FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Ekar-RA
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General Information
Symbol
Dmel\Ekar-RA
Species
D. melanogaster
Annotation Symbol
CG9935-RA
FlyBase ID
FBtr0089102
Feature type
mRNA
Associated gene
Dmel\Ekar
Evidence Rank
Length (nt)
2971
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 19 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTCGTTTCTTTTATGCCGAAGCGGCTGTAGTCGTAATGTTAATAGCAAGCGGCTTCTTACTGTTTCAGTTTCTTTCATA
CGGTTTGGGAGTTCCACCCTTGGTCAGAATTGGAGCTATATTTTCAAACCAGCCTGGAATGTATAACTCGGAGTTAGCGT
TTAGATACGCTATTCATAGACTTAATATGGACAAAAGCCTTTTGCCTGAGACTACCGTTGATTACTATGTTGAATACGTA
AACCGATTTGACTCTTTCGAGACAGTTCAAAAAGTGTGCAAACTTATACGAGTTGGTGTTCAAGCTGTTTTTAGTCCAAC
TGACTCTGTTTTGGCGACCCATATAAATTCAATTTGCGACGCACTGGACATCCCAAACATAGGCCGGTCTGCCCATGACT
TTTCTATTAACGTCTATCCATCGAAGCAACTTGTAAATTATGCCTTTAACGATGTAATACAGTATTTAAATTGGACACGC
TTTGGGATATTGCATGAAAAAGAAAATGGAATCATAAACTTGCATCAGCTATCCCGGTCATTTCACGGAGAAGTTCATAT
GCGACAAGTTTCTCGGGATTCATATGTATCCGCATTGAACGAATTTAAAGGAAAGGAAATACATAATATTATTATTGATA
CAAACTCGAACGGTATTTCCATATTGTTGAAAAATATATTGCAGCAACAAATGAATGAATACAAGTACCATTACTTGTTT
ACAAGCTTCGATTTGGAAACTTATGATCTGGAAGACTTTAAATATAATTTCGTGAACATTACATCGTTTCGATTGGTCGA
CACTGCGGATGTTGGGGTAAAGCAAATCTTGAAGGATATCGGATTGTATAGTCACCATATATTTAAAAAACCTTATTTGA
ATCTACATATTAAAAAATCAACCATTCTTGAGTCAGAGCCAGCCCTAATGTTCGATTCGGTGTACGTTTTCGCGATTGGA
TTGCAGACACTGGAACAATCACACTCTTTAACCCTTTTAAATATAAGCTGCGAGGAGGAAAACTCGTGGGACGGGGGCCT
TAGTCTTATTAACTACTTAAATGCGGTTGAATGGAAAGGTCTGACAGGTCCGATTCAGTTTAAAGATGGCCAGCGGGTCC
AGTTCAAGTTGGACTTAATTAAATTAAAGCAACATTCCATTGTAAAAGTCGGGGAATGGACTCCTCATGGGCATCTGAAT
ATAACTGAACCATCAATGTTTTTCGATGCTGGGTCCATGAATGTGACACTTGTAGTGATAACAATTCTGGAAACACCATA
TGTAATGATGCATTATGGGAAGAATTTTACGGGAAACGAACGATTTTATGGTTTTTGCGTAGATATATTGGAAACCATTT
CTCGGGAAGTTGGGTTTGATTACATACTGGATCTGGTACCGGATAGAAAGTATGGGGCCAAGGACCCCGAAACTGGGGAA
TGGAACGGAATGGTCGCTCAGCTGATGAAATATAAGGCGGACCTGGCAGTTGGATCTATGACTATAACGTATGCAAGAGA
AAGCGTCATTGATTTTACCAAACCATTTATGAACTTGGGGATAAGTATTTTATTTAAGGTCCCAACATCAGAGCCAACGA
GACTTTTTTCATTTATGAATCCATTAGCGATAGAGATTTGGATATATGTGCTAATTGCATATTTTCTTGTGTCTCTCTGC
ATATATATTGTTGGAAAACTTTCGCCTATCGAGTGGAAGTGCATTAACGCCTGCGATCTAGAAAATATTTCTATTGGCAA
CCAGTTCTCCCTAACTGACAGTTTTTGGTTTACCATAGGGACTTTTATGCAACAGTCACCTGATATTTATCCACGAGCAA
TGTCGACTCGAATAATAAGCAGTACTTGGGGTTTTTTTTCACTTATTATTGTCGCATCCTACACCGCAAATCTAGCAGCT
TTTTTGACAACGGAGCGCATGATTAATCCTATCGAGAACGCAGAGGATTTGGCTTCTCAAACTGAGATTTCTTATGGCAC
TCTAGATAGCGGATCTACAATGACATTTTTTCGGGTATGCAACTAGTAAAGTGGCAAATCTTCTTTGATAAGTAAATACA
TTCATTAAGTAGGACTCAGTGATAGAAACTTACAAAAAAATTTGGAGAAGCATGGATAACAAAAAACCATCTGCATTTAC
CACTACTTATGAGGATGGTATTAAGCGAGTAAATCAGGGTAATTATGCGTTTTTGATGGAATCCACAATGCTTGATTACA
TCGTTCAGAGGGATTGCAATTTGACGCAAATCGGAGGACTTTTAGATACAAAAGGTTATGGTATCGCTACACCAAAAGGT
TCGCCTTGGCGAGATAAAATTTCATTGGCTATACTTGAGCTTCAAGAAAGGGGTGACATTCAAATGTTGTATGATAAGTG
GTGGAAAAACACTGATGAAACATGTACTCGCAAAAACACAAGCAAGCAATCTAAAGCAAATTCACTTGGTCTGGAGAGCA
TAGGCGGCGTATTTGTAGTGCTAATAGCTGGAATTATTGTGGCTGCAGTTGTTGCGTTCTTCGAATTTTGGTATAACTTT
CGATACAACTATGAAGCTACACCATCTCAATCAGTCGTTAACAATAAATACAATCAAGATGGGATCCTCGAAAGCGAAAG
AAACTATACCCCACCTGACCGTTCATTTTGGATCGAAATTGCTGAGGAACTCCGCTACGCATCTTGGTGTATGAACAAGC
AAAAGAGGCCTGCACTAACTCGCACATGTAGCAAATGTACCATCCCGAAAGGCCAACGAATTAATAAACTATGAAGGCGT
AATGCTTCTTAGTATTGATGCTTTTTTTTCGATTCGATCTATGTTTTATAAGTTCTAGTTTTTAAAAAGATTCAAGGATT
TAAGAAATTAATTCTAATAAATTACATACATATACTTGGAAATTATAAATTTATAAAGAAAGCTAAAAATATATAAACAC
AATTACAAAAT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Ekar-RB
        FBtr0110906
        2913
        Ekar-RD
        FBtr0344874
        2910
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Ekar-PA
        FBpp0088171
        669
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Ekar-PB
        FBpp0110206
        899
        Ekar-PD
        FBpp0311188
        898
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Based on cDNA(s) with retained intron; results in premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG9935-RA
        (FlyBase, 1996-)
        Ekar-RA
        Secondary FlyBase IDs
          References (2)