FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\grh-RN
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General Information
Symbol
Dmel\grh-RN
Species
D. melanogaster
Annotation Symbol
CG42311-RN
FlyBase ID
FBtr0300541
Feature type
mRNA
Associated gene
Dmel\grh
Evidence Rank
Length (nt)
3181
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 26 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTCAGTCGTATCACGCTGTCGGAGTAGGATCGTATCGCATTCGAATCCGATTCCGTAATAGCCGTTCGCTATTTTCCTC
GCCGCGATCCGTAACACATCGTAGATTGTAACCGAATACCGATCGATCGGAGGGGATCCAAAACGAAATACAACAACCAA
AAAAAAAAAAAAAAATAGACAATCTTGCACGTGGATGCACCAACGGCAAGTGAAGCTGATAGGCCCAGCACACCCAGCAG
CAGCATCAACAGCACTGAAAACACTGAATCGGACTCACAGTCAGTATCAGGATCAGAATCAGGATCGCCGGGAGCCAGGA
CCACAGCCACACTAGAGATGTATGCAACCACGGGCGGCACACAGATCTATCTACAGACCTCACATCCCAGCACGGCGAGC
GGAGCGGGCGGCGGCGCCGGACCCGCTGGAGCCGCCGGCGGCGGCGGTGTGTCCATGCAGGCGCAAAGTCCCAGTCCGGG
TCCCTATATCACGGCCAATGACTATGGCATGTACACGGCCAGTCGCCTGCCACCCGGTCCCCCGCCCACCAGCACCACCA
CGTTTATAGCGGAGCCCTCCTACTATCGGGAATACTTTGCACCGGATGGCCAAGGTGGCTATGTGCCGGCCAGCACGAGG
TCTTTGTATGGCGACGTGGACGTATCCGTATCTCAGCCCGGCGGAGTGGTCACCTATGAGGGCCGCTTTGCCGGCAGCGT
TCCCCCGCCCGCCACCACCACCGTGCTAACCAGCGTGCATCACCACCAGCAACAGCAGCAGCAACAACAGCAGCATCAAC
AGCAGCAGCAGCAGCAACAGCACCACCAGCAGCAACAGCACCATTCGCAGGATGGCAAGAGCAATGGCGGAGCAACGCCA
CTCTATGCCAAAGCCATTACGGCGGCGGGTCTAACGGTGGATTTGCCAAGTCCGGATTCGGGCATTGGTACGGATGCCAT
TACACCGCGGGATCAGACAAATATCCAACAGTCCTTTGATTATACGGAATTGTGCCAGCCGGGCACGCTGATCGATGCCA
ATGGCAGCATACCCGTCAGCGTGAACAGCATCCAGCAGAGAACGGCGGTCCATGGCAGCCAGAACAGTCCCACCACATCG
CTGGTGGACACCAGCACCAATGGATCCACGCGATCGCGGCCCTGGCACGACTTTGGACGTCAGAATGATGCCGACAAAAT
ACAAATACCAAAAATCTTCACAAACGTGGGCTTCCGATATCACCTGGAGAGCCCCATCAGTTCATCGCAGAGGCGCGAGG
ACGATCGCATCACCTACATCAACAAGGGTCAATTCTATGGAATAACGCTGGAGTATGTGCACGATGCGGAAAAGCCCATT
AAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGTCCCGAGGATGAGATCAAGGCCTGGCA
ATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTCGTTGGCT
GCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTT
CAGTGCTTGAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACATTTGAGGA
CCCCAGAGATACGGCGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAACGAAAGACGC
GCGATGAAGAGCGGCGGGCCGCCAAACGAAAGATGACAGCCACGGGCAGAAAGAAGCTGGACGAGCTTTACCATCCGGTA
ACGGATCGGTCCGAGTTCTATGGCATGCAGGACTTCGCCAAGCCGCCGGTGCTATTCTCGCCCGCCGAGGACATGGAGAA
GGTAGGTCAGCTGGGCATTGGCGCTGCCACCGGCATGACATTCAACCCCCTGAGCAACGGCAACTCCAACTCCAACTCGC
ACTCGTCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCACCGTTCCTGCTCCACGGC
CAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAACCATTTTCCGCCCGACATGCAGACCGATAAGAAGGATCACATACT
GGACCAGAACATGTTGACCAGCACACCCCTGACCGACTTTGGTCCGCCGATGAAGCGCGGCAGGATGACGCCGCCGACCT
CGGAACGCGTGATGCTGTACGTGCGGCAGGAGAACGAGGAGGTGTATACACCGTTGCACGTGGTGCCGCCCACCACGATC
GGCCTGCTAAATGCGATTGAAAACAAATACAAAATCTCAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGG
GATTACTGCGAAAATTGACGATGACATGATATCGTTCTACTGCAACGAGGACATCTTTCTGCTGGAGGTGCAACAGATCG
AGGACGACCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAGCGCTGGCAGTACGGGTAGCACCCGCTAACCGCA
CTCAAAAAAAAAAGCAAACAAACACACAAATTACGGACACAACAAGTTGTTTCAATAAGCCATTTTCCATAGAGCCTAAG
TCTAAATATCGTAGTTATAATAATGGGATCCGCAACAAATCGAGTTGCAACGAATGTTAAGAACGCTAACACAATACGCA
TGTAAAATGATACTTTAAAATTGATTTAGTTATTTTAGCAACAATGAGATTATCTAAAATTGTTTGATCAAATTTTACAT
TCTCGCTATGTCTATAGATAATTCTAAGCCCGTAAGCCCATAAGCGTAATCGTAATCGTAATCGTACCGTGTATTTATGC
TCATATATAAACAACTATATATATATATATATATATATATATGTGCGGAGTGCAACAGTGTCTGTCCAGTAGGAGATAAG
TCTCGTTTCCGCTCCCCTGCTTATGCTATGACCTTAGGTCCAGGGCAAGTATGAGTTACCGAATCTATCTATTAGGTGCA
TCTAACGAAAGGAATCATTAGCTCTGCACGAACTCTAGCCGTAGCCTATTGTAATCCATTTGTATGTTTGGCTTAAGCGT
TTTACTTGTTGAATATAAAGTGTAAAATTATTTTTGAAAAAAAAAAACCCACACAAAACAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        grh-RH
        FBtr0300538
        3972
        grh-RI
        FBtr0299705
        4768
        grh-RJ
        FBtr0299706
        6199
        grh-RK
        FBtr0299707
        3438
        grh-RL
        FBtr0300539
        6692
        grh-RO
        FBtr0306625
        3094
        grh-RP
        FBtr0345791
        6230
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        grh-PN
        FBpp0289768
        729
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        grh-PH
        FBpp0289765
        1032
        grh-PI
        FBpp0288983
        1063
        grh-PJ
        FBpp0288984
        1333
        grh-PK
        FBpp0288985
        784
        grh-PL
        FBpp0289766
        1302
        grh-PO
        FBpp0297580
        698
        grh-PP
        FBpp0311781
        1063
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Due to an oversight in the implementation of gene annotation merges, the symbols for this transcript and its associated polypeptide were changed to non-unique designations in r5.9. Although there were no conflicts within a given release, the same symbols were used for different isoforms in different releases. Prior to r5.9 the transcript symbol was grh-RG; from r5.9 to r5.12, it was grh-RC; in r5.13 it was changed to grh-RN, a symbol that has not been used previously in the database.

        Transcript postulated to overlap transposable element.

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

        Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        grh-RN
        Secondary FlyBase IDs
          References (0)