FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Pde6-RC
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General Information
Symbol
Dmel\Pde6-RC
Species
D. melanogaster
Annotation Symbol
CG8279-RC
FlyBase ID
FBtr0330048
Feature type
mRNA
Associated gene
Dmel\Pde6
Evidence Rank
Length (nt)
6101
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 23 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTGCTAAAGTTGTACTCGTGCTGCGTAGCTCGTGCGGGCAAGGCCGTTTCTCGACACGCCCGCCCACCCACCGCCCCGC
GCGCCCTCTGCCACGCCCCCAGCAGCTGGGAGCAGCAGCTGCTTTTCAGTAGTGAAGTGCGTGCGCGTTTCGCGGCAAAC
GGAATTGCCGCCGGTTGTAAAACAGTCACAGGATAAAATCGAAATCAGTTCAGTTCGACTCAACCCGCTTTTTGCATAAT
CCAAAACGTAATTCGAAGGGCGAAACTAAAAATGTATAGCGGCGCGTAAATATACTATTTGCTATTTACTTTGCCGTGCA
ATTTCCAGTCTGAATCGCAGCCCACCCCCCCGTTTATCAACGAAGCGCCAGTCGAGCCGTGTTATCAGCAAACGAAGCGC
GACAAAAAACACAGAAAAACGTACTACAAAAAAAAAAAAAATAATAATAAAAATAAAATAGAAAGAAACAGCACAAAGTA
TATGGGAAACCAAAGTGAAAAGAAAATGCATTTGAGTGCGTGAGAGTGTGTGTGCTTAGCAAGAAGCCTGAAAAACTAGC
ACAAAACATAAACTGGTTTCTTCAATCAAAGGGAAAAATCAACTGTTAACCGACGAGTGGACGCATTTAAAGCTATCGCA
AAAGACAAACAACAAGGCAGACGTGCATGAAAGGAAATCTGGCGGCTAACCGGCCGATGAGTCTGGGCCATCATCAATTA
CCCCATCGCCTCGCACCTGGCCATTAAAGCCAAGGCGTGTGGAGATTGTGCGGATTGTGGAGAGCAACAAGTTGGCCGGA
CAAGTCCTTGGGGACGCCAAGACGAAGCCACCAGTCCCCGCATAAGTGGGCGAGTACGTGACTTAATCAGCGGGCGCAGC
TGGATTCTGAGCCTGGCTAACGAGGCGACCACAACGATCACAAATAGAAGCTGGAGAAGAAGGAGGTGTGCCCCCGTTTT
GCCAGCAATGATTTCATGCACGGCCCAGTGAGCAGGAGCAGCAGCAGCAGCAACATGACAGATGTGTCATCGCCAGCTGG
TGGCGCCGCATCTCCGGTTGAAATGTCCACCACCAGCAGCTCTTCAGCCGCCACTACGTCGGCGTCCTCGTCCAAACCGC
TGACCAATGGCGCCAACAAGACGGCTATATCAACGGCAGCTGGAGGAGTGACACCGGGTGCTGTTCCTGGACCCGGGTCC
GGAGCAATCCCCGCCAGCAGTTCGAGTGGCAATCAGGTCAAACTGGAGCATCATCACCGCCAGAGCAATAACAATCGACC
TGCGGTTACCAATCGCAGTTCGGAAACCAAGCTGATGACACCTACCGGCAGTTCCTCATCCCCATCGCAATCTCCATCCC
AAACCCAAGCCAGTATACAAACCCAAACGAGTCAGCAGGACAGGCTGGCCAAGGCGAGCACCACGGCATCCCAGCAGGAT
GTCGATGAGGTGGCCCGCCTTTTCGAGGAGAAGCCGGAAGCATTCGAGAAGTGGCTGACGGAAAGGGCTCCTCCAGAGGC
ACTCAGCCGACTGCAGGAGTTCATTGAGAATCGCAAGCCGCACAAGCGACCCTCGGTCACCTCCGATCTCTTCCAGCAGT
GGATGGCCGCATCGCCCACCGTGCAGCAGAAATCGCCGAGGAGTCTCTCGAACTCTTCAGCATCGTCACTTCCGGAGTGC
CGGAGGCATCTGATGGACCTGGACGAGGGCGAGCTGTTCATGGAACTGATTCGCGACGTGGCCAACGAGCTGGACATCGA
TGTCCTCTGCCACAAGATTCTGGTCAATGTCGGACTGCTCACCCACGCGGATCGTGGCTCCCTGTTTCTGGCCAAGGGGA
CGCCCACCAACAAATATCTGGTGGCCAAGCTATTCGATGTCACTCAAAAGACAGCACTCAAGGACGCGGTGACTCGGGCC
AGTGCCGAGGAGATAATCATTCCCTTTGGCATTGGAATCGCGGGAATGGTGGCGCAGACAAAGCAGATGATTAACATCAA
GGAGGCCTACAAGGATGCTCGCTTCAATTGCGAAATCGATCTGAAGACCGGCTACAAAACGAACGCCATCCTCTGCATGC
