FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Syt1-RC
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General Information
Symbol
Dmel\Syt1-RC
Species
D. melanogaster
Annotation Symbol
CG3139-RC
FlyBase ID
FBtr0077728
Feature type
mRNA
Associated gene
Dmel\Syt1
Evidence Rank
Length (nt)
5110
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 71 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          GTGTGGGCCAAAACGCGAATGAACATCGACCGTGGAAGTTGACTGCTGAAGTACAAAGCGCTAGGCTGAAGCAACAACAC
AGCAAAACAAAATGCCGCCAAATGCAAAATCGGAAACGGACGCCAAACCGGAAGCGGAACCAGCGCCAGCGTCTGAGCCG
GCAGCGGATCTGGAGTCCGTGGACCAGAAGCTGGAAGAAACACATCACTCCAAATTCCGTGAAGTGGACAGGCAGGAGCA
GGAGGTGCTCGCCGAGAAGGCGGCGGAAGCGGCCAGTCAAAGAATCGCACAGGTGGAATCAACAACACGGAGTGCTACCA
CAGAGGCTCAGGAATCCACCACCACCGCAGTGCCGGTGATCAAAAAGATCGAGCATGTCGGCGAAGTGGTCACCGAGGTG
ATCGCGGAGCGCACGGGGCTGCCCACATGGGGCGTGGTGGCCATCATCATACTCGTGTTCCTCGTCGTCTTTGGTATAAT
CTTCTTCTGTGTGCGGAGATTCCTGAAGAAGCGAAGAACCAAAGATGGAAAGGGTAAGAAGGGTGTCGACATGAAGTCGG
TACAGTTGTTGGGATCGGCGTACAAGGAGAAACCTGATATGGAGGAACTCACCGAAAATGCCGAGGAGGGTGACGAGGAG
GACAAGCAGAGCGAGCAGAAGCTGGGGCGCCTCAACTTCAAGCTGGAATACGATTTCAACTCCAACAGTTTGGCCGTGAC
GGTGATCCAAGCCGAGGAGCTTCCCGCCCTGGATATGGGCGGTACCTCGGATCCCTATGTCAAGGTGTACTTGCTGCCCG
ACAAGAAGAAGAAGTTCGAGACCAAGGTGCACCGCAAGACACTGAGTCCGGTCTTCAACGAGACGTTCACCTTTAAGAGT
TTGCCCTACGCCGATGCCATGAACAAGACGCTCGTGTTTGCCATTTTCGACTTCGATCGCTTCTCGAAGCACGACCAGAT
CGGCGAGGTGAAGGTGCCGCTGTGCACCATCGATCTGGCGCAGACAATCGAGGAGTGGCGCGACCTGGTCAGCGTTGAAG
GAGAGGGCGGACAGGAAAAGCTGGGAGATATCTGCTTCTCGCTGCGCTACGTGCCGACCGCCGGAAAGCTAACCGTCGTC
ATCCTAGAGGCCAAGAACTTGAAGAAGATGGACGTGGGCGGATTGTCTGATCCATATGTGAAAATTGCAATCATGCAAAA
TGGCAAACGTTTGAAAAAGAAGAAGACAAGTATCAAAAAATGCACCCTCAACCCTTACTATAATGAGTCGTTCTCATTTG
AAGTACCATTTGAACAAATACAAAAAATCTGTCTCGTTGTGACCGTCGTGGACTACGATCGTATTGGCACCTCCGAACCC
ATCGGCCGCTGCATACTTGGCTGCATGGGCACCGGAACCGAGCTGCGTCACTGGTCGGACATGTTGGCCTCGCCCCGCCG
GCCCATCGCCCAGTGGCACACCCTCAAGGATCCCGAGGAGACCGACGAGATCCTGAAGAACATGAAGTAAGGCGGCAACA
TGGATAACCAAATGCAGACTTACAGCACATCTATCAAACGTATAAATGTAACCAAAGAACATGTACGCGAACCGTCAGAC
ATTGAAATCGAATGCATCATCATCAGCTACAAAACGATCCTCCTCACCCGAAACGACAAGCAACAATCAGCGAAATATCG
TAGTTAATGCAAAAATTGTTCATCTATGCAGTTATCTCAACATAAACATACTGGAACACACAAAATGCCGATTAAGTAAT
ACCATAGGTGTCTAAGTTATATCTCATTGGTTGCGAAAGCAAAGCGAAGTGAAAGCTATGAAATCCTATATAGAAAGCAA
