FB2026_02 , released June 18, 2026
Transcript: Dmel\Mhcl-RF
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General Information
Symbol
Dmel\Mhcl-RF
Species
D. melanogaster
Annotation Symbol
CG31045-RF
FlyBase ID
FBtr0110973
Feature type
Associated gene
Evidence Rank
Length (nt)
6509
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 40 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        CTCGGGGCTTGTTGTTGTCGGGCGGCTCGCAGTCGCTGCGCTTGGAGCTGGGCCGTCAGTATGCTGAAAACTTTGCCAAG
        GTTCGGTACGGAAATCGAAGTCGAGGAAAGACTGCGCGACGCCCACGGCGAACTCCGATGTTGTTAGCAGTTGTAGTGCC
        TGGTGCCTGGCGGAGTGGATTTTGGTGTTTTGTGCGCCATGACGATTACGATTCTGGTTGTCATTCGGTCTGGACTGGCT
        TTAATTCATAACTCGCTGGCGTCGTCGCGTTCGTGACTTGAGTCTTGCAGTGCAATCTATCAATCAGCCCGGGTTGGTTC
        GATCGATCGATGATTGGCCGTTTTCAGGCGCGCAATTGTCTAATGTCAAAGCGCTAAGTGCTCCAGCCACATAAAGCTAA
        CAGTTCCAAGGTTCCGCGGGCGCTCCAGTTACCTAATCGTCGCCTACTTCCCGCTCCGCTTCAGACTCTGGCTATTGTGT
        ATCTTCGCATCAGTATCTGTATCTGTTTCTATATATCTGTTTACTGTTTGCTAATCCGCTCTGGTCATGCTCCGCAAGCT
        GGCCATGACAATTGTGTGTGCCCAGTGATCGCATAACAGCCATGTTCCTCAAGCCGAAAAGCTTTGAACAGTCGCTGCGC
        GGCGGTATCGTTCCGGCTGTGCCAGCCGCTCCAGGATCGGGCCTCAATCCAAATTTCCATAAGGGTTGTACGGGCAAGGC
        GCATGCCTGCGGCACAAACAAATCCCATCGAGCCGGAGGATCAGCGACTTCAGCGTCTGGAGGATCCAGGGCTGGCAGAC
        AGACGCCTAAGGCTCAGAGAAAGAATAGCATCAGTTCGGAGACGATTAGCGAAAGTGGTTCGGAGAACTCCAACAGCTGG
        CCATCCTCCTCATCGGCAGCCGTGCCAGCTACCGTTCCGCCACCGAAACCTCCGCGTCTGGCGGCCACTAAAGCTAAGGA
        AGCCGCTGCCATCGACTGCTCTCCCGTACAGCCTCCTTTTACCCCAACCTTCGAGCGCTCCACGAAACGCTCGCTCAGCT
        TCAGGAGCAACAACAGCAAGACAACGGAGGCGAAGCTTACTCCGGGAGCCAGTTCCTCTATCCGTCCTCCGTGGAATATT
        TCCGCCGCCGCTGCATCAAAGTACGCCGCTGCAGCCGCCAGTGCTCCACAGTCGCCGAATCCTAGCACGAGGAGCTCTTT
        CCGACGACGCCGTGATGCCCAGAACGCTGGTCTCCATTGGCCGGCCATTTTGGCCAGTTCCCTGGCCGCCAGCCATAAAA
        ACTACGATGCAATTTTAAAGCAAAAGAGCCGCCATGAGAATGGCAATGGCGGAGGAGAAGAGGGAGGAGCCAAAGGAGTG
        GGCCACGATCTGGAGGCGGATGTTGCGGATGCCAGTCAGCCGGAGCGCGTATGGCTGGTGCACCGCGGTGGTTTCACTGC
        CGCCATCCGTCTGCCGACTGCGTCTTCTGGCCGGGATGAGGAGAACAAGCTAAGCCTGCGCCTCCTGCATAATGGGGAGC
        AGCTGACCGTCGACGAGGACGATGTCGAGAAGCAGAACAGCCCCGCCCTGGACCTTGTCGAGGACATCTGCGAGCTGAAG
