FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\5-HT2A-RA
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General Information
Symbol
Dmel\5-HT2A-RA
Species
D. melanogaster
Annotation Symbol
CG1056-RA
FlyBase ID
FBtr0078854
Feature type
mRNA
Associated gene
Dmel\5-HT2A
Evidence Rank
Length (nt)
4355
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 20 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          ACAATCAGTTTGTTTTGAAATTTCGCCGCGATGCGTTCGCTTTCAGAGCGCTCTCTGCACTCTTACAGAAATAATTATTA
AACACGATAAATACTCTAAAAAAAAAAATAATTCAGAAAATGGATACGAAAGTTATTAGTTAAAGATATTACGGAACACC
TTAAACCGATTTTAACGACTGAAATGGGTGAAAGGTACTGCAAAAAGTACTGGTTAAATAATGTTGAATACGCAAGAACA
GTTGTCAGGTGCAGTAAAAGTGTGAAAAAATAAGGAAAAAAGTTTAAAAGGAAACAATTAAATGTGCAAATAACTAAAAT
ATATATGTGCCGTTGCCAAACGACTGCAAAATGTGGGTCTTAGGATAAAGTTTTTACAAATTCATTTAAAGCCTATTCTA
ATTTTAAAATGTGTATTAATAAAGAAACAAATCAAAGAAAGGAAAAGTAAGACAGGCAGCTAATTAAGTTTAGTACAAAA
ACAAACCTTCTTTGTATTGCTCTGTACAACAGACACATCTGCGAGGAGGAAGCCCCACAGCTTTAGAATGAAATGGAGAT
GCAAAGCTACTCTGGTCGTGGACCATCGACAGGCACATCAGAAACAGCAACAGCAACAGCAGCAGTTGCATCTGCATCTG
CATCAGACACAGCAGCAACATTCACACTGCGACACTTCAATTGTCGGCTGGAAGAGGCGGATTGGCCTGGGCCTCGCCAG
CCGTTTATTGACTGCGAAGGCAGCCACACCAACAGCACATCCTACACCCCCAGCAGCCTGCCCACCAGCAAAAACCTCAT
CGAGGGACCCAACAACACATTCCAGTGTGCACGGCAAGCTATCGACGAAGCGGAGCACAACGCATTCTATAGTTGCGATG
GGGAAAGCCCATTGTCTGAAAACTGCACTTTGAGGCTGAAGGCGCGACTGTTGCGATGGCCGTACGAGGCGTATGAGCAC
ATTCGACTGGCAATCAACGGGGCACTCAGTGATTATGCTAGTGATAAACTTAGTGATAGTTCGAGCTGCGATGAAGGAGG
CATGGTGTTGCAATGTAAGCTGGGCCAGGCCCATGAACTATTGCTTTGTCATTTGCAACAACTCGAGAGGGAGCCACTGC
GGGAGGTGGGAAGCGCGGAGGAGAGCTTCTCCAACGACAGCCTTCTGCAGGCCTTTCAAATCGAACTGGGCGCAGAGCGC
GATGGACTCTGGTCCTTCCTTAATCTAAGCGAGCTAATGGAGCCCGATCACGGATTCCTGGGCATCATGAATGTCACCAA
CACTAGCTTAGACATGTTTTTGCCGAACCTTACAGCCCTGAACACGACCTCCACGGCCTCCACTGCAGACATGGCCACCG
AGTTCGCGGTAACAAAGAGCTTTCTGGACTACAGTCCCCACGGCTACGATTTCCTATTCCTGTTCGTGGTGTTCTTTATC
TTCGCGGGTGGCCTGGGTAATATCCTTGTGTGCCTAGCCGTTGCCTTGGACCGGAAACTGCAGAATGTGACTAACTACTT
CCTGTTTTCCCTGGCTATAGCCGATCTCCTGGTCAGTTTGTTTGTGATGCCCATGGGCGCGATACCAGCTTTTTTGGGGT
ATTGGCCACTTGGCTTTACCTGGTGCAACATTTATGTGACGTGTGACGTACTGGCCTGCTCATCCAGTATATTGCACATG
TGCTTCATCAGTTTGGGACGCTATATGGGAATAAGAAATCCATTGGGCTCGAGGCATCGATCTACGAAACGATTGACTGG
TATAAAGATAGCCATTGTTTGGGTAATGGCCATGATGGTATCCAGTTCAATAACCGTTCTTGGTCTGGTCAATGAGAAGA
ACATAATGCCCGAGCCTAACATATGCGTTATCAACAATCGCGCCTTTTTCGTGTTTGGATCTCTGGTAGCTTTTTATATA
CCCATGCTGATGATGGTTACCACATACGCATTGACGATTCCCCTCCTCCGGAAGAAAGCGCGATTTGCCGCCGAGCACCC
GGAAAGTGAACTTTTTCGCAGGTTGGGTGGACGCTTCACCCTAAGGCCGCAGCACAGCCAGCAGCAGTTGCAGATGTTCA
GTAGCTTTTCTGGCAGCAATAACAAATTCCTATCAATGGGCGACGGCAATCGCAACTTCAACACTGAAGGAGAGATGGAG
GAGGGTGGAGCTCCTAGCAGAAGGAGTGGCGTAGAGCCCGCCGAACGACCTTTGATGCAACAGCGAACGGCGAGCAGCAG
GAGCATGGGCACGGTTAGTTTCCGTAATGTCGTGAACGGGACTAGCGGAGCCGCAGGAAGTGGGCGCAGGACGACTGGCA
CTGCCCACAGCAGCTTCCGGTTCTCTGGCGCCGGCATCTTTCGGCACTCGTCGTCGTCTCCCGCCTCGAGCTGCCACTCC
ACCAGCACGTCGCGTTCGAGCTCCTTCTGGCGCAAACACGGCGGCTATCCAAACCTAATGGACAGACTGGCCATACATTT
