FB2026_02 , released June 18, 2026
Transcript: Dmel\jim-RF
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General Information
Symbol
Dmel\jim-RF
Species
D. melanogaster
Annotation Symbol
CG11352-RF
FlyBase ID
FBtr0330076
Feature type
mRNA
Associated gene
Dmel\jim
Evidence Rank
Length (nt)
6714
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 41 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CATATTCATCTTTTTGGCCGTTTTCGGTGCTTTTTGACTGTTTGGAACATTTTTAAACATTACGTTAAAACGTTGTTGAT
ACTTACCGAAATATTGTTTTGTTTAACAAATAATAATATAACCACTATAATAATGTCAGTATAATACAAAACGAACGGAA
CGAAGATCAGAGCATATTATAATACAAATGTTATAAAATAAAAAGCGACAACGATAAAAAATTATTTGCCATCAGTTAAC
TTTTTATTTCAAACATTCTTATTAAAAAATAACTAAATGATTTGAATATAATTTACGCCATCAATTTTACGACATAAATT
ATAGCAACAACAACAAAAGAAAATAGTACAACAAAATAAAGTTATCTTTCAGTTGTATGAAAAAACAAAAAGTGATTTTT
AGTTAGTTTCTCAAAATTTAACAAACAAAATTCACAACAAAATTTGGAATACAACAACTACAAACACCGCAACAACAACA
ACAACAACAACAATAACAGCAACAATTACAACCACTGCAACAACCAACCAACCGAGAACAACTTCAAAATCAAGAAAATA
AAAAGAAAAAATAATACGAGCAAAGTTAATAATAACGAAAACTGTAACCATAATAAAGAGCCTAATTGAACGAAATAAAC
CGAAAAATAATCAAAGCCCAACAAATAACGAATAACACAACCAAAAGGAAACAACCAGGCAAACAAATCAAAGCAAACAA
ACGAAAATAGACACACGAAATAGCCAAAAAAAAACCCAACAAAACCTAACAAGAAATAGCAACAGCAGGAGAACAAGCAG
CCGAAACAAACGAAAATAGCAATCGAAGCCACTCAAAACCAATCGAAACAGAATCAGAATCACAACCAGAAATAGCCTTA
AACCCGCCTCCAAGCCAACACAACAGCAGAATTCAAAAGATATAACCGATAACTAAATCCGATAACAGAATAACAAATAG
AAAATAGAGCAACGAAACAGAAACAGGAAAAGAAAATGCAACAGCAAAAGTGACAACTGAAATTCAAAACCAAAAGCCAA
CAAAAAAAATAATACAAAAACGGAAATAGCCAAAATTTGTTAAATTTATTTTGTGTGTTTTTTAACGGGAAAAAGCAAAA
CAGCAACTAAAACATAACGGTAATAAAAAAAAGCCAAAAACATTTGTCGTTAAACAAATTGAACTCTTGCGTTACCTTAT
TTACATATTCGCCTTAGTCCTTAAACTTTGCGTTCGTCAAAAAAGCGGTCGAGAAAATGTTCTGAAAAAGTCTTGAATAA
ATCGAGCTGAATAACAAACACTTTATAAACTTTGAGAGGTGAAGCAAACGAAATAAAGAAGAAAGCGGCGAAACCCATTT
CGCGAGTGGAGGAGAGCAGCAAACTGTAGAAACAGTTTTGTGCCAAAGTTGCGCAATCACAAGTGTAAATTTGTGTATGT
GTGTGTGTGGAACGCGTCAGTGCTAGGAGCTCACGTTGTACCCAGGAGAAGATACATAAATCGGATCGAAGAACATCTCT
ATACAATATCAATATATATCCATATACAAATTATCTAAAATTGTTCATATCGTGGCAAAAGCCAAGTATGATATAAAGGC
ATGTAAAATCCGTTTTCGAAAGCATTTCGTACTTACAAGAAATTAATATAACACTAGTAGTGAGAAAATGATAAACAAAA
