FB2026_02 , released June 18, 2026
Transcript: Dmel\Pfk-RA
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General Information
Symbol
Dmel\Pfk-RA
Species
D. melanogaster
Annotation Symbol
CG4001-RA
FlyBase ID
FBtr0088420
Feature type
mRNA
Associated gene
Dmel\Pfk
Evidence Rank
Length (nt)
3217
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 48 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CTAAAATGTCAAAAATCATAAAAAAAAAATGAGTTCAGAAAATGAAAAAAATTGGTAATCTAATAAAAATGTTCAATATT
TAGGAGCAAAATTTAGTTTGGCATGCATTCAATAAAATTTCGAGTATTTACCAAATTAAAACCTATATTTTTGGAAATCA
ATGGACGGATACCCATTTGCCGCCATTTTCATGGTCCTACAACATTTCGCTTAGAAATCTCAAACAAAACACCTCCGATT
AGGCAAAAGCTCACATTTCCAAACATCGGCATCCAATGCACACGAAGTCATCATTTGTGTTGTCCTCGAGATATTTCAGG
AAATACTCTTTTAAGTGTAAAATTTAATTGCAAACGACATTGTATAAAGTTGCGCAGTGATTCTGGTGATCAAAAGAATG
ATAGTCCTGGTGAAAAAAACATACAAAAAGACAAGTCTGCGCAACGATGTGGAAAACCAATAAACAATCTGCACAACGGA
TTTCTTAATGCTGTGAACTATTCTGAAAAGAATGCGGTGAAAAAGAAAAAGAGTGCACCAAAAAGGAAATGTGGCAAATC
GGTGGATGAGCTGCGAAAGTGTTTAAGAACCATGCAGGATGTTATTGATTTTGTACATCCAGTCAAGCCTTTTAAGGACA
AAGGACTGGCGGTCTTCACCAGCGGCGGGGATTCCCAGGGCATGAATGCCGCCGTGCGAGCCTGTGTCCGTATGGCCATC
TATTTGGGCTGCAAGGTCTACTTCATTCGTGAAGGCTACCAGGGCATGGTGGATGGTGGCGACTGCATCCAGGAAGCCAA
CTGGGCCTCAGTCTCATCCATTATCCATCGTGGTGGCACCATCATTGGCTCCGCCCGTTGCCAGGACTTCCGTGAGCGTC
AGGGTCGCTTGAAAGCCGCTAACAACCTGATTCAGCGAGGAATCACCAATCTGGTGGTCATTGGAGGCGATGGCTCCCTC
ACGGGCGCCAATCTGTTCCGTCAGGAGTGGTCCAGCCTGTTGGACGAGCTGGTCAAGAACAAGACCATTACCACCGAGCA
GCAGGAGAAGTTCAATGTCCTGCACATCGTTGGATTGGTTGGCTCCATCGACAACGATTTCTGTGGCACTGACATGACCA
TCGGCACGGACACGGCACTACATCGCATCATCGAGGCAATCGATGCCATCTCCAGTACAGCCTACTCCCATCAGCGCACC
TTCATCATGGAGGTCATGGGTCGTCATTGCGGCTATTTAGCTCTTGTGGGTGGACTGGCGTGCGAGGCGGATTTCATATT
CATTCCCGAAATGCCGCCCAAGGTCGATTGGCCAGACAGGCTCTGCTCTCAGCTGGCCCAGGAGCGATCTGCTGGCCAGC
GTCTGAACATCGTGATTGTGGCCGAGGGAGCCATGGATCGCGAGGGTCATCCCATCACAGCCGAGGATGTAAAGAAGGTG
ATCGACGAGCGTCTGAAGCACGATGCCCGCATCACTGTCTTGGGTCACGTGCAGCGCGGTGGCAATCCCAGTGCCTTCGA
TCGTATTTTGGCTTGCCGCATGGGAGCTGAGGCCACTTTGGCCCTGATGGAGGCCACCAAGGACTCGGTGCCAGTGGTCA
TCTCTCTGGACGGCAACCAGGCGGTTCGCGTGCCGCTGATGGAGTGCGTAGAGCGCACCCAGGCTGTGGCCAAGGCCATG
GCGGAGAAACGCTGGGCGGATGCCGTCAAGCTGCGCGGACGCTCCTTCGAGCGGAATCTGGAGACCTACAAGATGCTGAC