CCATTTGCAATTACGAGGGCGACATCATAGGCGTGGCGCAAATTATTAACAAAACGAATGGCTGCATGGAGTTTGACGAG
CACGATGTGGAAATTTTTCGCCGCTATTTGACCTTTTGTGGAATTGGCATACAGAATGCCCAGCTCTTTGAGATGTCCGT
CCAGGAATACCGGCGTAATCAAATTCTCCTCAATTTGGCGCGCAGTATCTTCGAGGAGCAGAATAATCTTGAGTGCTTAG
TTACCAAAATTATGACAGAGGCCCGGGAACTACTCAAATGCGAAAGGTGCTCTGTGTTTCTAGTGGATCTCGACTGTTGC
GAGGCGAGCCATTTGGAGAAGATAATTGAGAAGCCCAATCAGCCAGCCACCCGCGCCATCAAGTCCGCCGATAGCTTCGA
GGAGAAGAAAATGCGCAATCGTTTCACGGTGCTCTTCGAACTCGGTGGAGAATATCAGGCTGCCAATGTTTCGAGGCCAT
CTGTCAGCGAGTTGAGCTCCTCGACGCTGGCCCAGATTGCTCAGTTTGTGGCCACCACCGGGCAAACGGTGAACATCTGC
GATGTCATCGAATGGGTCAGGGATCACAATCAAATTCGAGCGGAGGACGAAATAGATAGCACCCAGGCCATCCTCTGCAT
GCCCATTATGAATGCACAGAAGAAGGTCATTGGCGTTGCCCAGCTTATCAACAAGGCCAACGGAGTTCCCTTCACCGATT
CGGATGCCTCTATTTTCGAGGCATTTGCCATTTTCTGTGGCTTGGGCATTCACAACACCCAGATGTACGAGAATGCCTGC
AAGTTGATGGCCAAGCAGAAGGTGGCCCTCGAGTGCCTCAGTTACCATGCCACCGCTAGTCAGGATCAGACGGAGAAGCT
CACCCAGGACGTGATTGCCGAGGCGGAGTCCTACAACCTGTACAGCTTCACCTTTACGGACTTTGAGCTGGTCGACGATG
ACACCTGTCGCGCAGTGCTTCGCATGTTTATGCAGTGCAATTTGGTCTCGCAGTTTCAGATACCATATGATGTACTTTGC
CGCTGGGTTTTAAGTGTTCGCAAGAATTATCGTCCTGTTAAATATCACAATTGGAGGCATGCTCTAAACGTGGCCCAAAC
GATGTTCGCCATGCTTAAAACTGGAAAGATGGAGCGCTTTATGACAGATCTGGAGATTCTGGGTCTGTTGGTGGCCTGTT
TGTGCCATGACTTGGATCATCGTGGCACCAACAATGCATTCCAGACCAAAACGGAGTCCCCGCTGGCCATTTTGTACACC
ACTAGCACGATGGAGCACCATCACTTCGATCAGTGCGTAATGATTCTCAATTCGGAGGGAAATAATATATTTCAGGCCTT
GTCACCTGAGGACTATCGTTCAGTCATGAAGACCGTGGAAAGCGCCATTCTGTCCACCGATCTGGCCATGTATTTCAAGA
AAAGGAACGCTTTCCTAGAGTTGGTGGAAAATGGGGAATTCGATTGGCAGGGCGAGGAGAAGAAAGATTTGCTTTGTGGC
ATGATGATGACTGCTTGCGATGTGAGTGCCATTGCCAAGCCCTGGGAGGTTCAGCACAAGGTTGCCAAGTTGGTGGCCGA
TGAGTTCTTTGACCAAGGAGATCTCGAAAAGCTGCAGCTTAACACCCAACCAGTCGCCATGATGGACAGGGAGCGCAAGG
ACGAGCTACCCAAGATGCAGGTGGGCTTTATCGACGTGATCTGTCTACCACTCTACAGAGTGCTTTGCGACACCTTTCCC
TGGATCACTCCGCTCTATGAAGGAACCTTGGAGAACCGACGCAACTGGCAGGATCTGGCCGAGAAAGTGGAAATGGGCCT
CACATGGATCGATCACGATACGATTGACAAACCCGTGGAGGAGTTTGCCGCGTGTGCGGATGAAGAAATCAAGGATATCG
AGTTCACTGTGACCACGCTAAATTGCAATCAGCAATCTCAGCATGGCAGCGAGGATAGCCACACGCCGGAGCACCAGCGA
AGTGGCTCCAGATTGAGCATGAAGAAGACCGGAGCCCTGGGCAAGGCAGTTCGATCGAAGCTATCAAAGACTCTATACAA
CAGCATGGATGGCTCAAAGCCGAAGACCTCCTTGAAGCTCCTTGAGTCCCATGTCAGCGAGGATATGGATGACAAAAGTC
CTACGAGTCCTTCGCAGCCGCAGGCCTCCGGGAGCATGGGCCGCATGTCCGCCTCGTCCTCCACCTCATCTGCCGGCGGC
CAGATGGTGGACAAGTCCAAAAAGCGTTCCAAACTGTGCGCGTTGTTATGACGAAAGCCGTCCAATTAGAATATGGCGAC
TCCCTCCAGCACCACGGGCAGTGAGACTGACCACAAGTGCGGAGGGGGGATGACCGAGTTCTAATTGGATTTTGGAGTTT
