FlyBase Transcript Report: Dmel\Syx1A-RA

General Information

Symbol

Dmel\Syx1A-RA

Species

D. melanogaster

Annotation Symbol

CG31136-RA

FlyBase ID

FBtr0084588

Feature type

mRNA

Associated gene

Dmel\Syx1A

Evidence Rank

Length (nt)

2385

Evidence Score

Genomic Location

Genomic Maps

JBrowse

cDNA Clones Consistent with the Transcript ( 76 )

cDNA Clones, Fully Sequenced

Exact Match

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

cDNA Clones, End Sequence Only (ESTs)

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

Sequence

Sequence Downloader

TCACACTCGAAAATTGTTTGCCCGCGCGAGGTGCTGTGTTTCGTTTCGGCTCGCATCGAAATCACACAAAAAAAAACTCT
TGGCCGCCGGGAAAATCGCGAAACAATATTTGGTTTTTTGTGAAAAAAATCAAAAAAATATTGTCAACACATTTGCCTCA
GATAAATACAAAGAAATGTGCATGTGAAACGATTGGTGACAACAACAAATCGTGGAACCCAGACAACCAGTGTGCGAGAG
CGTGATAGGTGGTCGTGCGTCCCTCTCAAACACACACCCTGAATCGGCGCCGACGACGCGTACGCAACAAACGAAAATAA
AACGCAAGCGAAAAGGAGAGAGAAAGAACAAATAACGCCCACCGTAACACCCCCCGCGAATAAGAAGAAGCAAAGTAGAT
AAAGCAGAGAAAGACGAAGAAGCAGCAGCAAAAGCAGACGGCAGAATTGGAGCTTTGCGCAGAAATCGATTTTTTGCCCA
TTTTAAGAGATTTTCGGTAGCCTCTCCCACTGCCGAAAATCGTTTATTGCCACTGCTGCGTGCGTGTTTGTGTATGTGTG
TGCGTGTGCCAGTGCGAAAGTGAAACAAACAAATTCGCCGAGTAAAAGATTAATATTATATGGTACCAGTGTGAGTCACA
AATAACAAGAGAGAAAAAAACAGAAAAAAGAAAAATTAATTCAGCAGCAGCTTTAGCTTTTTAGCTGCTGGCATTGAAGA
GGTGCTCTGCCGCAGTCGACGTCTCTGCCGCCGCCCGCAACACGAGCTCTCTTTGCCTCTCTCTCCGTCTCTCTTGTGAG
CGAAATAACACCACACCAAACGACACACACACGAAAAAAGCATAATAATATTAACCAAAACGCCAGCCAAAGTGCCAGTT
AAGTTATAATTATACACTAAAAGTAAACCGAGCAAAGAGAGAGCTGCCAGCCAAAAGCGGAAAATCAATAAAAGGTCTCT
CGCAAAAGTGGAAAAACGTGCAAACAAGTTAAAAGCAAGGCTGCAAAAAAAGAAAAAGGAAAAACTCCGCGCGCGTTTAC
ACGTGTGGTTTATGTGTGTGTGCGTGTTTAACGTTTAACTGCTAATCGCAAAAACGCAATCTGCGAAGACCGCGTAACAA
AGGCTTACGTAAAGCTTGGCCAAGGGAAAGAGCCAAATAACAACGAAGCATAAAAAACAATATTTAAAAAAATCCAACAA
ATTTTGAAAACTGCACCGTAAACAAGGATAGTCCCAGAAATTCGAAACTCCCCAATTATCAAATCGAGAATAATCTTCTC
GCACACCCTTCAAAAACCAGGATAATACCCCGACACAAAGATGACTAAAGACAGATTAGCCGCTCTCCATGCCGCCCAAT
CCGATGACGAGGAGGAGACGGAGGTGGCCGTCAATGTGGATGGCCATGATTCCTACATGGACGACTTCTTCGCCCAGGTG
GAGGAGATCCGCGGGATGATCGACAAGGTGCAGGATAACGTCGAGGAGGTAAAGAAGAAGCACTCGGCCATCCTGTCCGC
CCCACAAACGGACGAGAAGACCAAGCAAGAGCTGGAGGATCTGATGGCCGACATCAAGAAGAATGCCAATCGCGTTCGCG
GCAAGCTCAAGGGCATCGAGCAGAACATCGAGCAGGAAGAGCAGCAGAATAAGTCGTCGGCGGATCTGAGAATTCGGAAG
ACGCAGCACTCGACGTTGTCACGGAAATTCGTCGAAGTGATGACCGAGTACAATCGCACGCAGACCGACTACCGAGAGCG
CTGCAAGGGAAGGATACAGCGTCAACTGGAGATTACCGGACGACCGACCAACGACGATGAGCTGGAGAAGATGCTGGAGG
AGGGCAACTCGTCTGTGTTCACGCAGGGCATCATCATGGAGACGCAGCAGGCCAAACAGACGCTGGCGGACATTGAGGCC
CGCCACCAGGACATCATGAAGCTGGAGACATCGATCAAGGAGCTGCACGACATGTTCATGGACATGGCCATGCTGGTGGA
GTCGCAGGGCGAGATGATCGATCGCATTGAGTACCATGTGGAGCACGCTATGGACTATGTGCAGACGGCAACTCAGGACA
CCAAGAAGGCGCTCAAGTACCAGAGTAAAGCCCGACGAAAGAAGATCATGATACTGATCTGCCTCACTGTGCTGGGCATC
TTAGCGGCCTCATATGTTAGCAGTTATTTCATGTAAATCTCGAATGCAATTACTTACACGCCACATTCACTCCACACACA
CACCTCTCCACACACACACACATTATATATCTCATCCAGACCCGATCTATATACATAGGATGTTGCGCAACCCACCCAGA
GAAATTGCAGAAGACAAAATCGAAACTTAAACTGTAAGAGACCGCAACCAGTGAACCCCCGATAC

Other Products of this Gene

Other Transcripts

Name

FlyBase ID

Length (nt)

Syx1A-RB

FBtr0303161

2639

Syx1A-RC

FBtr0392904

4164

Polypeptides

Derived from THIS transcript

Name

FlyBase ID

Length (aa)

Syx1A-PA

FBpp0083973

291

Derived from OTHER transcripts

Name

FlyBase ID

Length (aa)

Syx1A-PB

FBpp0292260

296

Syx1A-PC

FBpp0352246

291

Comments

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )

Crossreferences

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

NM_079751

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

CG31136-RA

(FlyBase, 1996-)

Syx1A-RA

(FlyBase, 1996-)

Secondary FlyBase IDs

References (2)

Report Sections

Open Close