FB2026_02 , released June 18, 2026
Transcript: Dmel\Csk-RJ
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General Information
Symbol
Dmel\Csk-RJ
Species
D. melanogaster
Annotation Symbol
CG42317-RJ
FlyBase ID
FBtr0300548
Feature type
Associated gene
Evidence Rank
Length (nt)
3952
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 61 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        GTCAGAAATGGAGAAAATATCCATATAATCCCATTGATAATTGTGTGCGGACGAGGAGGCACAAGCCAGGAAGACTAGCC
        ACGAGAAGAGCCAGAAGCCCAAGCCGAAGCCGGAGGAAAACCATAAGGAGAAGGAAGCGATCTCGAGAAAGGCGTCCGGC
        GAGGGTGATCTGATCACCGTTGAGATCAAGCAGGGATTGCTGAGGAAGCAGACGGCAACCACGACGACCGGCCAGGCTAT
        GAACAGCCACGCGACTGCCACGCAGAACGGACAAACCACGGTCGTCGGACACCATCGCGGATTCTCGCAGCCCTCGGTGA
        CGGTGGCCGCTGCAGCGGCAACGGGCAGCACGGCTGGTGATCCATGGTTCCTGCAGACCACCGGTCACCAGATGCCACCC
        ACTGCACCGTTGCGGCACAACAAGCGTCCTGCCCCCCAGCCGAATGCGGTTTTGGGAGCGGGTTCCTCGGGAACAGCGCC
        TGGATCGGCGGTTGGCGCCGTACTGCTCCACCAACAGCAGCTCAGCCAGTCGCAGCCGCACATTGTGCCGCCCAGCATAC
        CGCCGCACCACCACCACCATCGCGAGAACAATGTGCACCCCATCCAGGCGGGCGCGGCAGCCGCATTGCATTTGTCATCG
        CATGCGCTTAATAGTCATAATTTAATCAGCAGCGCCAGCAATCATTCGCCCAAGTCCCCCAGCCAGACGCAGCAGCAGCA
        ACAGACGACGAACCAGCAGCAACAACAGCAGCAGCAGCAGGCGTCCCACAGCATACTGTCCACGTTTGCGCCCGCCCCCA
        CTGTCGCCGCCGTTCAGCCGGCGGGATCGCAGTCCGTTGCCGGTACCGCTGCCGCAGTGGCCGCCGTTGCCCAGCAGCAG
        CAACAGCAGCATCTTCAGCTGCTGGCCAACTGTCCGCCCGGTGGAGCGGGTCTAATGTCCTCCTCCCTGAATGCAGCCCA
        AATGGGCATGCATGGCGCCGAGCGAGCGCTGCCGCCAAAGAGTCTGGCGCTGAGTGGCAGCCAGCACGGCAGCAATATGC
        TACTGCACACAGCACCGCAACCGCCACAGGCATCCCAGCCAGCGGCAGTCGTCGGCGTCAGTGGTAGCGGATCGGCGGGT
        ATGTCCACCTCGCTGCACAGCTTCGATATTAATGGAGTCACGGCAGGCAGCGGGGTGAATGCGAGCAGCGCGTGGTCAAG
        CGGATCCACCACTGCCATGAACCATGCTTCCCTCTCGCCCACAGCGTTGGCACCGCAACAAGGTCGGTCCAGGTGCGAGG
        TCAAACTGAACGCCATGCCATGGTTCCATGGCAGCATAACGCGGGATGAGGCGGAGCATCTGCTGCAGCCGCGTGAGGAT
        GGTTTGTTCCTGGTTCGCGAGTCCACAAACTTCCCCGGCGACTACACGCTCTGCGTTTGTTTCCAGTCCAAGGTGGAGCA
        CTACCGGGTCAAGTACCTAGAGAACAAGCTGACCATCGACGACGAGGAATACTTTGAGAATTTGGGCCAGCTAGTGGCGC
        ACTACGAGGCGGATGCGGATGGACTGTGCACCCAGCTGATTAAATGCTTGCCAAAGCTGGGCAAACAAGAGTTTTGCATT
        AACTCCAAAGATTTCGTGGACAAGGGCTGGGTGATCCCTGAAGCGGAGCTGCAGCTGCGCGAGAGCATCGGCAAGGGCGA
        GTTCGGTGACGTGATGCTGGGCATATTACGCAACGAGAAGGTGGCCGTCAAGATGCTGAAGGACGAGGGCGCCGTGCAGA
        AGTTTCTGGCTGAGGCCTCGGTCATGACCACGCTGGAGCACGACAATTTGGTAAAGTTTATCGGCCTTGTCTTCACCAGC
        AAGCATCTGTATCTGGTTACGGAATATATGAGTAAGGGATCACTGGTTGATTACCTGCGATCGCGAGGACGACAGCACAT
        AACCAAAAAGGATCAAATCATTTTTGCCTACGACACTGCCTCTGGTATGGAGTATCTGGAAGCCAAAAAGGTTGTCCATC
        GCGATCTGGCAGCTCGCAATGTCCTTATATCAGAGGATTGCGTGGCTAAAGTATCGGATTTCGGTTTGGCACGCGAGGAA
        TGCTACAATCTTGACGTTGGCAAGCTGCCCATAAAATGGACGGCTCCCGAGGCACTTAAAAATGGGCGTTTTTCCAACAA
        ATCAGACATGTGGAGCTTTGGCATACTGCTATGGGAAATCTACTCCTTTGGACGCGTGCCCTATCCCAGAATTCCATTAG
        CCGATGTGGTAAAGCACGTTGAGGTGGGCTACAAAATGGAAGCGCCCGAGGGCTGTCCACCGGAGATTTACGAAATGATG