TGAAAACTCACATTAAAAATCTTGTTGTGCTCCACCTGCATCTACTACAGGATTTGGTACTCGATTTCGTTTGGTTTGAA
TGTTTTTGTTTGTGAAACTATGTATTTCAATAAAATAACTTTTGCTTTAGATGTCAAGACATTGAAACTAAAGTCCCTGC
TACACCAGGGATAAAATAGTTTATTCTCTTTTATCCTATTTTACAAAATTAAATATAAATGTAAATTTTTATTGTAAACA
AAAGTTATTTATCAAACTTCAGAAACTTGAAAAAGTGCTTTTAATTGAAACATATTATAGAAACAGAAGAATTGGAAACT
CATGTATAATTTCATTAACAAGAAACGCATCAAATCTAATCGTAATCGAGAACGAAGGCAGGAGTATATGTACATGTTTG
ATATATGTTTTAAGTACTATAACTACCCATATACAAGCGAATGAGCATTAGGCAGAAGCAAATGCAGTTGCAATATTAAG
CATAAGTGAATGTCAAAATATGTGATCTATTTACGGTCCCGCAGGTGCGAAGCCCTCGGGTTGAACCTTTGTCGGATACT
ATCCTCTCCCTATCTATCTATCTATCTATCTATCTATCGACCTATCTATCTAACTATCTGTCTGTCGCTTTTAGGTGATT
AAAAACCGCGAAACTAAACTAATTAACTAAGTAGATGGAATCCAACCAACTAGCTAAGAGTGTACGTAGCTACCCTAACC
AAAATCGTGCTAGTCAAACAAACGTATGAGATACTATTATGTGTACGAAACCCCTAGTTAAGAATTTTGAGGCTACATAC
CAGGCATCGGGCATTGGGCATCAGGAAGTCAGATAGGGATCACTACTAGTCCTCGCCTGTGATCGGCTTGAAATCTACTT
TATAGCTAACTAATATACATATATTTGTATGCACAGAGGTGTGTATTTACGTAGCAAACTATAGCAATATTATATGATAT
TTCCCACACGATTGTGAGCACAGCACAAATATTGATTGATCGAACCGCTCGAAAAAAAGATGGAACATAAGGCAGCAATT
GAAGATAAATGGATAATACTTTTCGTACTGTGTTTGATTGTATAAATATAAATATTAGCTTAAAGATACACAGCAGTCAA
TTTTTGAACTCGAACTCAAGCAAAATGCGAATACGATAGATATTTGGCATATAATCGCACTCGGTTAATATGAATAATCC
GGTCCCACACTCTCCTAGTTGTTGCAATCAAGTTTACTTTAAATGTGTGTACGTGTACAAAGCAAACTACTTATATACTA
TAGAGCATAAATATAAACTAATTATACATATACGGAACCTATATAAAATATTTACATTTGACTAATGTATCTATAACTGA
ATTGCTTAGAATTAACGTGTTTAAGGGCATTTTGATTAATTTTTTATTGGTCTGCGTGTGCTAATCAAAATTGACTATAA
AATGTCAACAAAAATCAAGTTTTACAACTATTTTTCTAGTTACTCTGCCGCTCGCCTGAAAATCAAAATCCAGACAACTT
TACGAGCCGATCTAAACCCATTTCTGGATTTAGTTGTGACAATTGTATTAATTGTGTATATTTCTTGGTCATTTCGTTGC
TTGTTTTTGTTCCTTAGATTG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Pde6-RB
        FBtr0300330
        6355
        Pde6-RD
        FBtr0345168
        5742
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Pde6-PC
        FBpp0303081
        1124
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Pde6-PB
        FBpp0289559
        1118
        Pde6-PD
        FBpp0311378
        1118
        Comments

        Extended 5' UTR based on RNA-Seq and/or EST data.

        Transcript terminates at site supported by polyadenylated cDNA.

        Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

        Stop-codon suppression (UGA) postulated (FBrf0216884); reflected in aa sequence of predicted polypeptide.

        translation_exception: stop_codon_readthrough

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Pde6-RC
        Secondary FlyBase IDs
          References (0)