FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Lim3-RA
Open Close
General Information
Symbol
Dmel\Lim3-RA
Species
D. melanogaster
Annotation Symbol
CG10699-RA
FlyBase ID
FBtr0081170
Feature type
mRNA
Associated gene
Dmel\Lim3
Evidence Rank
Length (nt)
2562
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 1 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CAGTTGCTTTCCAAGCCTCGAAGTTGCCGCTCGGTTTTTTTGCCCGGTCATTCGTGCAGCTAAAAGTTCTGTGATAACGG
TAGACAACAAGCCAAGTCGAAAAATACAAATAAAAAGTAAACTAAATCCGAAATTCGTTAGCGCAAAAAAAAAGTTTTTC
CAAAATCAAGTAAAATGTGGATTGAGCCAACGGAAACCACAAACAATGTGAAACTGTGAAAGTGATGGTTGATTGCTCTG
CATAGGAAAAGAATCCAATCAGAGTGCGTCGGGATTTCCACCGCCAACAACAGTATGGAACTTTTGAAGCTAATGATGTT
CAAAAGTGACTTCCTGTCCAATGGCAAATGTGACGATCGCGTACCGCCGATTAACCTGAGTCAATTGCCAGAGTTCTTGC
TATCCACAATCCCGAAATGCGGCGGCTGCCACGAGCTGATCCTTGACCGCTTCATCCTCAAAGTGCTGGAGAGGACGTGG
CACGCCAAGTGCCTGCAGTGCAGCGAGTGTCATGGCCAGCTGAACGACAAGTGCTTCGCGCGGAATGGCCAGCTCTTCTG
CAAGGAGGACTTCTTCAAACGTTACGGTACAAAGTGTTCCGCTTGTGATATGGGCATTCCGCCCACGCAGGTGGTGCGTC
GGGCGCAGGACAACGTCTACCATCTGCAGTGCTTCCTGTGCGCCATGTGCTCCCGCACCCTGAACACCGGCGACGAGTTC
TACCTGATGGAGGATCGTAAGCTGATCTGCAAGCGGGACTACGAGGAGGCCAAGGCCAAGGGCCTCTATCTGGATGGCTC
GTTGGACGGCGATCAGCCGAATAAGCGTCCGCGCACCACGATCACCGCCAAGCAGCTGGAGACCCTGAAAACGGCCTACA
ATAACAGCCCCAAACCCGCCCGCCATGTACGTGAGCAGCTTTCGCAGGACACGGGCCTGGACATGCGGGTGGTGCAGGTC
TGGTTCCAGAACAGGCGGGCCAAGGAGAAGCGTCTGAAAAAGGATGCGGGCCGCACGCGCTGGAGCCAGTACTTCCGCTC
GATGAAGGGCAACTGCTCGCCGCGCACCGACAAATTCCTCGACAAGGATGAGCTGAAGGTTGACTACGACAGCTTCAGTC
ACCACGATCTGAGCAACGACAGCTACAGCACCGTCAATTTGGGCCTGGATGAGGGCGCCTCGCCGCACAGCATCCGCGGA
TCCTACATGCACGGCAGTTCGAGTCCGTCACAGTATCCGCCGAGCAGTCGCTCGCCGCCGCCAGTTGGGCAGGGCCACAC
GTTCGGCTCCTATCCGGACAACATAGTGTACACCAACATAGATCAAGCGGTCGGGTCTAGTTTGCATGCCAGTAAGGCGC
ATCACCGCCTCCACAGTAGCAACAACGTCTCCGATCTGAGCAACGATTCCAGTCCCGATCAGGGATACCCCGACTTTCCG
CCCAGCCCCGACTCCTGGCTGGGCGATTCGGGCAGCACCAACACGACCAGCGCCAACAACAATGCGAACAACAACAGCAG
CAGCAGCCACAACAACAACAACAGTAGTGGCGGGGGAAGCGGCGGGGTGAGCGTCAGTACCGCCCCCAATCCGTCGGCGC
CCGGCGTACATTACTGATACTCGAATCTGCTCTTGCGCTACTTTGAGATGCAGTCGCGCAGTCTGCTGCTGGCCGCTGCC
CAGCAGCAGCAGCAGCATCAGCCACATTCGTCGCAGCTATAGCAGCGGCATCACACTGAACGCTCGCAACCGCAGCAGCA
GCAGCAACAGAAACAGAAAAAGCAGCAGAAACAGAAAAGGCAACAGCAACAACATTAGAGGCAGCAACATGTGACTTGGC
GAGCTGCAACATCGACTTCAGCAACATGAGCGGAAATGCTTGGCGCCTGAGAAAGGTGGCAACGCTTCGCGTGGCTTTAC
CACACACACACTCACTCACCTACACCACCACACATCCACAACATATTGTTTATGCCCTAAGCCTTCTTAATTTTTGGGAA
GCCTACACCGAAAACAAAAATCCAAAACACAATTTGCTCAAAATCCTTGATTTCACTTCGGTTTGCCAAAAGGTGGGCTT
AGCTTGAAGATACACCTGACACGGCTTGAATGTTACTAGGCGTTATGATTATCTGTTTCGAACGATTACTTCGCTCTATC
ATTTAGATTCGTAGCCCTGATATTTTATTGTAAATATTGTATATTTGTGTATAGTGAATGGAAACTAAAACTGAATTTTA
AATTAATTAAGTCTGTATAGCGTCAAACAAATGCGGGGCATGGCGAGCACAACATTGGTTAGGCCCTGCCCAGAAAAACC
AAAACCAACAAAAACATCAACAAGTTATTTATTGCTTTATATAGGAATACAAGAAAATTGCATAGGAGAAATATCAATTA
CGAAAACGTGATGTCGTATTTATATCTAACGAATAAAAGAATTACAAAAACCAAAAATATTTCAACCAAATAGAAATGTC
AGTAAAAAAAAACAGCAACTACGTAAATGATAAAACGAATGCGATGAAATAAATTACTATTTGACACATAAGAATAAAAG
AC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Lim3-RB
          FBtr0081169
          2677
          Lim3-RC
          FBtr0309832
          3001
          Lim3-RD
          FBtr0309833
          2712
          Lim3-RE
          FBtr0309834
          2284
          Lim3-RF
          FBtr0309835
          3643
          Lim3-RG
          FBtr0329940
          2712
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Lim3-PA
          FBpp0080713
          440
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Lim3-PB
          FBpp0080712
          520
          Lim3-PC
          FBpp0301566
          520
          Lim3-PD
          FBpp0301567
          520
          Lim3-PE
          FBpp0301568
          405
          Lim3-PF
          FBpp0301569
          520
          Lim3-PG
          FBpp0302972
          555
          Comments

          Reporter construct studies indicate that Lim3 is co-expressed with tup in a subset of motor neurons. For the intersegmental nerve, all the ISNb-specific motor neurons express both Lim3 and tup, while those projecting in ISNd only express tup. Lim3 is not co-expressed with tup or ap in interneurons.

          (Thor et al., 1999)

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Lim3-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (3)