FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\CG5504-RA
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General Information
Symbol
Dmel\CG5504-RA
Species
D. melanogaster
Annotation Symbol
CG5504-RA
FlyBase ID
FBtr0089503
Feature type
mRNA
Associated gene
Dmel\CG5504
Evidence Rank
Length (nt)
1799
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 1 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          AGACATTCGTAGGACAGCATGGATGTTACGGCATGTTGTTGAAAAGCTGAAAATCTGATACTTTTATGGAAAAATGATGA
TTTCGTGTAAAAAATTATTCGTGTTCCGGCAGCTGCCGGCGGTGCGCCGTTGCCTAGCGGCAGCCGCGTTCTCCACGCCA
CGCGCGACCTCCTACCGAATCCTCTCCAGCGCCGGGAGCGGAAGTACCCGGGCAGACGCACCCCAAGTGCGCCGCCTGCA
CACCACGCGCGACCTCCTGGCCAAGGACTACTACGCCACGCTGGGCGTTGCCAAGAACGCCAACGGCAAGGACATCAAGA
AAGCCTACTACCAGCTGGCCAAGAAGTACCATCCGGACACGAACAAGGAGGATCCGGATGCGGGCCGCAAGTTCCAGGAG
GTCTCCGAGGCCTACGAAGTGCTCAGCGACGAGCAGAAGCGCCGTGAGTACGACACCTATGGCCAGACGGCGGAAAACAT
TGGTCGCCAGGGCGGCGGATTCCCTGGCGGAGGAGCCGGTGGCTTTGGCCCCGAGGGTTTCTCGCAGAGCTGGCAGTTCC
GCTCGAGCATCGACCCCGAGGAGCTCTTCCGCAAGATCTTCGGCGAGGGCAACTTTCGAACGAACTCGTTCGACGACTTC
GCCGACTCCAAGTTCGGATTCGGCCAGGCCCAGGAGATGGTCATGGACCTGACCTTTGCCCAGGCGGCGCGCGGCGTTAA
CAAGGATGTCAACGTCAACGTGGTGGACCAGTGCCCCAAGTGCGCCGGCACCAAGTGCGAGCCGGGCACCAAGCCAGGTC
GCTGTCAGTACTGCAACGGCACCGGCTTCGAAACGGTGTCCACTGGGCCCTTCGTAATGCGCTCCACTTGCCGCTACTGC
CAGGGCACGCGGCAGCACATTAAGTATCCGTGCAGCGAGTGCGAGGGCAAGGGCCGCACGGTCCAGCGCCGCAAGGTCAC
CGTGCCGGTGCCGGCTGGCATTGAGAACGGGCAAACGGTGCGAATGCAGGTGGGCAGCAAGGAGCTGTTCGTCACGTTCC
GCGTGGAGCGGAGCGACTACTTCCGGCGCGAGGGCGCCGATGTGCACACGGACGCGGCCATATCCCTGGCCCAGGCGGTG
CTGGGCGGCACTGTGCGTGTCCAGGGCGTATACGAGGATCAGTGGATCAACGTGGAGCCGGGCACCTCGTCGCACCACAA
GATCATGCTGCGCGGCAAGGGTCTGAAACGCGTGAATGCCCACGGACACGGCGATCATTACGTGCACGTCAAGATCACGG
TGCCATCGGCAAAGAAGCTGGACAAGAAGCGACTGGCTCTGATCGAGGCGTACGCCGAGCTGGAGGAGGACACCCCCGGG
CAGATCCACGGAATCGCGAATCGCAAAGACGGCAGTAAGCAAGCAACGAGCGAGTGAGGAGCCAGGAGCGGGAGCAGCTG
CTAAAGCCAGTGCAGCAGCCGCCGGATCAGGAGCCTCCAAGCCAGGACCAGGAGCAGAAAAAAGCGAAGGCAAAGACCAG
TGGACGGACAACGAGAAAACCAAAGCGAAAGAAGGCGGCGGATCCGGATCCGGACAAGGCGACGGCGGAGGCGGAGGCTT
CATAAGCAAGATCAAGTCCATGTTCAACTGACAGGCGTTGGCAACCCGATGGCCGATTCTGTTTTTTTAGTGTCTAAGTT
AACGCACGTTATTGTTGCTAATCTAAGTTCGGGCGGGAACCGGGGGAGTGTATTCCAAATACGACTCGGTTCGAGATGAA
TAAACCAAATTGACCGTCAGTCGGGCAAGTTCTGCGTTT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          CG5504-RB
          FBtr0089504
          1804
          CG5504-RC
          FBtr0089505
          1959
          CG5504-RD
          FBtr0306253
          1786
          CG5504-RE
          FBtr0344995
          1505
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          CG5504-PA
          FBpp0088498
          447
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          CG5504-PB
          FBpp0088955
          520
          CG5504-PC
          FBpp0088954
          507
          CG5504-PD
          FBpp0297363
          514
          CG5504-PE
          FBpp0311249
          445
          Comments

          Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

          Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG5504-RA
          (FlyBase, 1996-)
          l(2)tid-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)