FB2026_02 , released June 18, 2026
Transcript: Dmel\Cpsf160-RA
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General Information
Symbol
Dmel\Cpsf160-RA
Species
D. melanogaster
Annotation Symbol
CG10110-RA
FlyBase ID
FBtr0089258
Feature type
mRNA
Associated gene
Dmel\Cpsf160
Evidence Rank
Length (nt)
4845
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 63 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          GATAACTTTGCACCCACAATCGATAGTTCCGCAGCTGCTGTGTGTGTTGGGCCGGCAAATTGTTAAACTGGCTGAAATTG
TTAATAATGTTTTAAGAAATTGCGACACCAATTAAACCACCGCAATGTTTTCGATGTGCAAGCAGACGCACTCCGCCACG
GCGGTGGAGTTTTCGATAGCATGCCGCTTCTTTAACAATCTGGATGAGAACCTGGTGGTGGCGGGCGCCAATGTACTAAA
GGTGTACCGGATAGCGCCCAACGTGGAGGCGAGCCAGCGTCAAAAGCTGAATCCCAGCGAGATGCGTCTGGCGCCCAAAA
TGCGACTGGAATGCCTAGCCACATATACGCTCTACGGCAATGTGATGTCGCTGCAGTGCGTCTCATTGGCGGGTGCCATG
CGGGATGCGCTGTTGATTAGTTTCAAGGACGCGAAATTGTCCGTACTGCAGCACGATCCCGATACGTTTGCGCTGAAAAC
TCTCTCACTTCACTATTTCGAGGAAGATGACATACGTGGTGGTTGGACGGGTCGCTATTTTGTGCCCACAGTTCGCGTAG
ATCCCGATTCCAGGTGTGCCGTCATGTTGGTCTACGGCAAACGGCTGGTGGTACTGCCCTTTCGCAAGGACAACAGCCTG
GACGAGATCGAGCTAGCGGATGTGAAGCCAATTAAAAAGGCTCCGACGGCAATGGTCAGCAGGACGCCTATTATGGCATC
GTACCTGATAGCACTGCGAGATCTTGATGAGAAGATCGACAATGTTCTGGACATACAATTCCTGCACGGCTACTACGAAC
CAACGCTGCTTATACTCTACGAACCGGTGCGAACCTGTCCGGGAAGAATAAAGGTGCGCTCCGATACTTGCGTTTTGGTG
GCCATTTCGTTGAACATTCAACAGCGAGTGCATCCGATTATTTGGACCGTGAACAGTCTACCTTTTGACTGCCTACAAGT
TTACCCGATTCAGAAGCCAATTGGGGGTTGTCTGGTAATGACAGTCAATGCTGTAATCTATCTCAATCAGAGTGTCCCTC
CATATGGCGTCAGTTTAAACAGTTCAGCGGATAACAGCACCGCATTTCCACTGAAGCCACAGGATGGCGTTCGTATTAGT
TTGGATTGTGCTAACTTTGCATTTATTGATGTCGACAAGCTGGTAATCTCGCTTCGCACTGGAGATCTATACGTGCTTAC
GCTTTGCGTTGACTCAATGAGAACGGTTAGGAACTTCCATTTCCACAAAGCAGCCGCCAGTGTGCTAACTAGTTGTATCT
GCGTTCTGCACTCCGAATACATATTTTTGGGATCACGTCTCGGAAATTCCTTATTGCTGCACTTTACAGAGGAGGACCAG
AGCACGGTCATTACGTTAGATGAGGTGGAACAGCAATCGGAGCAGCAGCAAAGGAATCTGCAGGACGAGGATCAGAATTT
GGAGGAAATTTTTGATGTAGATCAATTGGAAATGGCACCGACCCAAGCAAAATCGCGTCGTATTGAGGATGAGGAACTAG
AGGTGTATGGTTCTGGAGCTAAGGCATCGGTTCTTCAGCTGCGAAAATTCATATTTGAGGTGTGCGACAGTCTAATGAAT
