077226
Feature type
mRNA
Associated gene
Dmel\Ctdnep1
Evidence Rank
Length (nt)
3043
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 63 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      GCTGCGAAAGTGCGATAGTATCGAATAAACATGAGTGTGTGCATGAGTGTGGGAATTTATTAAACAAAAACGAAACGCGG
ACAAACTATATTTATGTAATAAACACTAAGCCGCAGCGCCAACGAGTAATGAACAGTCCACGGCCAGGTCGTACTATTCA
GGCGAACGCACCTCGCAATCGACTGCAATCAAAGTGCAATAGCTCAATCAATTGATTCGTTTTGCTCAACCAAAAACAAA
ATCTATTCCCAAATCGGTGCGATAGTTGCCAAAATATAAAAACTACACTACGCTAAAAAAAAAACAATACACTCACACAC
TGGCGTACAAGACAACAAAAGAGAAGAAGAAGAGCAGACGCCAGATATAAAAAGCCCCCAAAAGAATTGGAAATAAGACC
ATACCCCTCCTTCTCCCTTGAAAAGGGACCTTAAAACTAGGCGACACCGAATAATTGAACTCAAGTAAAAAACCGGGAAA
AGAGAAAAACACTTTCAACAAAATATCTAGAAGCCTTGTTATCGATTTTGTTCCGGGTTTTTTTTGTGTGAGTGTGTGTT
GTGTGAAGCGCGCCCGCGGGTGTGTGGGTGAGTGTGCGTGTGGCTCTCGGCGCGTTATCAAAAACAACAACAATTCGTTG
CAAAAGAAAAAATAAAGTAGAGGAGGCGGAAGAAGAAGAGGAATCTGCTCGCACCGCGGTCAATCGCGGATCGTGGTCGA
TTTATCGAATTAATCGCCCCGAACAAAAAAAACACCGTACAAGGACTTGCACTATTTCCAATGATTTCGCTGCTGCAAAT
GAAATTCCGTGCGCTTTTGTTGTTGCTATCAAAAGTATGGACATGCATTTGTTTCATGTTCAATCGCCAAGTGCGAGCTT
TTATCCAGTATCAACCGGTTAAATACGAACTCTTCCCGTTGTCACCCGTCTCGCGGCACCGCCTGAGCCTGGTGCAGCGC
AAGACCCTCGTTCTGGACCTGGACGAAACGCTAATCCACTCCCATCACAATGCGATGCCCCGGAATACGGTGAAGCCGGG
CACGCCGCACGATTTCACTGTCAAAGTGACCATCGATCGGAATCCAGTGCGCTTTTTCGTGCACAAGCGACCGCATGTGG
ACTACTTCCTGGACGTGGTCTCGCAGTGGTACGATCTGGTGGTCTTCACGGCCAGCATGGAGATTTACGGAGCGGCGGTG
GCAGACAAGCTGGACAACGGACGAAACATCCTCCGGAGGCGATACTACAGACAGCACTGCACGCCCGACTACGGATCCTA
CACCAAAGACCTGTCGGCCATCTGCAGTGACCTAAATAGGATATTTATCATCGACAATTCGCCCGGCGCCTATCGCTGTT
TTCCCAACAACGCCATACCCATCAAGAGTTGGTTCTCGGACCCGATGGACACGGCGCTGCTGTCGCTGCTGCCCATGCTG
GATGCGCTGAGGTTCACGAACGACGTGAGATCGGTGCTGTCGAGGAACTTGCACCTGCACCGCCTCTGGTAGCAGGTGGG
CCGCCTGTCGCTAGTTTAGTTTATCTATTTAGAAGGAGCACTGAGGGCCAGCGAAGTGGGGAGAATATCTTCTGAAATTA
ACAACAAACAAGGTGGTGCTGTGACACATTAACGAATTTGTTCATTATTATTTAAAATTTGTACCATTCAGTCAAATGAG
CGGAGATAAGATGAGACAAACAGATAAAGCAGAAAGTTGAGGATATATTGGGAGATTTGGAAGCGATGGTTTATTTCTCC
TTTTGTGTATAGACTAACAGTTTTTTTTTAACAATCTAATTATGCATACATACTTGTCCATATATGTAGAGACCAGCTAT
TTTTATTAGACATTTTTTTCGCTTGTTTTTTTGGGTGTATATTTTGATTATAATATCAAATAAAAACTCTTGAACACAGA
CAGTATATAGTATAAAGTATATATATACAGTATACAGTATATATATGAATGTAAAGCTGAGCAGAAGGCGAAGCCACAAC
ATAAAGAACAAATTTGTCAAGTTATATATCATATTATTGTAATTTAAATCTAAGGCCACTTACAACAACAGTCTTGTAAT
TTCTATACCATGATAACAATTAACTATTATGACACTGGAGTTGTTTTTGTGCAGATACGAACTAACAAGACGAAGCAAAA
TACTTATAGTTATACAAATTAGTTAATTACGAAACTTAACTTGGACATCATTATTATGGATAATTATTAAATATGTAACC
GATTCTGTATAGACTTACGTACGTTCTGCCCTTGTTTCCTGTACAAAACTAAACGGATGAAAGATCTTCAAGAGTTTCAT
TGCTTGCAAACCAAACATAACACTTTTCTATGGATAAGATTTTTGGGGAAGTTATATATTTACGACTAAGCAACAACCCA
CAACTATAAACTACTATTAAAGTAAACAACAACCGAGGAGCAAGCAAGTAAGGCAAAATTTATATTTTGTAAGGCGAGCC
AAGTAGCGAAAAGAATTAAAAATCAAATTAATTCTGATAGGATCGGATCAGATCAGGTTAATGAGCCGCAGACTGGGACA
GATATATATAGGGAGTTTAGAGAGCCAAATCACTAATTATACGAGAACCGAGTTAGTCTGAGAATTGAGAAATCGTGGCA
CATCATCCGAAGCATCACAGGATATTCAGGATATTCCGGGCAGCAGCAGAGGAATTAGGCGAGAGACAAAAAGAAACACG
TGAAAACGGCTTCCATAGTTAATGTTATTTCCAAAAGCATAAATACACCACTCTAAACTAAACAACAAAAGCTTGCACAC
GCCCTTACCCCTAACCCCACCCTTATCCACTTGTTCTTTTGATCGTATTGTACATTTATAACAATCAATATTTGTTTATT
TATTGCAAGGAAATCGAGAAAGATACGTGTATGCGATGTTGTTAATTTTAAGTAGTTGATAGCAAATTTGTTAAACTGAA
GAGTAATGAAATAAATAAGAAAGGGAAAGGGAAGGGAAAATCAGAAAAAGAATTACAAAAATAAAACAAAATCATGCAAA
ATC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Ctdnep1-RB
      FBtr0339623
      3034
      Ctdnep1-RC
      FBtr0339624
      2860
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Ctdnep1-PA
      FBpp0076921
      243
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Ctdnep1-PB
      FBpp0308686
      240
      Ctdnep1-PC
      FBpp0308687
      182
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (4)
      Reported As
      Symbol Synonym
      CG1696-RA
      (FlyBase, 1996-)
      Ctdnep1-RA
      Dd-RA
      l(1)G0269-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)