        TATCTGAACGAGGCGTCCGTGCTCCATTGCCTGCGTCAGCGATACGCCAGCAATCTCATCCACACCAAGGCGGGGCCCAC
        GCTGCTCGTGGTCAATCCCATGGCACCGCTGTCCCTGTACTCCGAGAAGGTTGTCTCCATGTTCCGCGGCTGCAAGACGG
        AGGATATGCCGCCCCACGTCTATTCACTGGCCCAGACCGCCTACAGGAGCCTGGTCGAGACGCGGCGCGACCAGAGCTTG
        ATATTCATGGGCCGATCTGGTTCTGGCAAATCCACTAGCTTCAAGCATGCACTCAACTACCTGGCGTTGGCAGCTGGTGC
        CTATAATAATTTTATAAACGCGGAGAAGGTCAATGCCCTGTGCACCATTCTGGAGGCTTTTGGAAATACGAAAACTTGCC
        TAAACTCGAATGCCACGCGGATGACGCAGCTGTTAAGCCTGGATTTCGATCAAACCGGCCAGATTGCATCTGCCTCATTG
        CAAGTTCTCCTCCCAGAAAGACAACGAGCTGGCCGACGACTTGGTCATGAACATAGCTTCCACATCATGACGAGACTTTT
        GGCTGGCGCTGCTGGCTTGCTACAGAAGGAGCTGCACCTGGAGAACATAACCTCTGAGGACAGCCATCCTTTTATATCGT
        TATCCCAAAAGCTGGAAGATCGGCATCGAGCTGCCAATGACTTTATGCGCACTGTTCAGGCCTTTGAGACGCTGAACATT
        GATGCGAAGGCGGTACGTGGGATCTGGAGCATTTTGGCGGCCATTTACCATCTGGGCATTGCTGGCGTCACAAAACTGGG
        CACTGGCTCCACAGCCCGAACTCAGTTTGCCAATCCCACGGCCGCCCGAAAGGCCTCGGGCTTGTTGGGCGTGAATCTGG
        AGGATCTGTCATCAGCTGCCTTTGGTCTTACCCAACCAAACGCCCCCAATGGCGGTCTGAGTCCATCGAAATCGCCCACC
        TCGGACACTGGACACGAATGGGCCTGGGAATGTCTCGAGGCGTTGGTCATTGGTCTATATTCGGAGGCCTTGGCTGCAGT
        GGTGGCATTGATCAATCGTCAGATCTGCACATCGTCCCACACCATAGCCTCAATTATGCTAATTGACACGCCCGGCTTCC
        AAAATCCAGCCAGCTGTGGCCAGCAAGTGGGTGCTACTCTAGCGGATCTGCGTCACAACTATCTACAGGAGCGTCTACAG
        ATGCTCTTCCATCACACCACACTGGTGGCTCCCCGCGATCGCTACGCCCAGGAGCTGGTAGAAATCGAGATGGACCTGGC
        ATCGGAGTGTCATCCGGGACCGTTGATCTCGCTTATCGACAAGGCACCTCAGAATCATGTAGTGCGCTCGTCCCAGCGAG
        ATTTGCGAGAGCATGATCGTCGAGGAATGTTGTGGCTACTGGATGAGGAAGCTATCTACCCCAACTCCAACGATGACACA
        TTCCTTGAACGTTTGTTCTCCCACTACGGTGACCGGGAACATCATAGCCTGCTGCGCAAATGTGCAGGTCCGCGACAATT
        TGTACTCCACCATCTGCAAGGCACCAATCCCGTTCTCTACGCTGTCGATGGATGGGTGCGTCATAGCCGGGAGCACCCAG
        GTATTCGGAATGCTGTATCCCTACTACAGGACAGCAGTCGGGAGGAGATCAATCGCCTATATATCGGCTCACTGACTCGA
        GGATCGGGAGCAATGGTGTTTTGTGGCTCTTTTGCTGGACTGGAAGGCACTCAGTCACTTCGTCGCGTGTCCAGTATTCG
        CCGCTCCTTCACAACGGCCGGAGTAAAGCGAAACTCCATAATGCTGCAGGTGAAGTTCACAGTGGATGGAATTATCGACA
        CTTTGCGCCGCACTGGAACTCACTTTGTGCACTGCTATCTGCTGCAACATAACGCAGGCAAACATACCAAGTACACCGCC