GTAGCACCAATCAACTACATGTGCGCCGGAGAAAGAGTGGAATTCGAAGAGGATGGCGTTACGTTGCGACCACATGCGGA
ATCTCTGCAAGATCTAAAGATAGAACTAGTCGCTGCCACGGGTCACAGCAAAAACGGAGCTCTGTCCGTATTTGTAAACT
GCATTAATCCTCAAATCATAACAAGCTTTGAGTTAGATGGGTGCCTCGATGTGTGGACTGTGTTTGATGATGCCACTAAG
AAGTCTTCGCGAAATGATCAGCATGATTTCATGTTGCTTTCACAAAGGAATTCTACATTGGTTTTACAAACAGGACAGGA
AATTAATGAAATCGAGAATACGGGCTTTACGGTTAACCAGCCGACCATATTTGTCGGTAATCTCGGACAGCAGCGGTTCA
TTGTTCAGGTCACCACCCGTCATGTCAGATTATTGCAAGGAACTCGATTAATTCAAAATGTCCCCATTGATGTGGGCTCG
CCAGTGGTACAGGTGTCCATAGCAGATCCCTACGTTTGCCTGCGAGTGCTCAACGGTCAGGTTATCACATTAGCGCTGCG
AGAAACCCGTGGAACTCCTCGTTTGGCTATCAACAAGCATACCATTAGCAGCTCACCCGCAGTGGTTGCCATTTCGGCAT
ATAAAGATTTATCAGGACTATTCACAGTGAAAGGTGATGATATAAACCTGACCGGCAGCTCAAACAGTGCATTTGGACAT
AGTTTTGGCGGCTACATGAAGGCCGAGCCCAACATGAAGGTGGAGGACGAAGAAGATCTGCTCTACGGCGATGCCGGAAG
TGCCTTCAAGATGAACAGCATGGCGGATTTGGCGAAACAATCAAAACAAAAGAACTCGGACTGGTGGCGACGCCTTCTTG
TGCAAGCAAAGCCCAGCTATTGGTTAGTGGTTGCCCGTCAGAGTGGCACCTTGGAGATCTACTCAATGCCGGACATGAAG
CTTGTGTATCTCGTAAACGATGTGGGCAATGGTTCAATGGTTCTTACGGATGCAATGGAATTCGTGCCGATTTCACTGAC
CACGCAGGAGAACTCGAAGGCGGGCATTGTACAGGCTTGTATGCCGCAGCATGCTAACTCTCCACTGCCATTGGAATTGA
GTGTAATAGGCTTGGGTCTAAATGGAGAAAGACCTTTACTTTTGGTCAGGACTCGAGTAGAGCTGCTAATATACCAGGTG
TTCCGATATCCCAAGGGTCACCTGAAGATACGTTTCCGAAAGATGGATCAACTGAATTTGCTGGACCAACAGCCGACGCA
TATTGACTTGGATGAGAACGATGAGCAGGAGGAGATAGAATCTTATCAAATGCAACCAAAGTATGTCCAAAAACTACGAC
CATTCGCCAACGTTGGAGGACTCTCCGGCGTTATGGTATGCGGCGTCAATCCTTGCTTTGTTTTCCTAACATTCCGAGGA
GAACTTCGCATACATCGGCTGCTTGGTAACGGAGATGTGCGTAGCTTTGCTGCCTTCAACAATGTTAATATTCCCAATGG
ATTCCTTTACTTTGACACAACCTATGAGCTTAAGATCTCTGTGTTGCCCAGCTACTTGAGTTATGACTCCGTTTGGCCGG
TGAGAAAGGTTCCTCTCAGATGTACACCAAGACAACTTGTTTACCATCGCGAGAATCGGGTTTATTGCCTAATCACTCAA
ACGGAGGAACCGATGACCAAGTACTATCGGTTTAACGGCGAGGATAAGGAGCTGTCCGAGGAAAGCCGTGGCGAGAGATT
CATCTACCCCATTGGCTCGCAATTCGAAATGGTTTTAATATCACCAGAAACCTGGGAAATTGTGCCAGATGCATCAATTA
CCTTTGAGCCCTGGGAACACGTCACCGCCTTTAAGATCGTTAAGTTGTCTTACGAAGGTACAAGATCAGGACTCAAGGAA
TACCTTTGCATTGGAACTAACTTTAATTACAGTGAGGATATTACCAGCAGAGGAAATATTCATATATATGATATTATAGA