AAGACTTTCTTTGGTACCACCCAGTAGCCATCCAAATCGACGGGCATCTGTGCGTGTCACCATCTCCCAGCCACAATTGG
GTTACCCGACCAATGTAGGTGGAAATGGAGGTAGAACTGTTGGAGCGACGGAGGTGGGGGCTGGTGGCAATGGCTCATCA
GCCGGCAGAACGAGCAACTCATCTCTTGGAGGCACGAGCTTGATGAAAATCGCAACCATCCAGGGACCGATACTGAACCA
AAGTCAGGCAGCTGGAGGCAATCACATGGTGCAAAAGGTGAAGCCGACGGCTTTAAAACCGGAAGAACCACAGCGCAACA
AAGTGCGGCCCTTTAAATTTGCCTTCAACCGCGTTGCCACGCCCACCCTCAATTTGCGTTTTCTAAACAATCGCAGTAAA
CGAAACAGCTTGTCGGCCAATGCCGTTGCTACGGAGCAGAAGGCCACCAAGGTGCTCGGATTGGTGTTTTTCACCTTCGT
TCTGTGCTGGTCGCCTTTCTTCATCTTGAACATTATATTTGCCGCATGCCCCGAGTGCCAAGTGCCGGAGCACGTGGTGA
ATACCTGCCTTTGGCTTGGCTATGTCTCCTCGACGATCAATCCCATCATCTACACCATATTCAATCGCACGTTCCGGGCG
GCCTTTATCCGCCTGCTCAAGTGCAACTGCAAACGGTGAGTAGTAGAGCAGTGAGAAGTCACTGCAGCCCAGACGCGGAT
CCAGTGCCACAGTAAGAAATTGCCTCTCCCAACCGACGAAGGCACCTCGAACTAAAATTCGTCGCTGCAGGTTACAGTGA
CACAGGGATGCAATTTATTGCTCTAAGAGTGCATTCTGCTGGGAATTAATGTGCAACGTGACGTATGATTGATTTTTGGG
GTTTTGATTTACCAGAGGAATCCAGACAAGAGACGAACTCGGGGTGGTTGTGGCAGCGAATGAATAAGCAGCGATAGGAA
ATCAAACGCTCTCAAAATATATTAAAGGAAGAATAAGTTCGATTGTTTGTATTTAATATGCAGAATGAATGGGAATCTTT
GTAATACGACTTTTATCTATTTTAAAGACTTGCTAGAATCGCCACACATTGTAAGACATAAATTTCGTAAGCATTAAAAA
CAAACTGTGTCGAATGTCAAATTTATTTAAAATGCCTTGTGTTCGAATTAAAAACGTATTGAAAAGTATAGGACATTTAC
CAAGACGAGAGCACTTTTCTGTCACTGACTTCTGCCTTAAAACCCAATCGACTCGAAATGGCTTAAAATGGCACAGCCAA
TAACGTAGTTATTGCCATCCCATTGCAGTTCCGGCCGCCCGCTGCGCTATCGGTCTGTGACAGAAGGACGCGGCGCTCTC
AGCCTGTGCGCCCCTTCGGCCCTGCCGCTGGCCATATCCTTCCAGGGGGCGCCACTTATGACGCCATCTACGGCTAATGC
GACGCCGATGAGCGAGTTCCGCGCCAGCTGCCGCACAGTCACAGACGACGAGTGCTGAACCACGAGGAGCACCATCCAGC
GTCTGGGATGCATCAAATTTATATCGACGTATCGGCAGAAACAAAACGGAGTCCACTGTAATTAGCGGCTTTTCCTAGAT
AACTTCAGGGAGATCAATGCTAACCTTTTCAATCACAATCAATTTGATGAATTTTGTAGATGCTATAGAGAAAATACCTA
ACTTAAGTCTCATCGCATATCATTAGAAACAAAGGAAGGTTCAAAAATATAGTGAGAGAGTTTGCGGTACAACGCGGACT
GTTTTTCACTTTCTCATCAACATTCTAGACTTGGTCATTGCGTTATTTCTAAGTCAAACAAAAAATCATTAACAATAAGT
ACGATTAGTGCAAAATAAAATAAGAAAAAGAAGGT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          5-HT2A-RB
          FBtr0078855
          3722
          5-HT2A-RD
          FBtr0300474
          3178
          5-HT2A-RF
          FBtr0339395
          3541
          5-HT2A-RH
          FBtr0339397
          3683
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          5-HT2A-PA
          FBpp0078494
          868
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          5-HT2A-PB
          FBpp0078495
          930
          5-HT2A-PD
          FBpp0289701
          638
          5-HT2A-PF
          FBpp0308487
          916
          5-HT2A-PH
          FBpp0308489
          917
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          Based on cDNA(s) with retained intron; results in premature stop codon and/or downstream start; may or may not produce functional polypeptide.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          5-HT2-RA
          (FlyBase, 1996-)
          5-HT2A-RA
          CG1056-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)