FlyBase Transcript Report: Dmel\Sf3a1-RA

General Information

Symbol

Dmel\Sf3a1-RA

Species

D. melanogaster

Annotation Symbol

CG16941-RA

FlyBase ID

FBtr0083374

Feature type

mRNA

Associated gene

Dmel\Sf3a1

Evidence Rank

Length (nt)

2558

Evidence Score

Genomic Location

Genomic Maps

JBrowse

cDNA Clones Consistent with the Transcript ( 71 )

cDNA Clones, Fully Sequenced

Exact Match

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

cDNA Clones, End Sequence Only (ESTs)

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

RP004347279

Sequence

Sequence Downloader

ATTCCTTCCACCTCTAATTTTCGGCTAAACAAGCGTTTTCTCATTTCTCAAAAAGCAATCAGATTTTATCAATAAAAGAG
GACGATTTCACCAGCCATGGCAACTTTAGACGCGGAAGCCAACGAGGAGCAGTTCGGCAATGATCAGCCCAAGTCGATGT
CGGGTCCAATCATTGGGATTATCTATCCGCCGCCGGAAGTTAGAAATATCGTTGACAAGACCGCCAGTTTTGTGGCTCGC
AATGGACCGGAATTCGAGGCGCGCATCCGCCAAAATGAGCTGGGCAATCCAAAGTTTAACTTCTTAAATGGCGGAGATCC
CTACCACGCATACTACAGACACAAGGTCAACGAGTTCCGCGAGGGCAATGATGCCGGTATCACTGCCCTTGCCAGCATGA
AGCAGCTGGCGGTGACCAGTGCCGCCCAACAGCGCCAGCAAGAGCTTCTCAAGCAAGTGGTGGAGCAGCAGTTCGTACCA
AAGGAACCTCCACCTGAATTCGAGTTCATAGCCGATCCGCCCTCCATTTCGGCGCTGGATTTGGACATTGTGAAGCTAAC
TGCTCAATTTGTGGCCCGTAACGGCCGACAGTTTCTGACCAATCTTATGAGCCGGGAGCAGCGTAACTTTCAGTTTGACT
TCCTGCGACCCCAGCACTCGCTCTTCCAGTACTTTACCAAGTTGCTGGAGCAGTATACCAAGGTCTTGATACCTCCAAAG
GATTTGCTGGGCAAACTGCGTTCCGAGAGCGCACCGGGCAGGAGCAGCATGAACCAGGTGCTGGAGCAGGTTAAATATCG
GGCCAACTGGCAGCGTCACCAAGAAGCACAACGCCGCCGTGAGGAGGAGAAGATCGAAAGGGAGCGCGTGGCCTATGCCC
AAATCGATTGGCATGACTTTGTGGTGGTGGAGACGGTGGACTATCAGCCATTCGAATCGGGCAACTTCCCGCCACCCACG
AATCCCGACGAGGTAGGAGCCCGTGTGCTAATGGAAGAGCGTCTAATGGACGAAGAGGGCGATACAGAAATGCAGATCGA
GTCGGACGACGAGGGCGACTCCCAGGCTAACAACCTATTGGACAGCGGTCTGAAACTCTCGCAAATGGAGAACCGTGTGG
GTATACAAATGAAGAACGTATCGTCGTATGGCCAGCCGACTGGCCCCAAGAGAGACAACACCCAGGTGCAAGACATGGAC
GAAGCCTCTAGTGATGAGGACACTCCAACCACTAAGTTGCAGCCATCTGTTGCGCCAATGCTGCCGCCCACCCACGACAA
AGTGGTGGTCAAGAAATACGATCCTAAGGCAACGCAACCGAAGCAGGCGCCAATGCCTACGGATGAGTATCTCATCTCGC
CGATTACAGGAGAGAAAATACCGGCTTCCAAGGTCTCGGAGCACATGCGCATCGGTCTATTGGATCCACGCTGGGTGGAA
CAGCGAGACAAGCATACTGTGGAGAAAATCAATCAAGACAATGTGTTCGCCGCGGGCACTGCCATCGAGGCGAGTCTCAA
GCAACTGGCTGAGCGTCGTACGGATATCTTTGGTGTGGGCGACGAGGAGACCGTCATTGGTAAGAAGCTCGGCGAAGAGG
AGACGAAGAAGGACGATCGCGTCACCTGGGACGGACACACGTCCAGCGTGGAGGCGGCCACGAGAGCAGCACGTGCAAAT
ATCACTCTGGAGGAACAAATTCATCAAATCCACAAGGTTAAGGGACTGCTGCCCGACGAGGAGAAGGAGAAAATCGGCCC
CAAACCGGTGGGCAACAAGGCGACGCTTTCAGCTCCGCCGCAGCCGTCAACCAAGTCGCAGCACAGTCACTCCAGCCAGA
GTCAACACCACCAAGGTGGCGGAGGTGGTCACCACGGGCATCATAATCCTCATCATCACCATCCACCGCATCAGCAGGCG
CCACCTCACCAGTCGCACCACCATCACCCGCCGCAGCAGCCTCAACCGGTGATGCAGCTGATGCAACTGCGTCCAACCAT
GATGCAGCCGCCTTTTGGAGCTGGTGGTGGAGGCTACATGAACATGCAGCCTGGTGGAATCCCTCAGCAAATTGCACCTG
CTCCACCTGTTGATATAATGGAGGAGGAGCCGCCTTCTAAAAAGATTCGAAGCGAGGACAACCTGATTCCAGAAGCAGAC
TTTATTGCCACCCACAAGAGCCCTGTGACCATTCAGGTTTTGGTACCCAATTCCGACAAATCAGAGTGGAAGCTTAATGG
ACAGATGATAGCCGTGACCATGGCACTTTCTGAACCCATTGCCAATCTGAAGACGAAGCTGCAGGACGAAACTGGCATGC
CACCGGCCAAGCAGAAGATATTTTATGAGGGAATGTTCTTCAAAGACAGCAATACCATGGCTTTTTACAATCTGGTAAAC
GGAACCACGGTGCATTTACAGGTCAAGGAGCGTGGTGGACGCAAAAAGTAGGCGGATCAAAGATTAAAGGCATACCAGAC
ACAATAAGGAGTGGGCCATATATAAAAATTTATTTGTATATGGTTTCGCATAAATTTGTAATAAATCGTCAATCACAG

Other Products of this Gene

Other Transcripts

Polypeptides

Derived from THIS transcript

Name

FlyBase ID

Length (aa)

Sf3a1-PA

FBpp0082817

784

Derived from OTHER transcripts

Comments

GC splice donor site postulated (first exon)

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )

Crossreferences

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

NM_142326

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

CG16941-RA

(FlyBase, 1996-)

Sf3a1-RA

Secondary FlyBase IDs

References (2)

Report Sections

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