FB2026_03 , released September 17, 2026
Transcript: Dmel\hydra-RA
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General Information
Symbol
Dmel\hydra-RA
Species
D. melanogaster
Annotation Symbol
CG1338-RA
FlyBase ID
FBtr0077294
Feature type
mRNA
Associated gene
Dmel\hydra
Evidence Rank
Length (nt)
1598
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 1 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CATTCGTTAACATCAAAATCAGTTAGACCTCTCTGAAATCAAAAATTTGTTACAACCAAATTTTTCAATACATTTTTACA
TTCAGCTACAATATGTATTCTGGTGTATTCTATCATTCATTATACTCATTCGTTAACATCAAAATCAGTTAGACCTCTCT
GAAATCAAAAATTTGTTACAACCAAATTTTTCAATACATTTTTACATTCAGCTACAATATGTATTCTGGTGATTTAAAGA
CATCGCAAGTCCGACGTTTAGCGAAGTCGGTTACTTTTCTTTGCCGCAACGCTTCGGAATATTCCTGGAAGAATTCAGGA
TTCGAGGTACGCTCGGGCGTAGCTTCTGCATGCAGGCTTCCCAAGTGCCCAACACTCCAGAGGATTCCAACCAATCGTGA
CGTCAATGAGAGGGAGAAACCCTATTCCACATTCAAAATAGAACACGATCGAACACGAATCCAGGAAATGTGGCAAAGGT
CCAGAATAGGGGCCAGAGAGCAGAAAAGCCTCCGCGGCTATCAGCCCGCCAATTCTGACGTGAATACCGATTCAAAGGAA
ACCATCAATGCCCTGGACAAAGTGAAGCGCATAGAGGAGCGGCGTAAAATCCAAAACAAGATGCGCGCCCTCATGGAAGA
GCAGCACATGAAGGACGAGCGAATCCAGGAGGAGAAGGATCGTGTGATCAGGAAGGAGGTTCTCGTCGAGCGAGATCCGG
CCAGGAAGCAAACATTCGCGGAGTACTCTCCTTTCCGCAACCGAGAGAAGGGCAAACCAGAAACCTGGGTTTCAGCCACC
GTTTTGGCGGCAACGGGAAAAATGCAGCAGCATAGATACATGCAGACTCCTCCGAAGAAGATGAACCCCCTTAAAGTAGA
AGTCGTGGTTCAAAAGCCGAGCCAATCAGTTCGAGAGAAATCGGCCACCGGCACCACATCCGGCCAACCCAATCATACCC
ATACCGACATGTCCAGTCGTGCGAAATGGGCCAAGGCCGCCTTGGAGTTGCACAAGAAGCGCGCCAAAGAAATGGACGAT
ATCCTATCTCTGGGAGGATACTCCAATGAATCTGCCTGCCTGAAATTGAGTGAACTATCTTCTATGCGCAAAGCAAGACG
TCACTAGGCAATGAGACATCTACACATTCCGTTTTGAAAATATCCCGGAGCTTGAACGAATCGATCCTGACTTATAGCTT
TGAACCTCATTACATTACTCTCTTTTAAGTGTGACTTTTCGGAGGCAACGCATATTCCTACATCATGTTGACATTCCGTT
TTGAAAATATCCCGGAATGGGAGCAAACCCCTATAGATCCAGACTCAATCCTGACTTGTAGCATTGAACCTCATTACAGG
ACTCTCTTTTAAGTGTGACTCTTCGGAGGCATAGCGAAAGAAAAAAAAAAACCCGGAATGGGAGCAAATCACACCAGATC
CAGACTCGATCCTGACTTGTTGGACCCCATTACAGGACTCTCTTTTAATTGTGACTTTTCGGAAAAGCGAACTAAATCTT
ATAAATATTATTTATACCATTTCTAGAAGATATATTTTTGGATAAATCTAATAAAAAAAAAACACACACTTTTTAAAG
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          hydra-RB
          FBtr0077295
          1440
          hydra-RD
          FBtr0304574
          1458
          hydra-RF
          FBtr0304575
          1476
          hydra-RG
          FBtr0304576
          1474
          hydra-RH
          FBtr0304577
          1475
          hydra-RI
          FBtr0304578
          1465
          hydra-RJ
          FBtr0343572
          1459
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          hydra-PA
          FBpp0076986
          302
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          hydra-PB
          FBpp0076987
          302
          hydra-PD
          FBpp0293116
          302
          hydra-PF
          FBpp0293117
          302
          hydra-PG
          FBpp0293118
          302
          hydra-PH
          FBpp0293119
          302
          hydra-PI
          FBpp0293120
          302
          hydra-PJ
          FBpp0310172
          302
          Comments

          Corresponds to isoform #2 (FBrf0201565)

          Transcript terminates at site supported by polyadenylated cDNA.

          Transcript start site approximates RNA-Seq coverage data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG1338-RA
          (FlyBase, 1996-)
          hydra-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)