AGTGGTTCCCGAACCCGGAAAACCGATGACCAAATTCAAGATAAAGGAAATATTTAAGAAGGAGCAGAAGGGACCAGTTT
CTGCCATTTCAGATGTTTTGGGTTTTCTGGTGACGGGACTTGGCCAGAAGATCTACATTTGGCAACTTCGTGATGGAGAC
CTTATTGGAGTGGCTTTTATAGATACAAATATCTATGTCCATCAGATTATCACCGTGAAATCCCTGATTTTTATTGCAGA
TGTTTACAAATCCATAAGTTTGCTGCGCTTCCAGGAGGAGTATCGCACATTGTCGCTGGCCTCGCGAGATTTTAATCCTC
TGGAGGTTTATGGAATTGAATTCATGGTGGATAACTCAAATCTGGGTTTCCTGGTGACCGATGCCGAGCGCAATATAATT
GTCTACATGTATCAGCCGGAGGCCAGGGAATCACTGGGTGGCCAAAAACTTCTCCGCAAGGCGGATTATCACCTGGGTCA
GGTGGTAAACACCATGTTTCGGGTGCAGTGCCATCAAAAGGGATTGCATCAGCGACAACCCTTCCTCTACGAAAACAAGC
ATTTCGTAGTTTATGGCACGCTGGATGGAGCTTTGGGATATTGCTTGCCCCTTCCCGAGAAAGTCTACAGGAGATTCCTT
ATGTTGCAGAATGTGCTCCTTTCCTATCAGGAACACCTTTGCGGCCTCAATCCCAAGGAATACCGCACTCTCAAGTCATC
CAAGAAACAAGGCATCAACCCGTCTCGCTGCATCATTGACGGAGATTTAATTTGGTCATATCGACTAATGGCCAATTCGG
AACGCAATGAAGTGGCGAAAAAGATTGGCACGCGCACTGAAGAAATCTTGGGGGATTTGCTGGAAATCGAACGACTAGCC
AGCGTTTTTTAGACATCCTATAGTGTGAAAGATGTAAAGTTTTAGTTGATAGTTGTATTTGTAATTTATGTTACGAGTTT
CCCAATTGTAAATCTAGTTTTATAGGCACAACAAAGTATTTTGTTAAGTAAACTTGGAGTTTCTTATGGTTTTGGTGGTC
TGGAACACAATTCTGAGCGCTATGGCAGCTCGTTGGACTGTATATCAATAATACAATTAAAAATGTATGCTATCTTAAAG
ACAAAAACATGGATGGCCGAAGTATTGGGTCTAATCCTCCAAATAGATTTCTTTCTCTCCAGGGTTTTTTAGCTGTATAT
GGATTTACCTCTCTGTATAAGAGAAGATTGAAGCTGAAGGAATTC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Cpsf160-RB
          FBtr0089257
          4504
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Cpsf160-PA
          FBpp0089163
          1455
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Cpsf160-PB
          FBpp0088317
          1420
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          Unconventional splice site invoked (GG-TT); sequence altered due to transposon insertion; this splice may not occur in vivo.

          transcript_exception: non_canonical_splice_site (invoked due to sequence_alteration)

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          Cpsf160-RA
          cpsf-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)