        AATGGATCGCCCAGCTCAGCTGCCGGTCAGGTGTCCAGCGAGGAGGAAATGGTCAACGTGCCACTGTTAAGGAGTCAGCT
        ACGTGGTTCACAAGTCCTAGAAGCGGCTCGCTTGCATCGCCTTGGTTTTCCCGAATCAGTGCCATTGTTGGAATTTGTCA
        GGCGTTTCGGGCTTTTGGCCGGGGATTTGGCTAGCAATAAGGATGTGAGCGTGGAGCAGATATTAGCTGTCAATGAACTG
        GATGTGGCCAGCTATCGCATAGGACCCAGCCAGATCCTCTTCCGCTCAGGAGTTCTTAGTGAACTGGAAGCCAAGCGCGA
        TGTCCTGCTCTCAGATCGCATTATACAGCTGCAAGCATTTTGCCGCGGCTACTTGGCACGCAAGAAGATGTCCCAACGAA
        GGGTCCAGGAACTGGCAGTGCGTTGCATTCAACGCAATGTGAAGGCATTCCTTGCCGTTCGCGACTGGCCGTGGTGGCGT
        CTCCTGGTGCGGGTCACTCCCCTGCTCAACGTTCATCGCACCGAGGAGCAGCTGAAGACGGCTAACGAGGAGCTCCTAAT
        GCTGCGAGCCAAGCTGGAGAAGATCGAGTGTGATCGCAGTGAGGTCAAGGCAGAAAACCAAAAGCTGGAAGCCAAGCTAT
        CCGAGCTGACGGTGGACCTGGCCGAGGAGCGATCCACGGCTCATATAGCTACCGAGCGGCTGGAGGCGGAAACCGCCGAA
        CGCTTGAAGCTGGAGAAGGAGCTGGGCGATCAAACCAACAAGGTGAAGAACCTTCAGGAGACGACGGAGAAGCTGGAAAT
        GGAGCTGATATGCGCCAAGTCCGATCTGAATGGCATCTCTGAGGACGAGGATGCAGAGAACGAGGATGGGGTCGGCGGCG
        GCGTCTACAAGCTTAAGTACGAGCGGGTGGCCAGGGAGCTGGAGTTCACCAAAAGGCGGTTACACACGCAGCATGAGCAC
        GATCTGGAACAGCTGGTCGCGCTCAAGAAGCATTTGGAGATGAAGCTTTCCGATGCCTACGAAGAAGTTGTGGAACAACG
        TCAGGTTGTGGGCCAATGGAAGCGCAAGGCACAGAAGATGACCAACGAGATGAACGATCTGCGCATGCTGCTCGAGGAGC
        AAAATGCGCGCAACAATTTGCTCGAGAAGAAGCAGCGCAAGTTCGACGCCGAGTGCCAGTCCCTGCAGGATGCAGTGCGT
        CAGGAGCGACAGGCCAAAGAGCGCTACGGTCGCGAAAAGGACGTCCTGCAGGCCGAGAAGTTCACACTGGAGCAAACGCT
        GGCGGACACCCGTCTGGATCTTGAATTCAAGGAGGAGAAACTTGCATCGCTACAGCGCGAGCTGGAGGAGATGACCTTTG
        GTGGCGGCACCGAGGAGGAGTTCGCCCAACTGCGGCGCTCCAAAAATGAAACAGAGCGTCGGGCCAAGGAACAGGAGGAA
        GAACTGGACGAGATGGCCGGTCAGATACAGCTGCTCGAACAAGCCAAGCTTCGCCTGGAGATGACCCTGGAAACAATGCG
        CAAAGAAGCGCGCCGTGAGTCCCAGCAGCGCGACGAAGAGCTGGAAGAAGTACGCGGTAACGGCTACAAGAAGATTAAAG
        CCCTTGAATGCCAGCTGGAAACTGAGCACGAGGAGCGGACTCTGCTGCTGCGCGAGAAGCACGAGCTAGAGCGACGTCTC
        TCCTCCATGGAGGATCGCGATCGTGTTGATCGCGATGCCGAGGAAGCGCTCAACCAAAAACTGCGACGCGATCTTCGCAA
        ATACAAGGCCCTGCTCAAGGACGCCCAGACACAGTTGGAGCGGCTTAAGGCTGACACGCCTGGCAAGACGCTTATAAGAC
        AACTGCGTAATCAACTGGAGGATGCCGAATCTGCTCGTTCGCTGGCTATGAAAGCGCGACAAACTGCGGAAGCCGAACTT
