FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\scny-RJ
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General Information
Symbol
Dmel\scny-RJ
Species
D. melanogaster
Annotation Symbol
CG5505-RJ
FlyBase ID
FBtr0330128
Feature type
mRNA
Associated gene
Dmel\scny
Evidence Rank
Length (nt)
4538
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 66 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CTGTGAAAATATTTTCAGATAAAATCTGGTGATATCACATTCTGTAACGATGTTCAAAGAATTGTATTTCAAAATCTAGT
ACTGGAAATTTTTTTCGGCGTATACTTTGTGTTCAAGTTTCTTTGTTCAATAGAATAGCTATCTTAATGCTGCACAGTCC
GGTGCCTAGGTACAACAAATGTGTACCCTTTCCAACACTGCGAACAGGTGATGGAAGCGCGATTGTGTGTCAGCAGTTTC
CACAGCGAGCACTGCTCGTTTTATTTATATTTCATAGCAGCGCGGATCAAGTGACTTAATCTGCAGAAGGGAATTCTTCC
AATAAATGCATTATGACTGTGATAATGGTGGACGGGTTCGCCCTGTGGCTGCTCTACAAGCTGTTCCTGTCTCCCTGCTG
CCTTCTCCTGTGGCACGTGCTTAAACTGTCTACCGTCCTCTTTACCTTTGCAGACAATAACGGCGCCCGCAAGCAAGCGG
AGCACCCGAACAATCAGTCGCACCACATCAACCACCACAATCATCAGCATCCGACAAGCAATCCCAATGAGCTGCCCAAG
CCGAAGAGGGTCCTCTATCCGCGGGAGAACATACGCATTGGCTGGAAGCAGTCGGAGCGCAAATGGCAGGTGGGCACGGG
CATGATCAATGTGGGCAACACCTGCTACCTCAACTCAACGCTTCAGGCGCTCCTGCACATACCCGCCCTGGCCAATTGGC
TCGTTTCGGAGCAGGCGCATCTGGCTGACTGCAATGTGGCCGAACCTGGCAGCGGTTGCATCATTTGCGCCATGACCAAA
ACACTTTTGGCCACCCAAAGCAATCAGTCGGCCGTCAGACCCTTCCTCATCTACTCGAAGCTAAAGCAGATCTGCAAACA
CATGGTCGTTGGTCGCCAAGAGGATGCGCACGAGTTCCTGCGCTTCCTGGTCGAGGCCATGGAGCGGGCGTATTTGATGC
GGTTTCGTAACTACAAAGAGCTGGATCAGTTGGTTAAGGAGACCACGCCGCTGGGACAGATCTTTGGCGGCTATCTGCGC
AGCGAGGTGCGCTGTCTGAGCTGCAACCATGTGTCCATTACGTTTCAGCACTTCCAGGATCTGTTGCTCGACATCCGCAA
GGCAGACTCCTTGGAGGATGCTTTCGAGGGACACTTTTCTCGCGAACGGCTAGAGGATATGGGCTACAAGTGCGAGGGAT
GCAAGAAGAAGGTATCTGCCACAAAGCAATTCTCTTTGGAGCGTGCCCCAATCACGCTTTGTATACAGCTGAAGCGATTC
TCCATGATCGGCAACAAACTGACCAAGCAGATTTCCTTCAAGTCACGCATAGATTTGAGCAAATACGCAGCCCGTTCACA
AGCAGCTCAGGCTCAACCGCTCACCTATCGCCTGGTGTCGATGGTCACTCACTTGGGGGCGTCCCAGCACTGCGGTCACT
ACACGGCCATTGGCTCCACGGATACGGGCAGCTTTTACAACTTCGACGACAGCTACGTGCGGCCAATCGCAATGCACAGT
GTGTGCAACACAAATGCCTATATAATGTTTTTCGAACTGGACCTCTCACAGGCTGCCAGTCCGGCGGCCAACAGGCCCAA
TGGAGTGCGTTTGACCAACGGACACAGCACAACGCCAGTGCCGGCGGCGACTGTGTCTTCGCCTTCACCAACGCGTTTCA
