FB2026_02 , released June 18, 2026
Transcript: Dmel\Prp40-RA
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General Information
Symbol
Dmel\Prp40-RA
Species
D. melanogaster
Annotation Symbol
CG3542-RA
FlyBase ID
FBtr0077648
Feature type
mRNA
Associated gene
Dmel\Prp40
Evidence Rank
Length (nt)
2906
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 198 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      AGTTTCATTGCACAATCGACATCTCTGGCGTGGAAAGCGGCATTCGCTTTGAGAATTTTACGGATTTTTTCAATTACCGA
AAGAAAAGTGAATTGGCCGGCGCAGCACGCAACGACCGGTAGACTCTCGGTGCACCCATTACCCATATAGCAAAATAGTG
AAATGAATGTTCCTCCTAGCGTGGGCAATGGAGGAGCGCCACCGGGAAGGGGCATAGGCTACACGCCGCCCGGTGCAATC
GTGCCGCAGTTTCCACCACCCGGATTTGGGGCCCCACCCCCACCGGAGCTGGCCGCCGCCTTCGGGGTGATGGCCACCAG
CACCGAGTGGACGGAGCACAAGGCGCCGGACGGACGACCATACTATTACAATCAGAACACGAAGCAAAGCTCGTGGGAGA
AGCCGGAGGCTCTGATGACGCCCGCCGAGCTGCTGCACAACCAGTGTCCCTGGAAGGAGTATCGCTCGGATACGGGCAAA
GTGTACTACCACAACGTGGCCACCAAGGAGACCTGCTGGGAGCCGCCGCCGGAGTACGTGGATATGAAGGCCAAGGCGAA
GGCGGAAGAAGCTGCTGCAGCCGCCAAAGCCGTAGCAGCCATGACATCATCCAGCTTAGCCGGCATGGTGCCACCTGCTG
CTCTGGCTAGTATTCTTCCCGCTGCCCTGCCTGTTGCCCCCCGATTACCGACTCCTGAGATCCACTCGCCGCTGACACCC
AGCAGCAACGAGAACTCGTCATCAGCGATGGATCAGGCCATGGCCGCCACGTTAGCGGCTATAGAGGTGCCACAACAAAA
TGCTAAGAAGGACGACAAGTCAGAGAGCGCTGTGGTGTTTAAGGATAAACGCGAGGCCATCGAGTCCTTTAAAGAGCTGC
TGCGGGACCGCAATGTGCCATCAAATGCGAACTGGGACCAGTGTGTGAAAATCATATCAAAGGATCCGCGATACGCAGCC
TTCAAAAATCTGAACGAGCGCAAGCAAACATTCAATGCCTACAAGACGCAGAAGATTAAGGACGAGCGCGAGGAGTCTCG
CTTAAAAGCCAAGAAGGCAAAAGAGGACTTGGAGCAGTTCCTTATGTCCAGCGATAAGATGAACTCGCAGATGAAATATT
TTCGTTGTGAAGAAGTATTTGCCGGAACGCGAACATGGACCGCGGTGCCGGAACCGGATCGGCGAGATATATACGAGGAC
TGTATATTTAATTTAGCGAAGCGAGAGAAGGAAGAAGCGCGGTTGCTGAAAAAACGAAACATGAAGGTTCTGGGCGAGCT
GCTAGAGTCGATGACTTCAATCAATCATGCCACCACCTGGTCAGAGGCTCAGGTTATGCTATTGGACAACGTAGCATTTA
AGAATGATGTGACTCTGCTCGGAATGGACAAGGAGGACGCCCTAATTGTCTTCGAGGAGCACATTCGCACCTTGGAAAAG
GAGGAGGACGAGGAACGTGAGCGGGAAAAGAAGCGCATGAAGCGACAGCAGCGCAAAAACAGGGACTCCTTTCTTGCGCT
GCTCGACTCCCTGCATGAAGAGGGAAAGCTCACTTCCATGTCGCTGTGGGTGGAGCTGTATCCCATCATATCAGCCGATT
TGCGATTCTCCGCTATGCTCGGCCAGAGCGGGTCTACACCCCTGGATCTTTTCAAGTTCTATGTGGAAAACCTGAAAGCC
CGCTTCCATGATGAGAAAAAAATAATAAGGGAGATCCTCAAGGAAAAGGCATTTGTTGTCCAAGCGAAGACATCCTTCGA
GGACTTTGCCACGGTCGTGTGTGAAGATAAGCGGTCAGCCAGCCTGGACGCGGGAAATGTGAAGCTCACATACAACTCCC
TGCTGGAAAAGGCCGAGGCCATTGAAAAGGAACGGATGAAAGAGGAGGTGCGAAGGTTGCGGAAACTAGAAAATGAAATT
AAAAACGAATGGCTGGAGGCGAACGTCTCAGTGGCCGAACCCTATGAGAGCGCCAAGAAGCTGGTAGAACACCTTGAAGC
ATTTGCCCTTTATGAAAAAGAAATCGGTGTGGAGAAGATCTGGGAGGACTTTGTTAAGGAAAGCGAAGATGCGTGCAGCC
ATCATCACTCGCGATCACGAAAATCTAAGAAAAACAAGAAGCACAAAAAACGAGTACGGTCCGTCTCGAGATCAGACATC
GAGAATGAGCATATAGAAGTGGAGAAGTCCAAGCGAAGGCGCTCCAAGACACGATCGCATTCCCTGACCTCAATTGGCAG
CATCGAGAGCGAAAAATTGCTGAAGAAGAAAAAGAAGCGCAAGAACAAACTGCGAGGTTCCTCCTGCGAATCGGATGTTC
CAGGCATTCAATCGCCGGGAACTCAAGCTCTACTTCAGAACGACTCAAACTCGCACTCACCCGCAAAGAAAAAGAAGAAG
GAGAAGCGAGCTAAGAAGGACAAGCGACACAACAGGCACAATCGATCCGGCACGCCCCTTAGTCCTGCCCAGTCCGTCGA
GTCGTCTGGATCGCGAAACGAGGAGCTGACGTTAAGTGACGGCGAGCTGGAATCGAAGCGAGCGGCTCTTCTAGCCCAAC
TCAGCGAGCAGCTCGACGAGTGACCAGCTGACAGGCGTTGAGTCAAAGCCGACATCGACATCGTGTGGCACTCTCTAGCT
CTAGCTTAAGGAGGATCGGGAGAGGTAGCTAGCCCTGGACTCAGTTGCTGGACAAGTTCTCTTTTCAGTCCTTGCCTTCC
ACTGCACTCTGCTTCGTTTGGTTTAGATACTGTCCTGGTCCCAGCACAAACCACACAGCGAACCACAATTGTAATTTCTT
AGTCTCAATAAGTTTCAATGTATAAATGAGAATTAAACCTAACGAGTCAAATTTTAAGTTATACGCAAATGATTTTGATT
CTGCATCAAAATAAACAAATTACGAT
      Other Products of this Gene
      Other Transcripts
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Prp40-PA
      FBpp0077333
      806
      Derived from OTHER transcripts
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG3542-RA
      (FlyBase, 1996-)
      Prp40-RA
      Secondary FlyBase IDs
        References (2)