ACCAAATAAAATTCCATTCAGATAGGAGGAACGATCTAGGCTAAACATCAAATTATATAACTATAACAATAAAACACAAG
TTTTTGACGATCTTAACAGTATAGAGGAAGAGTAATTCCGGTAAAAGCCAACAATCCCCACACACCCATCCCATAGGCAT
CGTAGCAAAAGAAACCTTTCGAAGGGAATCAGTTTTGCCTGTCAATTTGTTGAACCAAAGGAAAATCGCATCAATTAAAG
CATCTTTAAAACCAATTGTAAGCCAACAAAGGAGAGGGTGACATTTTATTTAAAAGAAAAAAGCAAACGTAACGGTTTTC
GGTGAGCGAAAGAGCCAACTACACGAAGAAGTTTATAAACGTAAATAAATAAATGAAACAAATAAGAAGAAAGGAATTTA
AAATTTAATCAACATGAAAAGAAACAAATAACCAGCAGAGACCACAGTGGCGATAAGCCCAGCACAGCTAAGAGAGCCAA
GAAGCCCATTTATAATGTGCATCAAAAGTCAATAAAAGGACACTTTGAAATTGCTTAAAACGTCATAAGAGTCAAAGGCC
ATAACAAATAAAAGCCCGAGAGAGCAGAAGGAGCCCTTCCTTGAACACTTACCAATTGAACAGGGAACCAGCAGCAATGG
CCATCAACTTTTCGGCTTCCTTTGCGGCTTGCATAGCAGCCGGGCTAAAGGTGCCGCGCCAGATAATGTACTGCATCACT
CAGGACACGGGCCAGCCATACGTGCTCTATAAGGACTCGCAGGACGCTGAACGGAACCCCGGTGCCATAGGTGCCACTCC
CGCCCAGTGGGGCAGCGAGATGTACCCCAACATCCAGCAACAGGCCCAGCAGCACCTAACTGCCCAGCAGCAGCAACAGC
AGCAGCAGCAGAACGCGGCGCAAGCAGCGGCCCAGGCGGCAGCTGTGGCAGCGGCAGCGGGACAGCCGCAAAGTCCGCCG
GGGGGCGGACAGGAGGCCCGCGACAACGGCAGCGGTGATGGCCGCCAGCAGCAGGTGTCGCCCTCCTCGAGTCCGTACCC
TTCGGTCCAGCAGCAGCAGAGGGCAAACGGGGCAGGCGACGAGGACCCCATGAACCACCAGCTCGCCAACCAGCAGAACC
CCGCTCCCAATCAAAACCAAAGCAGCAATGACCCCCAGCATTCGGGCTCCAACGCGGGCGAATCAGGCAACCCGCATGTC
CAGCAGAACGGCGGACCGCAAAATGACCCCGGCAACAGTTTTCGAACACCGGACTATTATGACCCCCGCCACGCGGCACC
GCAAGGGGGGATGCTGGCACCGCCTGGCTTCCCACCGCTTCACTATCTTAACAAGGGCGTTTTGCCAATGGAACAGTCTG
GCGGTGGCGGCGGGGCCGGGGGTGGAGAAGCCTACGCGCTTCCCGAAATGCTGCCGGCTCAGCAAAACGGTCAGCAGAAC
GCCGGTCCAGCGAACACCAATGCCAACGAAGGCGGTGCGGGAGCCAACGGGAGCGGAGGTGTAGGCGGTGCGACGGGAGC
GAGCGTGGGAGTGGGATCGGTGGGCGTGACGAGCGGCGGAAGGACGGGCAACGGACCAGGACGCCCGCACAAGAACAAGC
CACACAGCGACCTGCGGCTCTTCAAGTGCCTCACCTGCGGCAAGGACTTCAAGCAGAAGAGCACGTTGCTGCAGCACGAC
CGCATCCACACGGACGCACGACCCTTCCCGTGCTCCGAGTGCGGCAAACGCTTTCGCCAGCAGTCGCACCTTACACAGCA
TTTGCGCATCCACGCCAACGAAAAGCCCTTCACCTGCCCATACTGCTCGCGCAGTTTTCGGCAGCGCGCCATTCTCAACC
AGCACATACGCATCCATTCGGGTGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCAAGCACTTTCGCCAGAAAGCCATCCTC
AATCAGCATGTGCGCACCCACCAAGACGTCTCGCCACACCTTATTTTCAAAAACGGGCCGCACCCGACCCTGTGGCCCTC
