FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\α-Man-Ia-RJ
Open Close
General Information
Symbol
Dmel\α-Man-Ia-RJ
Species
D. melanogaster
Annotation Symbol
CG42275-RJ
FlyBase ID
FBtr0300511
Feature type
mRNA
Associated gene
Dmel\α-Man-Ia
Evidence Rank
Length (nt)
4132
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 28 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TGGAAAAAGCGGCGGGCACATTGTGGATCGGATCCAAGCTGTTTTTGGTCGTCTCGAACTCAAAAAAAGAAACGTAAATC
CAGCGGAATTAAACGCGATTGTGGAAGGCGTCTCGTTCTTGTGATACCTCTGCCGTGAATCGATGGTCGGTTTGCGGAAA
ATAATAAGGTGGCAGGTGAAACGCGCATTCCCCTCTCTCTCGCACAAACACACCTCCTGCCAGGAACGGAAAGTAACAAC
AAAAACAACTGGAAGAAGCGGCTAAGGTGGAAGCGAGATAGAGGTAGCTGGATGGATGCTAGTGTGGGAAAGGAGAGCGA
AGAGAAAGAAACTGAGAAAACATAAACATAACTTAAATTAAAAAGTCCACCGCCAATGCCCGAGAAGACTACAGTGAAAC
AATAATACAAATAACCCAAAACAATCAGTTAAATCGAATTGAAGCAAATAAACAATCGATCATGTATCGCATCAGTCCAA
TTGGACGCAAATCGAACTTCCACTCGCGCGAAAAATGTCTGATTGGACTCGTCCTGGTAACGTTGTGCTTCCTCTGCTTC
GGCGGCATCTTCCTTCTGCCGGACAATTTCGGCAGCGATCGTGTCCTGCGCGTCTACAAGCACTTCCGAAAGGCCGGACC
GGAGATCTTTATCCCAGCCCCGCCCCTCGCCGCACACGCCCCCCATCGCAGCGAGGATCCACATTTCATTGGCGATCGCC
AACGTTTGGAGCAAAAGATTCGCGCCGAATTGGGCGATATGCTCGATGAGCCACCGGCTGCGGGTGGAGGCGAACCTGGA
CAATTCCAGGTGCTCGCCCAACAGGCTCAGGCTCCAGCACCCGTCGCCGCTCTGGCGGATCAGCCGCTGGATCAGGACGA
GGGACACGCCGCCATTCCCGTTCTGGCCGCCCCAGTTCAGGGGGACAATGCCGCCAGCCAGGCCTCGTCCCATCCACAAA
GTTCCGCCCAGCAGCACAACCAGCAGCAACCACAACTGCCATTGGGTGGCGGTGGCAATGATCAGGCGCCGGACACACTG
GACGCCACACTGGAAGAACGGCGTCAGAAGGTCAAAGAGATGATGGAACATGCGTGGCACAATTACAAATTGTATGCGTG
GGGCAAAAACGAGCTGCGTCCGCTTTCGCAGCGACCCCATTCGGCCAGTATTTTTGGATCATACGATCTGGGTGCTACAA
TCGTCGACGGTCTGGATACCCTGTACATTATGGGACTGGAGAAGGAATATCGCGAGGGTCGCGATTGGATCGAGCGAAAA
TTCTCACTGGACAATATCAGCGCAGAGTTGAGTGTTTTCGAAACGAACATTCGTTTTGTTGGCGGCATGCTGACGCTGTA
CGCCTTTACGGGCGATCCACTGTACAAGGAGAAGGCCCAGCACGTTGCCGACAAGCTGCTGCCCGCCTTCCAAACACCAA
CGGGTATTCCCTACGCGCTGGTCAACACCAAGACCGGTGTGGCCAAGAACTACGGCTGGGCATCCGGCGGCAGTTCTATC
CTATCCGAATTTGGCACACTGCATCTGGAATTTGCCTATCTGAGCGACATTACCGGGAATCCACTGTATCGGGAACGAGT
CCAGACCATTCGCCAAGTGCTCAAGGAGATCGAGAAACCAAAGGGCCTCTATCCCAACTTCCTTAATCCCAAGACAGGCA
AATGGGGGCAACTTCACATGTCATTGGGCGCTCTGGGCGACAGCTACTACGAGTACTTGCTGAAGGCCTGGCTGCAATCC
GGCCAAACGGATGAGGAAGCCCGCGAGATGTTCGACGAGGCAATGCTGGCCATTCTGGATAAGATGGTCCGCACAAGTCC
CGGCGGACTGACATACGTCTCTGATCTCAAGTTCGACAGGCTGGAGCATAAGATGGACCATTTGGCTTGCTTCTCGGGTG
GCCTCTTCGCTTTGGGAGCGGCTACACGTCAAAATGACTATACGGACAAGTACATGGAGGTGGGCAAGGGCATTACGAAT
ACCTGCCACGAGAGCTACATCAGAGCACCCACTCAGCTGGGACCCGAGGCCTTTAGATTCAGCGAAGCTGTGGAGGCGCG
AGCACTGAGATCGCAGGAGAAGTACTACATTCTACGGCCAGAGACTTTCGAGAGCTACTTTGTGCTGTGGCGACTCACGC
ACGACCAGAAATACCGCGACTGGGGCTGGGAGGCGGTCCTCGCCCTGGAGAAGCACTGCCGCACGGCGCACGGATATTGT
GGCCTGCGCAACGTCTACCAGCAGGAGCCGCAAAAGGACGACGTTCAGCAAAGCTTCTTCCTCGCCGAAACGCTTAAGTA
CCTGTACTTGCTGTTCTCGGACGATTCGGTGCTGCCGCTGGACGAATGGGTGTTCAACACGGAGGCCCATCCGCTGCCGA
TCAAGGGTGCGAATGCGTACTATAGACAGGCGCCCGTAACGCTTCCGGTTTCGAACGCATCGTAAACGGGCGCCATGTTG
CGCCGCTGGCTATTCGGCCTGTCCCTAGCAATGCACCTTACTTAGCTCGCGATATTTGGATATCTACACATGTGTGTACC
AGATCGTAACATTTTTTTTTTTTTTTGTTTTGTTTAAGTTATTAGTTAGATTACGTGAGGATGACAACTGCGTACGAAAG
ATATTGTATGTTTACAATCAATCCAGGCACACACACACACACACTCGAGAAACTGTCAATGTAACATATTTATAAAGCTT
GCACATATATAGGAACGTAAACTTAAACGGATATATCGTAGTTTAGTTCTTAACTGTTTGCACAAGTTTCTCCAAGTCTC
