FB2026_02 , released June 18, 2026
Transcript: Dmel\Vha100-1-RA
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General Information
Symbol
Dmel\Vha100-1-RA
Species
D. melanogaster
Annotation Symbol
CG1709-RA
FlyBase ID
FBtr0085379
Feature type
mRNA
Associated gene
Dmel\Vha100-1
Evidence Rank
Length (nt)
3000
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 30 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          ACTTGGTAATTAACTAATCGACGTTCATTTCGAAGTGACCCCCTGACAAACTAAATAGTTTTCGGATAAAGCTCGAGCCC
AGTCACTGGCTGACCCCCAACGAGCCGAAAACCTTGGCATCCGGGTCCAACGTAGCACTTTCTTTTTGTCCGCGGCGGAG
AAAAATCAATATACGCATGGGATATCGGGAATCCGGCTGCCACAATGGGTTCCCTATTCCGCAGCGAGGAAATGGCGCTG
TGCCAGCTGTTCCTGCAGAGCGAGGCGGCCTACGCCTGCGTCTCCGAGTTGGGAGAACTGGGATTGGTCCAGTTCCGAGA
TCTCAATCCCGATGTCAACGCTTTCCAGAGGAAGTTCGTCAACGAGGTGCGCCGCTGCGATGAGATGGAGCGCAAGCTGC
GTTACCTGGAGAAGGAGATCAAGAAGGACGGCATCCCCATGTTGGACACCGGGGAGAGTCCCGAGGCCCCGCAGCCCCGC
GAGATGATCGACCTGGAGGCCACCTTTGAGAAGCTGGAGAACGAGCTGAGGGAGGTGAATCAGAACGCCGAGGCCCTGAA
GCGCAACTTTCTGGAGCTGACCGAGCTGAAGCATATTTTGCGCAAAACCCAAGTGTTCTTCGATGAGATGGCCGACAACC
AAAACGAGGACGAGCAGGCGCAGCTGCTGGGCGAGGAGGGTGTCCGGGCCAGCCAACCGGGCCAGAATTTGAAGCTTGGC
TTCGTGGCTGGCGTCATCCTGAGGGAGCGACTGCCGGCCTTCGAGCGGATGTTGTGGCGCGCCTGCAGGGGTAACGTCTT
CCTGCGACAGGCGATGATTGAGACGCCGCTGGAGGATCCCACCAATGGCGACCAGGTGCACAAGTCCGTGTTTATAATCT
TCTTCCAGGGTGACCAGCTGAAGACGCGCGTCAAGAAGATCTGCGAGGGCTTCCGGGCCACGCTCTATCCTTGCCCTGAA
GCTCCAGCCGATCGGCGAGAGATGGCCATGGGTGTGATGACTCGCATCGAAGATCTGAACACCGTGCTCGGCCAGACGCA
GGACCATCGCCATCGTGTGCTGGTCGCTGCGGCCAAGAATCTTAAGAACTGGTTCGTCAAGGTGCGCAAGATAAAGGCCA
TCTACCATACGCTGAATCTCTTCAATCTGGACGTGACCCAGAAGTGTCTGATCGCCGAGTGCTGGGTACCGCTGCTGGAC
ATTGAAACCATCCAGCTGGCCTTGCGCCGCGGAACCGAAAGATCGGGATCGTCGGTGCCGCCAATTCTCAACCGGATGCA
GACGTTCGAGAATCCACCGACCTACAATCGAACGAATAAGTTTACCAAGGCCTTTCAGGCATTGATCGATGCCTATGGCG
TGGCCAGCTATCGGGAGATGAATCCGGCACCCTACACGATCATCACCTTCCCCTTCCTGTTCGCCGTGATGTTTGGAGAT
TTGGGCCACGGAGCTATCATGGCGCTCTTTGGTCTCTGGATGATTCGAAAGGAGAAGGGACTGGCGGCTCAGAAGACGGA
CAACGAGATCTGGAACATATTCTTTGGCGGACGGTACATCATCTTCCTCATGGGCGTCTTCTCCATGTACACGGGTCTTA
TATACAACGATATATTCTCCAAGTCGCTGAATATCTTTGGATCGCATTGGCACTTATCCTACAACAAGTCCACCGTGATG
GAGAACAAGTTCCTGCAGTTGAGCCCGAAAGGCGACTACGAGGGCGCTCCGTATCCGTTCGGCATGGATCCCATTTGGCA
GGTGGCGGGAGCCAATAAGATCATCTTCCACAACGCTTACAAGATGAAGATCTCGATCATTTTCGGTGTTATTCACATGA
TCTTCGGTGTGGTGATGAGCTGGCACAATCATACGTATTTCAGGAACAGGATCTCCCTGCTCTACGAGTTCATTCCCCAG
CTGGTCTTCCTGCTGCTGCTTTTCTTCTACATGGTTTTGTTGATGTTCATCAAGTGGATCAAGTTTGCCGCCACCAATGA