GGATGTACCCTTCCCTGGCGAGGACAACGACACTAAGGGCGATATCGCCGGCACGGGCGGCGGCTACCACGACGAGGACT
CCCAGGGAACGCCGGATGGCAGCGGTGGCATGCACTACCCCTCTTACTTCAAGGACGGCAAGGGCCAAAAGATACTGCCC
GAGGTGCTGCAGCATATCGGCGTGAGACCGGCAAACATGCCGCTCTACGTGCGGTGCCCCATCTGCGACAAGGAGTTTAA
GCAGAAGACGACGCTGTTGCAACACGGCTGCATCCACATCGAGTCGCGGCCGTACCCCTGCCCGGAGTGCGGAAAACGTT
TCCGGCAGCAGTCGCATCTTACGCAGCACCTGCGCATTCACACTAACGAGAAGCCCTTTGGCTGCATGTACTGTCCGCGA
TTCTTCCGCCAGCGGACCATCCTCAATCAGCACTTGCGTATCCACACCGGCGAGAAGCCGTACAAGTGTGGTCAGTGCGG
CAAGGACTTCCGTCAGAAGGCCATCCTGGACCAGCACACGCGCACCCACCAGGGCGATCGTCCATTCTGTTGTCCTATGC
CCAACTGTCGTCGGCGCTTTGCTACGGAGAATGAGGTTACCAAGCACATCGACAACCACATGAACCCCAACACCACTAAG
GTGCGCCGACAGCAACAGCAGCAGCACCAACAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGAA
TAACAACGCTGTCGCCCAGGTGGCCAATCACCTGATGAACGACGCCAAGAGCCTGGCGGCCCAACAGTTCCTCAACAACA
ACAATCCCTCGGCAGTGGACAACAAGGCCAACATCCTTCCGGTGCGCAGTATAGCATCCAACGCTGCGGCAGCCGCTGTT
GTCCAGCAGTCCGTAGTAAAGAACGAGCTCTATTTTCCGCAGTGCTACGGACCACCCTTCCAGCATCCCTTTCAGGCACA
GCAGCAGCAGGCCCAACAGCCCAGCGTGGCCCACGCAAACGGAGGACCCACTCCACCCGTAACCGTAACGGTGGCCAACT
CTGTGGCATCCGGCGTGGTGGTTCAGCAGAATGCTTCTGCCTCTGTGGTAGCCCAGTGACATCCCACCACTGCAGCAACT
GGGGCACAACAACAGCAGCCATCGGCGCCGCAGCAGCAGCACCATCCGCCGCCACCTCCGCCCACGTCGACCGCGCATCA
CATTGCATCAGCGGCCGCCGCTGTCACCGCGGTCACGCCCTCATCCGCCCACGCCTCACCAGTTGCGGCGCCACAGACTG
TGACGCTCTCGATCACGCTGCCGCCGCCACCGGCCTCCCATACGGTCCATCCGGGTCACCCGGGTCATCCGGGTCATCCG
GGCGTGGCTAACGGGGCAGCGCCTCCGCCACCAACTCTATCACACGCGATTCCCATTCATCCACACATACACTCGATATT
CGGATCTCTATGATGTCATCAGTAGGAGAGACAGGAGCCGGAGGCAGGAATTCAAAGTTAATAAACACAAACTATTCACC
ATACTTCATAGGTTCGATTAGTTCTTTAGTATTAGACGCAAAACAAATTCTCCTAGTTTTTAAAACTAATCTTAAAATCA
CAAAACACAGTTTGGTAATGGCAAACGAACGAACCGAGAGGAGCTGAACAGAACGCAAACAGGACGAGTACTAGTCTTTT
TGAAAAGGACTCTAAACTTCTTTAATATAAACCATGAACATAAAATGCAAATGGTCAATGTGTAAGAGAAGTAATGAGCA
GAATGAAGGAGAGAAACGAGAGCCAAAACACAACGTTATACGATTTCTATTTGTTTTAGCACCCCAACAACTTTTAAGAC
TAAAAATACATCAAATATTTATACACACAAAAACACACGGACACTTTAGTACAGGCAAATTTCGTAACCCTTAATTTTGG
ATACAATTAATCGAGGATATACCACTTAGGCGTAATACTAGGATAGCTCCGATACAATGAGTATGAACATGTGACGTGAT
AGATAGGGCAGCTATTTGTGGCGAAGGCAGAAGGGGCAGAGCAAAAGGTTGATGGCAAAGAATAGGATGGGGAACGCAGA