TGTGCAATGTGTCCCTTTCACTGGCCGGAATCCCAAATAGTTCGATCGATTTTACATATAAATCCACACATGAATTCATT
CCGAGATCTATGAATTTGTTGTTGTCCCAAACTATGAAATTTACGAGTATGTTCTTATTAAATGCAAAACTCTATATACT
CAAACTATTTAACGGATGACCGCGAGAGTATGATTTTTAAAGGTTAAGTTTACTTTCGTTTTTAACTTAGTGCAATGATT
AAAGGGATCTTTCCGGTTTTAAATTTGTTTTTCAATCGTTGAAAGATTACTAGTGAATAATATTACTGACTAATGAATAT
ATAAACAAACAAGCAAGCAAAACAAGAACGTAAAGGCAACTTAAACTGTTATGTAAATTATTTATTATGTTTATTGAGCA
TTACGTACTTAACTGTGTAAGTATTAATCTATGTGTGTGTTTAAACGAAGTGAACATGGCAGACATATTAACATGAGGAC
GGAAGGGAAATCATAAAATATATATTATATATAAATATTATGTATAACGACCTAACAGAATCAGACGAATAAGTAGAGGG
GAAACCAAAAAGGAAACCGAAAACCAAAAGCAAATAACAAAAGTTAAACTTTGAAGCGTGATTTCAACGGAATATATCAT
CAGTTTAAACTTAAAGAAAATATCGAACATTTTGCACAATGGATCAGATTGGAATATTCATTTAGTTCGAACAACTTGAT
TTACGCTAACTTAGTAGAAATATGGCTCAGTTTGGGAAAGGTTTCCATTTCCGATAAGTTTATCCCTCGGTTAGCTTTGA
ATTTTCGTTCGAATTCAGATTTTTTGTTCGGTAGCTTCTTCTTCTCGAATATTAAGGTTTCTATTGTACAACTATCTATG
AGTCGTTTTACTCGTTTCCGACTTTATCACATTCCCTGATTTAGAAATCATATTAGGACCTAATGAAAATATACATACTA
ACTAAATGATTATGGCAAAATGTTAAAACAGAAAAAGAAATATTAAGAACAATAATAGTTATTACTATTTATATTATATT
CAAGTATATGACATCTAAACAATATACATTTATATAAACTTGTGCTCCTAGCTGCACAAGCCTACTAAGAATTTGGGATT
TTTAATATGGAAAAGCGGCGGCAGCAAAAACTCTTCTACCTACCTAAAACACAAACTAGCTAATTAAGCTAACTAATCGC
TCGAGAGCCGAGCATTCCATTATTTATAATCCGATATTGAAATCGAAATCGAATTCGAGACGAAGGATTAACAGTGAGCC
ATGATTTTCTGATTTTTTCCATATTGAAAGTAAATGAAATTCAACTAATACATTAGATGTTTTTGTCCTGTAAATGGTAT
ATTATAATGATAATGATAAAGATAAAGCGTAGTTAGGGATCTGTGTATCCCCTGTACACCCACTTACACAGTTGTAGTTA
TGTTCACTGAAGCAGAAGAGTTATGCGTAGGAGTACACAAAGAACAAAGAATGCAAACTTACAAATCGAGAAAATACCAA
AAATATTTATGTAATATAATTCATCTAAATTTAACAAAACGACGTGGACGCCAGGAAGAACAAGTTATGCAACTTATTAC
GAGTATTGTTCAATAAAAATAAATAACTTTGCTTTTCCAAATAATTACTGTAAATTATCTCAAGCCCAAAAACAGCAAAA
TAAGACACAGATACAAAATTCACACACACACACACACACCCACAAACACATATGTATTATGTATTAAAGAAATGGTAAAT
TACTAACCAAAATCGAAGCCTAACCACAACAGCAACAAAATGAAACAAACAAAAGACAACAAACTATATATACTTGCATA
TTAAACAAATTATATGAAATTATATAAAATGATGTTGATTATTGATTTAAATTAAAACTGAGAAAGTGAATAAAACAAAT
TATATATACACCTATATATAAATATTAAACAAAACAAAAGCAAAACTTTTATTTGTGTTTTCCTTTTAGTTGGTATAACT
AATACGAACACAGCGTTACACTGAGCGAAACCAAGTGCAAGTGTTAGCCCAAAAAGACATGTACATACACACCAAACACC
ACACACACACACATGAGAGCAACCACACATGAGAAAACACCCACGAACTGACCAAAAGCAAGTCGAACACATGAATGTAC
TATATTATATATTTTATTATTTTCGAAAACGTTCTCAAAGCAAGCAGAATGCAACGCATAGCCCATCACGAAAGCACAAA
