FB2026_03 , released September 17, 2026
Transcript: Dmel\Pal2-RA
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General Information
Symbol
Dmel\Pal2-RA
Species
D. melanogaster
Annotation Symbol
CG5472-RA
FlyBase ID
FBtr0089500
Feature type
mRNA
Associated gene
Dmel\Pal2
Evidence Rank
Length (nt)
1938
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 25 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      ATATAGACACCGCCAACAGATGTTGGCAGTGAGGAAAATCGAGTGATAGAAGCCAGAACCGAGTCGCCGTTGTTTTGGGT
GAAGAAAATCGCAGGACTTCCAGAAAATGTCGCGTCTCCTGTTCGTGGCGCTGCTAGCCATAAGCTTGGGATATGTGGCG
TCCAGCAGCAGCAACCACCTGCCAGCGGGCTTGGCCATGGACCTGGGACCAGGTGTCAACCTCAACGAGCGCTTCTTCGA
CCAGGTGCGGGCGCTCATCAAGCGGAGGCTCCAGGAGAAGGGGCTCGCGAAGCCGGAACAGCCAGAGCTGGCAATGCCAC
TGACCGACGATGATGCAGTGGCCCTGCAGAACCAACGCAGCTACGACAACGTGCCACTTCCGGCGGCCAGTGTGCCGACT
CCCGTGCTCGTGGAGAACTGGCCCACCGAGCAGCACAGCTTTGGCCAGGTCACCGCCGTGGCCGTGGATCCGCAGGGTAG
TCCGGTGGTTTTCCATCGCGCCGAGCGCTACTGGGATGTAAACACATTCAACGAGAGCAATATATACTACCTTATTGAGT
ACGGGCCCATCAAGGAGAACACCATCTACGTGCTGGACGCAAAGACGGGCGCCATCAAGTCGGGTTGGGGATCGAACATG
TTCTACATGCCGCATGGCCTGACCATCGACTTGCACGGGAATTACTGGATCACGGATGTGGCCATGCACCAGGCTTTCAA
GTTCAAGCCCTTCAGCAACAAGCCTCTGCTGACCATTGGCAAGCGCTTCAGGCCAGGATCATCCGTCAAGCATCTGTGCA
AGCCCACATCCATTGCAGTGGCGACCACCGGAGAGTTCTTCATCGCCGATGGCTACTGCAACAGCCGCATACTTAAGTTC
AATGCCGCTGGCAAGCTGCTACGAACGATTCCCCAGCCACCCGAATTCCTCTCTTTGCAGGTGCCACACGCCATCACCTT
GCTGGAACACCTCGATCTACTGTGCATCGCCGACAGGGAGAACATGAGGGTGGTCTGTCCCAAAGCTGGCTTGATATCCT
CCCACGGTGAGGGTGAACCGGCGGCCACCATCCAGGAACCGGACCTGGGTCGCGTCTTCGGAGTGGCCAGCTTCGGGGAC
ATAGTGTTCGCCGTTAATGGACCCACATCCATGCTGCCGGTGCGGGGATTCACCATCGATCCGCGCTCGGAGACGATCAT
CGGGCACTGGGGCGAGTTCAAGAATCCGCACTCCATGGCGGTCAGTGTCAACGGATCGGCGCTGTATGTGACCGAGATCG
GAACCAATCACCAGACGAACCGAGTGTGGAAGTATGTGCTGGCCTGAGCCTAAGCCTAAGCCAAACCCGAATCCCGAATC
CAGAAGGACACGACTTGCACTGCGCTCCTGCATATCCTTAGACCCATAGACTCATCCCAACTAGTTATCAGCAGAAACAG
AAAGAGAACCACAATCAGAGCCGAATCAAATACAGATTATAGCGATCCTAAGCCTAAGCAGAGCCCACACACCAAGTACA
GTTTAACGTGACCAGTTGTCAGATCAATAGAGAATAGTCAGTGCTTAAGTAATGTACAAGTTAAGTATGTAAATTGCTTG
GAAACAATACCACAACAAACATAACCTCAGACTCTTATGTTTTGCACTTTAATGAGCAAACAAAAACGAAATGAAAACGA
AATTACAAAGCAGCTTAAATAGTACATATACTTAAATGTAATAGTTACGCGTAGGCACTAACTAGGCACGAATGTGAGGA
TGTGGGGACGCGAGCATGGATAACCGATTTCGCAGATAACCGGGGGCAACCAGCGCATATAACATACTTGTGTATCATAT
TGTAACCTATATCAAATATATAATCGTATCTGTATCTTATCAACTTATCGTAGCCCATGTAAATTATGTACGTAATAAAC
TGTTGTTGTTGTGACGTG
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Pal2-RD
      FBtr0301509
      1657
      Pal2-RE
      FBtr0346652
      2304
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Pal2-PA
      FBpp0088497
      406
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Pal2-PD
      FBpp0290724
      406
      Pal2-PE
      FBpp0312237
      406
      Comments

      GC splice donor site postulated.

      Transcript terminates at site supported by polyadenylated cDNA.

      5' UTR based on RNA-Seq data.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (3)
      Reported As
      Symbol Synonym
      CG5472-RA
      (FlyBase, 1996-)
      Pal-RA
      (FlyBase, 1996-)
      Pal2-RA
      Secondary FlyBase IDs
        References (2)