CGTTGGCGCTGAGTAATTTGATTTTTGAAGCAGCATCAAAATTTGAGTTATATATACTTCAGATATGTTGATGTATTGGA
GTTTTTGTTTAATGCGCATGGTTGATCGATTTACGCTTGGCTCAGCCAAGGGGATTAGCCAATGGGCCACCAAACTCTTA
TTAGAAATTTCTTTTTCATTTCAATTGATATGTGATTTTTAAAGTGTATAAATGAATACTGGAATGCAATTTAATGATAC
GATAAATCAAGTATAAGTTATGAAACCTTAAGTACATTGACTTAGGATTCATTTGTTGTCTTCCCCAACTAATTATGTGT
AATTTATGTTGAGTTTTTATTTAGTTATTAGGCACGCATACGTTTAACCCAAATATGTCCACACTTTTGCACACACAAGG
CAGACAAAAGAAATCAGCTGGAACATCTTGTTTATCAAGCAGGCAAATTCGAATGTGACTCTTCAGGTGCCATACACAAA
CATAAACAATAGTCAAAAGATTATGGATAATCGCGTATCAATCCTCCAACTTATACTCAGTATAATCTACCGTAATGATG
ACCACCCGATCCCCACCATCTAAGTTCTTCCCCTGCCAACTGTGTGGATATAATCGACAAATTTAGTTTCTTAACAAATT
TTCCAATGTACCGTCAAAGCATTTATAACTGTTATTGATATTTTAGAATATGTTTCCTAAAAAGTATACATATTTTATGT
ATATGTAGAAAACACCGTGGAAGATAAGAAATTATATTCAGTTAGTCGTTTCACTTTATCAAGTATCTACTCATTATTTC
ATAAATTTAATAATTAGTCAATTAAGTTTCTAATGCAATCAAAGTAAGTGCTCCGAATACGGTTTGTTTTCACTGTTTTA
AATTTAAAGTTTATGAATTATGTTTGGATATTTTATTTAAATTTTTTCAATAAAACAATTATATGATTTATCAG
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      jim-RC
      FBtr0078582
      13458
      jim-RD
      FBtr0100184
      4749
      jim-RE
      FBtr0304985
      12379
      jim-RG
      FBtr0333211
      5542
      jim-RH
      FBtr0333212
      5620
      jim-RI
      FBtr0333213
      6193
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      jim-PF
      FBpp0303109
      938
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      jim-PC
      FBpp0078231
      820
      jim-PD
      FBpp0099541
      820
      jim-PE
      FBpp0293522
      825
      jim-PG
      FBpp0305413
      794
      jim-PH
      FBpp0305414
      820
      jim-PI
      FBpp0305415
      792
      Comments

      Transcriptional initiation site is supported by short-capped RNA data (FBrf0209722).

      Transcript terminates at site supported by polyadenylated cDNA.

      Stop-codon suppression (UGA) postulated; reflected in aa sequence of predicted polypeptide.

      translation_exception: stop_codon_readthrough

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      jim-RF
      Secondary FlyBase IDs
        References (0)