TCAGTAGAGGAAAGGAAGTTAAAGTAAATAAGATACTAAAATAGGCCAGAGATTAATAATGAAAATAAAAACAAAAATTG
AAAAACAATCTAAGTAGCAGTCCATGTACTTTTATTTCCTAGATATGTATATGTATGTAATTTATATTCGAGGTAAATCA
GGCATTATGCATTTAGCAACCAGACAAGAGCATAAACCGCATCTAGGACTCACTATCGAGGCAGATCAAAAGATCAGTAT
CGATCATCCTACCCTTCACCATAGCCACAATCCGATTCCACTGGGATAATCCGTGAGATATATACTTCGCGGAATCGGTT
TAGTATACATATAGAGCGCACCTGAGGGAACGATCGAGTAGCAAGTAAAGATACAAAGATACAAGATATAGAAATATGCG
TTATAGGTTGAACAGACCCAAGATATAGGACAATGTTTGATGTTGATATGAGTTAATATGGCCACCTTGCGTGCGCATTA
TATGCATAGATACGAACATGCATACATACATACATAAATAGTGCAGAAGATAAGCCCTCTGATAGGATCGTTTTATATAC
CCAGTGATCGGAGGAGATGAGGAGAGGAGAGGAGAGTAGAGGAGGGCACCCACATTATACATAACCATCGACAGCACCGC
ATAGTATGAACACAGCATACGGCATATACATACATACTACATAGGTATCAACATAACCGAGCGATATGCATACATATATA
TACACCAGGACATAAGGTCCACGAGTACATTTCCCAGGAGCTATCCATCCTTCGGTTCAGATCCAGACGCTATATACCAA
CATACATATATACCTATACATATATACCTACACGTACAGAAACTCATCCAGCACTTACACTCGCGGATATCATTTTATGA
CTCTTTCCGGAGTTTTGTTGTTTACGATAAACTGTTTATAGCTGTTTTTGAATTTTAAATAAATTATATTTACTATATGG
CAAAACAAAGAGTAACACTAAAGCAAACCCATATATGATAGTAATATGTATATGTTTTAAATACTATTAC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Syt1-RA
          FBtr0077726
          3993
          Syt1-RB
          FBtr0077727
          3987
          Syt1-RE
          FBtr0332218
          5196
          Syt1-RF
          FBtr0332219
          4548
          Syt1-RG
          FBtr0332220
          4593
          Syt1-RH
          FBtr0343993
          3990
          Syt1-RI
          FBtr0345331
          5872
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Syt1-PC
          FBpp0077412
          472
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Syt1-PA
          FBpp0077410
          474
          Syt1-PB
          FBpp0077411
          472
          Syt1-PE
          FBpp0304523
          472
          Syt1-PF
          FBpp0304524
          170
          Syt1-PG
          FBpp0304525
          331
          Syt1-PH
          FBpp0310442
          473
          Syt1-PI
          FBpp0311487
          472
          Comments

          Extended 3' UTR based on EST and RNA-Seq data; may extend into or beyond adjacent transposable element.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          CG3139-RC
          (FlyBase, 1996-)
          Syt1-RC
          syt-RC
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)