FB2026_02 , released June 18, 2026
Transcript: Dmel\Ubx-RA
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General Information
Symbol
Dmel\Ubx-RA
Species
D. melanogaster
Annotation Symbol
CG10388-RA
FlyBase ID
FBtr0083347
Feature type
mRNA
Associated gene
Dmel\Ubx
Evidence Rank
Length (nt)
4282
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 40 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          ACATTCGTTCGATGGCAACGGATTGGATAACAGGCGCGCGCTTTGTTTTATTATCCACATTATCAGCGGCATTATTGTTA
TTATTGGCCCTCAGCGCTTTACCGCTCGCCCACGCGTCCGCCCGTGAATGCCGCGCGGAAAAGTCGCTTTCCACTAGATT
GGCGTCCAGATTCGAGGAAATCCGTCAGCAGACGCATTCGCGCCCGTTCGGTCAGCACTATGGCTAATAATCGTTCAAAT
CGTTAAAACCATAAAAATAATAATAATAATTGCAATAACAATAAACATAGTAATAATCGTAACGCTTACGAGCCTTTGAT
AGTGCCAAGGCAAGCGCAATCCAAGTATTCAAATTCGAATTCAATTAACAGCAAAGTGCAATTGGCTAAAAACCGAAACC
AAAACGCAACAAAGTATACGAAACACTTGTGAAACCGTACAAACAATTGTGGAAAAAAATTTAAAGATTATTAAGATTGA
AGTCTCAATAAACATTAGTGCTTAAATAAATTTAAAACGACCCGCGTGGAGAGTGCAATAAAAAGAATAACTTTTGAAAT
AAATATTTACCAAACAGAAAAATATTTTATAAATATTTAAATAAGTGAAAAACAAATTGGTTACTCTGAAACAAAGAAAA
TTCAAATTGGTGCTAAAACAAAGGAGAAAAAATTTCAAGAATATTTTACAAATAATAAGACATATTTAACTATATAAAAC
CAAACTTAATCAACAAAGACTTGGAGTGAAAATATAAAATAAATTTTAAAAAGAGTTTAACAAAATTTGTTTAAATCCAA
AGGAGGCAAAGGAACAGCACAGAAAGCGAGGAAACACTCAAATAAAATCCGCCAAAAATCGCAGATCCCTGGAAACCAAT
TCGTGTGAAATCGGTCAAGCCCCCAACGACTTTTAGCCCGTCTCAGACGGAGCACCGCCAAGATTCTTACCGCCAGCAGC
GCAATGAACTCGTACTTTGAACAGGCCTCCGGCTTTTATGGCCATCCGCACCAGGCCACCGGAATGGCAATGGGCAGCGG
TGGCCACCACGACCAGACGGCCAGTGCAGCGGCGGCCGCGTACAGAGGATTCCCTCTCTCGCTGGGCATGAGTCCCTATG
CCAACCACCATCTGCAGCGCACCACCCAGGACTCGCCCTACGATGCCAGCATCACGGCCGCCTGCAACAAGATATACGGC
GATGGAGCCGGAGCCTACAAACAGGACTGCCTGAACATCAAGGCGGATGCGGTGAATGGCTACAAAGACATTTGGAACAC
GGGCGGCTCGAATGGCGGCGGGGGTGGCGGCGGAGGCGGTGGTGGCGGCGGAGCGGGCGGAACAGGTGGAGCCGGCAATG
CCAATGGCGGTAATGCGGCCAATGCAAACGGACAGAACAATCCGGCGGGCGGTATGCCCGTTAGACCCTCCGCCTGCACC
CCAGATTCCCGAGTGGGCGGCTATTTGGACACGTCGGGCGGCAGTCCCGTTAGCCATCGCGGCGGCAGTGCCGGCGGTAA
TGTGAGTGTCAGCGGCGGCAACGGCAACGCCGGAGGCGTACAGAGCGGCGTGGGCGTGGCCGGAGCGGGCACTGCCTGGA
ATGCCAATTGCACCATCTCGGGCGCCGCTGCCCAAACGGCGGCCGCCAGCAGTTTACACCAGGCCAGCAATCACACATTC
TACCCCTGGATGGCTATCGCAGGTGAGTGTCCTGAAGATCCGACCAAAAGTAAGATAAGATCTGATTTAACACAATACGG
CGGCATATCAACAGACATGGGTAAGAGATACTCAGAATCTCTTGCGGGCTCACTTCTACCAGACTGGCTAGGTACAAATG
GTCTGCGAAGACGCGGCCGACAGACATACACCCGCTACCAGACGCTCGAGCTGGAGAAGGAGTTCCACACGAATCATTAT
CTGACCCGCAGACGGAGAATCGAGATGGCGCACGCGCTATGCCTGACGGAGCGGCAGATCAAGATCTGGTTCCAGAACCG
GCGAATGAAGCTGAAGAAGGAGATCCAGGCGATCAAGGAGCTGAACGAACAGGAGAAGCAGGCGCAGGCCCAGAAGGCGG
CGGCGGCAGCGGCTGCGGCGGCGGCGGTCCAAGGTGGACACTTAGATCAGTAGATCCTTAGATCCTTAGATCCTTAGATC
CGTAGGGTGTATGTGGGATTGGGCGAAATGACGCGGAGACAGATACAAAGCAACTATATTGTAACAAATGAACTATTTAC
TTAAATGAATAATATTTAAATATTTTGATGGTACTTGTGCGAATACGAAACTTAACCTAAATCGAACCTAATGGAATTAT
TTCAAGCGTTTGAGCAGCAACCGAAAATACGTAAATGAAACAAAACTACAAACTAATTAACTAGGCTAAGTAAATAAAAG