TCTTCTTGATTTATCTTATGGAATTAATAGCAATCCAAATAGTTGACAGAGGTGGATGGTGGGAAGACCTCAATTTCCAT
TTAAATGCGAATGACGTAGACGTAGGCAAAAACTCTTGATATTAATTATGATATGATATATAATATGATATACGTGTAAA
TGTAAAACTCAGGTGTTCTTATTATGATTTTCCTTGCGCTCACACAAGGCACTTTTTCAACTAAACCAGCTACGTAACTA
TCTCTACAAGCATTCTATACGCAATTCTCGATCTGCGACTATATCTCTGTGTGGATTTATGGCCACTTGGCGGGCATTTC
GTTAGATCTACTCTGCTAATTTCCAATTCGAATCTTTGACCACTTTATTTTGTATATAATTTCTACTGACTTTCCTCGCA
AAATGAAGGCAGAAGAAAATCGAATTGATATTTATACAAATATATTCTTACACAATATTGTTTACTTTGTAGCCTAAATA
TTTAAATATAAATCTAATATAGAGTCTAGCTTACTGTATGTGACGAAAGAAATGTAACGCAAATTACCTTAAATCGAGAA
CATCAAGCGAAAAGAACGCAAATGAATATATATAAAGTAAAATAAATAAATATATATTTGTATTTAATTAAATCAAATAA
AACGTAGGCAATTGTTAAAATAAATTAATTATACGATGGCACGAGCCGAGCGAATGGTAATTTAATTTTTAACAACTGTA
AAGGTTTTTTATAATAATAATACCAGCAGTAATCATATTTATAATTCTATTTATAACTGTAATCCATAGTCTAAGCCACA
AGGATCGCATGATAAAAGAAATATAGAAGTTATTTAATTGTTTTTTTTTTTTTTTTTGTAACATACACAGCTTGTTCTGT
GTAAAGTGATTTAACAAACGTAAAAATAACATAAAACATAAGCTAAGACCCTAATGTAAAACAAAAGAATTTTAAAGAAA
CATTTTAACAAAATAAAATAATATCAAAATGATTTAACCCGATAAATGAAGAAATCTAATAAACCCAAGCTAACAAACGT
TAAACGAGCTAAATGCTTAAAAAGAATAGGAAGAAAAGAATGAATTCGATACTAATTAAGCATAAATTTAGTCTCTAGAG
CAAACCTTTTTTTGTTTAGATCAAATTAGAAATTGAGGCCAATAGCGAGATATATAATATATCCGATTATAATGCCGAAC
ACACAGATTCGAATGGCAGTTTGTAAATGCATCAGACACAATACATTCATCAATAGCAGTCCCTGAGCTGCTGGAGATGT
CACGTGTATTTTGCCTAAATCATAAGTTTAATAAAGATCTAATAATTAACTT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      α-Man-Ia-RH
      FBtr0299632
      3445
      α-Man-Ia-RI
      FBtr0299633
      4102
      α-Man-Ia-RK
      FBtr0300512
      3710
      α-Man-Ia-RL
      FBtr0300513
      3785
      α-Man-Ia-RM
      FBtr0300514
      3961
      α-Man-Ia-RN
      FBtr0300515
      3853
      α-Man-Ia-RO
      FBtr0300516
      3808
      α-Man-Ia-RP
      FBtr0331759
      3156
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      α-Man-Ia-PJ
      FBpp0289738
      667
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      α-Man-Ia-PH
      FBpp0288907
      667
      α-Man-Ia-PI
      FBpp0288908
      684
      α-Man-Ia-PK
      FBpp0289739
      643
      α-Man-Ia-PL
      FBpp0289740
      667
      α-Man-Ia-PM
      FBpp0289741
      667
      α-Man-Ia-PN
      FBpp0289742
      667
      α-Man-Ia-PO
      FBpp0289743
      667
      α-Man-Ia-PP
      FBpp0304147
      643
      Comments

      Unconventional splice site invoked (CT-CA); sequence altered due to transposon insertion; this splice does not occur in vivo.

      Due to an oversight in the implementation of gene annotation merges, the symbols for this transcript and its associated polypeptide were changed to non-unique designations in r5.8. Although there were no conflicts within a given release, the same symbols were used for different isoforms in different releases. Prior to r5.8 the transcript symbol was alpha-Man-I-RA; from r5.8 to r5.12, it was alpha-Man-I-RB; in r5.13 it was changed to alpha-Man-I-RJ, a symbol that has not been used previously in the database.

      Transcript terminates at site supported by polyadenylated cDNA.

      transcript_exception: non_canonical_splice_site (invoked due to sequence_alteration)

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      α-Man-I-RJ
      α-Man-Ia-RJ
      Secondary FlyBase IDs
        References (0)