TAAGCCCTACTCCGAAGCCTGTGCGCCTTCAATCCTGATCACCTTTATCGACATGGTGCTTTTTAACACGCCCAAGCCAC
CTCCGGAGAACTGTGAAACCTATATGTTCATGGGCCAGCACTTTATCCAGGTGTTATTCGTCCTGGTTGCCGTCGGCTGC
ATTCCCGTAATGTTGCTGGCCAAGCCGCTGCTCATCATGCAGGCCCGCAAGCAGGCGAACGTACAGCCCATTGCAGGAGC
AACTTCAGATGCAGAAGCCGGCGGCGTGTCCAATAGCGGCTCACACGGTGGTGGCGGTGGCCATGAGGAGGAAGAGGAGC
TCTCTGAGATCTTCATTCACCAGAGCATCCACACCATCGAGTACGTCCTAGGTTCGGTATCCCACACCGCTTCCTATCTG
CGATTGTGGGCGCTTTCCTTGGCCCATGCCCAGTTGGCTGAGGTGCTGTGGACCATGGTCCTATCGATTGGCTTGAAGCA
GGAAGGGCCGGTGGGTGGCATTGTATTGACCTGCGTGTTTGCCTTCTGGGCCATTCTCACCGTTGGCATTCTGGTACTCA
TGGAGGGCTTGTCTGCCTTCCTGCACACCCTGCGTCTCCATTGGGTCGAGTTCCAGAGCAAGTTCTACAAGGGCCAGGGT
TACGCCTTCCAACCCTTCTCGTTTGATGCCATCATAGAAAACGGAGCTGCCGCCGCCGAGGAGTAAATAAAGCGGAATAT
CGGTCAGAGCAACAACCAAAGCACGTTGAGAGTCTCATTGCGTTATATGAAATTAACTATCCAAATAAGTGGAATCTACC
AGTTACAGTAACAAACATATATGTACGTTTTAATGTTTAATTGTCGTGAATTTATCTATGTATGTATATCGTATAGCCCC
AGCAAACGTTAGATTGCTAACAATATTTAATGTTCTTCGTAGACGTTCTCCTGTTTATTAACTATACTTGTAAACTCAAA
TAAATAGAAAAGGCTAACCCCTTGGGGTTGGCACCAAAAG
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Vha100-1-RB
          FBtr0085375
          2907
          Vha100-1-RC
          FBtr0085374
          2959
          Vha100-1-RD
          FBtr0085380
          3009
          Vha100-1-RE
          FBtr0085381
          3066
          Vha100-1-RF
          FBtr0085376
          2898
          Vha100-1-RG
          FBtr0085377
          2944
          Vha100-1-RI
          FBtr0301650
          3052
          Vha100-1-RJ
          FBtr0301651
          2950
          Vha100-1-RK
          FBtr0335405
          2902
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Vha100-1-PA
          FBpp0084748
          833
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Vha100-1-PB
          FBpp0084744
          836
          Vha100-1-PC
          FBpp0084743
          855
          Vha100-1-PD
          FBpp0084749
          836
          Vha100-1-PE
          FBpp0084750
          855
          Vha100-1-PF
          FBpp0084745
          833
          Vha100-1-PG
          FBpp0084746
          850
          Vha100-1-PI
          FBpp0290864
          852
          Vha100-1-PJ
          FBpp0290865
          852
          Vha100-1-PK
          FBpp0307388
          836
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG1709-RA
          (FlyBase, 1996-)
          Vha100-1-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)