TAGTGGAAGGAGCGCAGATTATAAACCTACTTAGAATTAAATGAGCAAAACAAACAATTTTAATTTAGTTCCAAACGAAA
AAAAAATTCAAGAGGATTCGCTCGAAATGGAAACCTCTGTCCTGCCCCTTTGTTGCTTACTGCTATGTTTAAATTAATTT
CGCGAAAAATACTCAAAAATTGAAACACAAAGAAAACAAAAAATGAAAGTATACCATTATAATGTTGAATGCGAGCAAAA
TTCTGTTGATATGAATTTTTGGTAAAAACATGTTCTAAACCAATTTAAGATACGTAACGAAGGATGCAAAAACAAAATGA
AAACTATTAAACTTTAACTTAAATATAAATAGAATTTGTTAGCCAAGTAAACATATTACGACACGAAGAACAAACGTTTT
CGGGAGTATCGAATATTTGAATGTGTATAGTTTGTGCTTATTAAATAAAATAATGCAATTTTAGTTAACTCTGTTTATTT
GTAAACGAATTTGTTTAGTTCTCGCCCAAACGACTAGAGTGAAGCTGTTTCTTTAAGTAATGTGTAGTGTGTTTACTTTT
TAAATTAAATTAATGCCTAATTTTATTATTATTATGTTTAGTTTAATGACAAGCGTTTATGAGATTATCCGACAGAAGCG
GCGAGAAGAGGAGTGCGACAAACCGTTTGCCCCGGCAAACGCAAATAAATTATTGGTTTTGAAAAAATCTAAAGAAAACA
AAAAAAAAAAACAATGAGAAATCGAATCCGATTGTTGTGTTATTATTTTAGTTCTGCCATTGCGATTTTCCGTTCTCCCA
GTGTAATTAGAGCCTGAGTTGTTTGAGAGAGTCTTCGCGGGCTACCCGCTTGCATGCGAAATTGCTTTTGATCTCGTTTT
GAGCCGTTAATTGATCGTGAGTTGTACGCTCTATAGAGATACCCATACCGATTAGCTATAACGATACCATACCGATACCA
ATACCATATATATAGTTTAGTGGATCCAACGAGCTGTGCTCGACTCAAGCCACAAGGCGCTCCGTGTGTGTGTCCCGATA
ATTGATCCTTCAGTTGAGTTTCCATGGTGGTCCCAGTTGGGGCCGTTCGTAACGAGGTCCTGCAGAAGATGTATACGTAC
TACCGCCTAAGATTCGATTATAGATATATTATATTTATAAATCTTGATATATATTTATGTACTTATGTATGTGGGGATCG
AGTCGAAATGGACAAACAATAAGAGAGTAATTCTGCGGAACGGAACGAAGGCAGATGCAAATACGTAAATAAGAATAAGT
TAAATGTTATAGATTTTAAACGCATATGCGTGGATCGAATGGGATGTCCCCGCCACCGCAAACCAAGAATAGACGCTAAA
ATACAATACATAAATATTTAAACGTGGATTATCGTAGCAACAGATATACGTAAAAGGAAGACGATTCGGTGAGGTCTTGC
ATACAGTACTGCATCCGACCACTTACCTACTACTTACTTACCAGTGCATTCGTAGTAAATAGTTAAATAATCGCTACTTA
CTTGTACATTTGCTAGTGGCTTTTACTTTAAACTCTCTGACCCTCGGCCGAGCAGGCCTATCCATAAGAGACTACTACTT
TTCCTATATACCTACTTCATCCGATCAGATCAGACCTACAGATACTTTGCGGTTACATTTTCTACTTGTAATTTCCCCTC
CCCGCGATCGAAGATTGGACCCGCAGGCTCCGTTCATACTTAATCGATGTAACTCTAATTTAATGCCATTCTATGTTAGC
TCCGTAAGTTGTAAATTATCAATATAAACTACACGTAAAAAGAACAAACACAAAACAAACAGCAACCAGTGAGAATGTGG
AAAATGAAACAAATAAATTAAACAAAACGATTTAAATAATTT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Ubx-RB
          FBtr0083348
          3628
          Ubx-RC
          FBtr0083349
          4231
          Ubx-RD
          FBtr0083350
          2784
          Ubx-RE
          FBtr0083351
          3117
          Ubx-RF
          FBtr0083352
          4180
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Ubx-PA
          FBpp0082793
          389
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Ubx-PB
          FBpp0082794
          346
          Ubx-PC
          FBpp0082795
          372
          Ubx-PD
          FBpp0082796
          363
          Ubx-PE
          FBpp0082797
          380
          Ubx-PF
          FBpp0089155
          355
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          Designated Ubx transcript Ib in literature (FBrf0049816).

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          CG10388-RA
          (FlyBase, 1996-)
          UBXIB
          Ubx-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)