GCGCTTGAAGCCGCCCAAGGAGAACTTCGACGCCGATGGCAAGGGAATCGAAGGATACCGCCTAGCTGTGATGCATATTG
GTGCTCCGGCTTGCGGTATGAATGCCGCTGTGCGCAGCTTCGTGCGCAATGCCATCTACCGCGGTGATGTGGTTTATGGA
ATCAACGACGGTGTCGAGGGTCTGATTGCCGGAAATGTCCGCGAGCTGGGCTGGTCGGATGTCTCAGGATGGGTTGGTCA
GGGTGGCGCCTACTTGGGTACCAAACGCACACTGCCTGAGGGCAAGTTCAAGGAGATCGCCGCTCGTCTCAAGGAGTTTA
AGATCCAGGGTCTCCTGATCATTGGTGGCTTTGAGAGTTACCATGCCGCCGGACAGATCGCCGATCAGCGGGACAACTAC
CCACAGTTCTGCATCCCCATTGTGGTTATTCCATCGACGATTTCGAACAATGTGCCCGGCACAGAATTTTCTCTGGGATG
CGACACCGGTTTAAATGAGATTACGGAGATTTGCGACCGTATCCGTCAGTCGGCACAGGGAACCAAGCGCCGAGTGTTCG
TCATTGAGACGATGGGTGGCTACTGTGGCTATTTGGCCACCTTGGCCGGCTTGGCCGGCGGAGCTGATGCCGCCTACATC
TACGAGGAGAAGTTCTCCATCAAAGACCTGCAGCAGGATGTCTACCACATGGCCTCCAAGATGGCCGAGGGCGTCTCCCG
CGGTCTAATCCTGCGAAACGAGAAGGCTAGCGAGAACTACAGCACGGACTTCATTTACCGCCTGTACTCGGAGGAGGGCA
AGGGCCTCTTCACCTGCCGTATGAACATCCTGGGTCACATGCAGCAGGGCGGCTCACCCACTCCCTTCGACCGCAACATG
GGCACCAAAATGGCCGCCAAGTGTGTCGACTGGCTGGCCGCCCAGATCAAGGCGAACATCGACGCCAACGGCGTAGTCAA
CTGCAAGTCCCCGGACACCGCCACGCTGCTGGGAATCGTGTCGCGGCAGTACCGCTTCTCACCGCTGGTCGACCTCATTG
CAGAGACGAACTTCGATCAACGCATCCCGAAGAAGCAGTGGTGGCTGCGCCTGCGTCCCCTGCTGCGCATCCTGGCCAAG
CACGATTCCGCCTACGAGGAGGAGGGTATGTACATCACCGTCGAGGAGGAGTGTGACACTGACGCCGTCGCCTAAGCGGA
CTCGGATCCGGACTCTGATCCCCACTTCCGCTTATCACCACCATCGCTGCATCGAAGCATCAATGTCCACCTATCCGCAC
CCTCGAATCAGTTTCTGTGTTCGCTTTTTAAGTTGTTTTGGCACCGCATCCGATCCGTTTTATGGTTTTTACCAAGATCA
GACGAAGAGGCCCATGACAGCAGCACATACGAAAGTATTTCATAATCTACAGACGCATAAAAAAGCACAAATACATAACT
TATTTATATTGCTCGCC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Pfk-RB
      FBtr0088422
      3508
      Pfk-RC
      FBtr0088421
      3188
      Pfk-RD
      FBtr0304925
      3217
      Pfk-RE
      FBtr0333067
      3133
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Pfk-PA
      FBpp0087506
      950
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Pfk-PB
      FBpp0087508
      788
      Pfk-PC
      FBpp0087507
      788
      Pfk-PD
      FBpp0293464
      950
      Pfk-PE
      FBpp0305281
      922
      Comments

      GC splice donor site postulated

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG4001-RA
      (FlyBase, 1996-)
      Pfk-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)