FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\tra2-RA
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General Information
Symbol
Dmel\tra2-RA
Species
D. melanogaster
Annotation Symbol
CG10128-RA
FlyBase ID
FBtr0089617
Feature type
mRNA
Associated gene
Dmel\tra2
Evidence Rank
Length (nt)
1376
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 18 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TCCTCACCTATCGCCACCCCTGTTGAAGCGTGCGTCTTTCTAAACGCAGACAGAATAAATAAAACCTGCCAAAGGCTATC
AATTAATTGGTAAACACTGATTGGGTGTGCAATATAGCAGGGAATCAAACCCTCAAAAATGTTTCGATAGGTAAGCAAAA
AGCCAATGGATCGGGAGCCACTCAGTAGCGGGCGTCTCCATTGCAGCGCCAGATATAAACACAAGCGATCGGCGTCATCA
TCGTCAGCGGGGACAACTTCATCCGGACACAAGGACCGCAGGTCTGACTACGATTACTGTGGCAGTCGCCGGCACCAGCG
GTCCTCCTCTCGCCGACGCTCCCGTTCGCGTTCCTCCTCGGAGTCGCCGCCACCGGAGCCGCGTCATCGCTCCGGACGTT
CATCACGCGATCGCGAACGAATGCACAAGTCTCGCGAACATCCACAAGCAAGCCGCTGCATAGGAGTCTTTGGACTGAAC
ACAAATACCTCGCAGCACAAGGTACGCGAGCTGTTCAACAAGTACGGACCTATCGAACGCATCCAGATGGTGATTGACGC
ACAAACACAGCGTTCCCGGGGCTTTTGTTTCATTTACTTTGAGAAACTCAGCGATGCCCGCGCGGCTAAGGACAGCTGCT
CCGGAATAGAAGTGGATGGTCGCCGTATTCGCGTCGATTTCTCTATAACCCAACGGGCTCATACCCCAACTCCGGGTGTG
TATTTGGGTCGTCAGCCGCGTGGAAAAGCTCCACGCTCATTTTCACCGCGTAGAGGACGCCGTGTGTATCACGATCGCTC
CGCTTCGCCCTATGACAACTATCGTGATCGCTATGATTACCGCAACGATCGCTACGACCGTAATCTCCGCAGGAGCCCTA
GTCGCAACCGTTACACTCGCAACAGGAGCTACAGCCGTTCACGCTCTCCGCAACTACGTCGAACTTCATCGCGCTATTAA
AGCGCCTGGGGAGGAGGCTACTTCATTAACTCGTGCTCCTAAGTTCGCCCAACTGGATTGTGTCAAACGGGCTGTAAAGG
AGCATACGACTGAAATATTGTTTTGGTGAATCCTATCCCATCTAATGCATTTGGTTGGCGAACAGTTCGCAACTAGATTA
ATTAATTATTCACCCAAAACACCCTTTAATCATAATAATTCGGTTACTATTATTAATGCTGTATAAAAACATAAATTGTA
AATATCAAATCAATTACCAACATTACATACAGAGGTCCGCATGGATTGTGATATGTATTTTAAAGGAACTGCAGCAAACT
GATAATGATAACATTAAACTAATTTTAATTATAAATGCAATTGTGCAGCAGGTACAAAATAAAGATTAATTTGTACAGAA
GCGACGATTAACTTGT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      tra2-RB
      FBtr0089618
      1405
      tra2-RC
      FBtr0089619
      1568
      tra2-RD
      FBtr0089615
      1228
      tra2-RE
      FBtr0089616
      1460
      tra2-RF
      FBtr0089620
      1381
      tra2-RG
      FBtr0089621
      1391
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      tra2-PA
      FBpp0088562
      264
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      tra2-PB
      FBpp0088563
      136
      tra2-PC
      FBpp0088564
      226
      tra2-PD
      FBpp0088560
      226
      tra2-PE
      FBpp0088561
      179
      tra2-PF
      FBpp0088947
      264
      tra2-PG
      FBpp0088946
      264
      Comments

      Transcript found in the soma of both sexes and in the female; transcript Type A in FBrf0051860.

      Transcript terminates at site supported by polyadenylated cDNA.

      Type A and type B transcripts initiate at several non-sex-specific transcription start sites. Three closely spaced splice acceptor sites (x, y, z) are used in splicing exon 1 to exon 2; although y and z are similar to eukaryotic consensus splice acceptor sequence, x is not. Nuclease protection experiments show that acceptor sites y and z are used in type A and type B transcripts.

      (Mattox et al., 1990)
      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (3)
      Reported As
      Symbol Synonym
      CG10128-RA
      (FlyBase, 1996-)
      tra2-RA
      (FlyBase, 1996-)
      tra2+R1.7
      (FlyBase, 1996-)
      Secondary FlyBase IDs
      • FBtr0002065
      • FBtr0002066
      • FBtr0006614
      References (4)