        ACTGAAGTGCAGGCCATGTTCGATGAGTCGCATCGAGCTAGGAATGACGCGGAGGAGCGAGCCAATGCCGCACACAGAGA
        TCGGGCTGAGCTGCAGGCCCAGATCGAGGAGAACGAGGAGGAGCTGGGCGAGCTGATGAAGAAGTACAGCGCCACGGTAA
        AGCAACTAAATACAGAGCAAATCAACGTATCCGAGGCTGAGTTTAAACTCAATGAAATGGAAGCAGAGCGCAATAACCTC
        AAGGAGCAGGTGGCCGAGCTGCAGCACCGACTGGACAACGTTGAGAACTTGGGGGATCCATCTATGGCCATGATGTCCAA
        GCGACTGGAGCTGCGCACCAAGGAATTAGAGTCTCGACTGGAACTAGAGCAGGCCACTCGGGCTCGCCTTGAAGTGCAGG
        TGAACCGTCACAAAGAGGCTCTGGAAAAACTGCAGAACGAGGTGACGCAGTCAAAGATGCGTGAGATGCAGGCCCAGGAT
        GTAATCAAAAAATCGCAAAAGAGTCTGCGCGACATGCGCGAAGAGTTCCACGCTGTCTCCAGCCGCGAGCAGGAGTCGCT
        CACAAGGCGCAAGGACCTGGAGAAGAAGGTGGAGCAAATGGAGTCGGAGGGAGCGGCGCTTAAAAACGATCTACGACTGG
        CTTTACAGCGAATAGCTGATCTACAGCAGGCAATGGAGGAAGAGGGCGAGGAGGAGCTGAGCGAAAGTGATGAAAGCCTC
        AGTTCGGTGGGCTCTATCAGTGATCTGGAAGATCGACTTCGGCCAGTTCATGTAAAACGCAGCTCACAGCAGTCCTTGAA
        CGGCAGCATCGGCGGCGGAGGCGGAAGCGTTGTCAGCTCCACCCGCACCGTGGTGTTCGAAAAGGACGACAACAGCCCGA
        GGTACGCTGATAACGAAGTCAACTCGAACAGCAGAAAGCAGCACAAGCATTAAAGGCCCAAGCACACAGCGTAGACTCAC
        TCACCCTCTAATTATCTGACTTTTAATATGCCTATCGCTAGTTAGCTAGTCTGTAAGGTCTGTTGCTATTTGCCGGCTTA
        TCTAATTTAAATAATTAAACCATACATGC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0083229
        6686
        FBtr0083231
        7418
        FBtr0083232
        2923
        FBtr0083233
        4004
        FBtr0110974
        6782
        FBtr0303845
        2015
        FBtr0332439
        3941
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0110273
        1923
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0082683
        2148
        FBpp0082685
        2194
        FBpp0082686
        920
        FBpp0082687
        1134
        FBpp0110274
        2160
        FBpp0292853
        533
        FBpp0304712
        1113
        Comments

        Conservation across Drosophila species: The alternative first exon of Mhcl-RF is supported by multispecies conservation, an Exilixis EST, and gene prediction.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        Mhcl-RA
        Mhcl-RF
        Secondary FlyBase IDs
          References (0)