        CGGCAGGCCTGGGACCTAAATCCCGCCAAGCGACCCACATTCGCGGAGCTCAAGGTCAAACTGCAGCTACTGAACAATGC
        CACGGCGTGAGGAGTCAGCAAGGGAGTGACGCCAGTGACGCGCGATAGGGATGAACTAAAGCGAATTGTTTAGACCAGAT
        GTCATTTAAGCCATGGGCAGAGCCAATCCCTGCCAGAAATGGGCCAGATCCAAAGCTGAAACTGACTTGACACTGAACGC
        AACAATTTTTCGTACGATTATATACATACATGAATATATAACTACTTTACAACAATTTATTTACATATATAATTTATGAA
        GTAAGTTTTGTAAGCCTAAGCGAAGGAACCCAACACAATCAAGCAATGTTAGTGAGTTGCGCCAGCTTCCGACATATAAT
        TAATTGATAACCAATCGAACGGACTACGTGAGAAGGAGAGGAGAAGGGCAGCTGCGTAGCCTACCTACTACTACTACCTT
        TAACTACCTACCACAATATTATGTTATGTGTACACTTAACCATAGCTATTTATTAGTTAACTTCTCGGTTCGGACTCCAC
        TGTAACATTTAACTTCTGGATTCGTGACCACGTCTGTATCTTTATGTTATAGAATACGCATACATATGAGCGCCTTCCGT
        TCGGAGGGCGCCTGTCTAAAGCAATTGTTTATAGGATGTTTCCCTTTGATATCGTAAAAACGACAAGTTTTATTCGAGTT
        CCGTATACTCTTTCTGTTAACCGTTTCTGTTTGTAGCACAAAACTGAGGGATGACCACAAAGAACTTGTCCAACAAGTCG
        TTGGCAAAGAGATCACGCTGAGAATTAGTTAAATTTCGTTACATTTATTTGTATTAAAAGAATAAAAATAAAACGAAAAC
        AAAGCCAGCAAAAATTATGCAACATGGGCAAGCGAAACCTAAGCATAAATAAACGAAGGCGGCTGATAGGCTGCGTGTCC
        TTAAACTCAAGAAAACGAAAAAGAGAAAAACACTTGTGAAAATATGCATTACATTAAAACGTCTACATATACATAATACA
        ATACACATTACCTACGTATTTAGCTTATAAATCGATTAATAATATACAAATATAAATTATTACGCGCAAAGTTCGTGGAT
        TTGTTCATTATTCGGTCCATTCTTCTAACAAGGAATCTCCTTCTCTGTACTTTAATCGAACCCATCCAATGCATCTGGCG
        GCAAGGCAAAGGAAAATTGTAATTTATTTTTTAAAAACCTACCCCCTAATTAACTTAACAAATAATGTCTATTTTAAAGT
        TCCCTTTAAGCAAATTGTACATTTATGCGTTTTAATTTTCGTTTAAGGGCAGCCACTTTGCTTTAACACATAATTTTAGT
        ATACTTTATGTAAAACACACCTAATACACCAACAACACACACCCCCTCACAAACACACATCCACGTCCACATGGTATATA
        TTTAATTAATTTTAAAGTTATTATTTTTTTACAAACACACTTCAATCCACATTGTAAACGAAAGTTCTATGCGTTAGTGA
        AACCCTGGAGAAAGCAACACAAATATGCACCAACACACAAAACTTAAACGCGGTGATTAAAGGAGGGCAGAGAGTTCTAA
        AACTTTTAATAAAAGTAAAGAATACAAGCATG
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0299728
        3946
        FBtr0299729
        5093
        FBtr0300546
        4088
        FBtr0300547
        4524
        FBtr0300549
        4172
        FBtr0335449
        4832
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0289775
        723
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0289006
        723
        FBpp0289007
        1052
        FBpp0289773
        805
        FBpp0289774
        723
        FBpp0289776
        723
        FBpp0307427
        1052
        Comments

        Due to an oversight in the implementation of gene annotation merges, the symbols for this transcript and its associated polypeptide were changed to non-unique designations in r5.9. Although there were no conflicts within a given release, the same symbols were used for different isoforms in different releases. Prior to r5.9 the transcript symbol was Csk-RC; from r5.9 to r5.12, it was Csk-RD; in r5.13 it was changed to Csk-RJ, a symbol that has not been used previously in the database.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Csk-RJ
        Secondary FlyBase IDs
          References (0)