TTGGTCCTCAACTGCCGGCGGGTGGAGCAAACGGTTACACTAATGGAAATGCCCAGAAAACCGCCATCCAGTTCAAGCAA
CAAAACCAGCAAAGTCCACAGAACGGACTCCAGCTGGGTACCGGAAAGTTTCAGGACACTGCGAAGCCTCCACTGGTTGG
CGCTCACGCTAAAGGCGAAGCTACTTCAGCTCCCACTGCAAATGGTAACAAAAGTTCCTCCCCAAGCAGCAACAGCAGCA
GCAACCATAAATCAATAAACCAGCAACAATATCTGCCAATTTCCTCGGATGATGAAGACATCGAGGATGAGATGAAGCCC
AGACCAACGACAGCCCAGCTACCGAGCATGCCCAATATGACGGAGAATCATACGGAGCCTAAGGCAAAGTCTCCTGTAAA
GATTCAAGTAAAGACTCCCGTCAAAACGCCACTGAAAAGTCTTGTGCCCTACGAATCAGCATCTGAGGAGGAGGAGGCGC
CTCTACCGAATCCCCGCAAGCGTCCAAGTGGGGAGGATTCTAGCGAGTCGGACCAAGAGTCTGGCCAGACCAATGGTCAC
AGTAAGACCAATGGCAGCCACACCAACGGCTCAGCCTCGTCATCGGTTCACGTTAACAACAGCAAACAAAAGACTGATGC
CATAGACGAGATATTCAAGAGCCTAAAAAAGTCCGCAGACAGTGATGAGGACGACGATGAGGAGGAGCCCAGCATTCAGC
TAACGAATGGCTGGCACCCACAGAAGCAATCACAGTCTCAAAGCAAAGCACCACCATCGCCAAAGACGCCACCCTCGCCA
GCGGTCATCAAATCGAAAACGGGTATCTGGAAAGTTACGCGTAACGATGAGGTCGATGCCATCGAAGATGATGTTGACGT
CGTGGTGGTGGAGGGATCGCCGGTGAAAATTCCGACGCCGAACAAGAACCATCGCAATCCCTTCTCGAGTAGCAAGCCCT
CCACGGACTCGCCCGCAACGCCAGGCGCCAAGCGCCAAAAGTTGCTCAACGGCAGTGCGCTCAAGTCGCACCAGCAGCCA
AGGGTGGGCAATGGCTACCAGAGCAATGCCACCTCGAATGGGAGCACCATCAATGAGCTGCTGAAGCAATCGTATCGTGG
ATACGGCTCCCCCGTGCTCAGTTGGAATGGCAAGCCCGCGGAGCTCGAAAAGGAGACTTTTGAGTTGGTTTGTGCGAAAC
GGATAGCTGGTCACGGCAGTGTGGAAGGCAGCGATATCGTCGAGGGCTCGGTTGCAGTCGACGCGGCAGTGACTAGTGGC
AGTGACAGTAAAGATGTGGTCGTAATTGCAGTGGCGGTAACAGACACGACCGCTGACGCACCCGATCCGGATCGTCTCAC
GGACGGCCGGTAGGAGGTAGAAGCGTCGGCGGCAGAGGCGACGCTTCTTCTTTTTCCCCACTAAGCACATACCACACAAA
ACAAATACAAATAATACGATTACCCCGAATAGTCTGTGATGGCTGCGTTGCTGGTATCCGTTCCCAACCGGGCGGTCACC
ACAACGCGTCCTCCGTTCAGCGAGCGTGAAAAGTGTAGAGAGAGTTGCAAAAGTCATTGCGGGAGAGAGTGACTGCACCG
GAGCCTAGGTAATTCACCCGATGACTCCGCATCCGTTTTCCCGTGCAATGAAGCTTATGATTTGACTGCTGGCCGGCACG
TTGTTTCTTTCATTTCAACCGCCTGATACGCCATAAATTCAACCGTTGTGCCGTTACCGTTTTGCCTGATAACCTGTTAC
AGTGAACCGTGAACCCTACTGGTGGATGCGCGTGAGCAGCGGCAGCGGGACATCGACGACGACGAAGAGAACGAGATGGA
TCGTGGACGTCAGCGGAAGGTGAAGTCCGGTTCGGCTAAGGGAAACAATGCCAGCAACAGCACGCCCGGGTACAATCCAT
TCCAGGAGTACGAGGGCCAGAAGCGCTGGAACAAGAACGGCGGAGGTGGAGGATTTCCGCGATTCTACAATCAGAACTAT
CGCCAGAACTTCCAGCAGCGCAACAAGTTCAAGTTCAACCGCTTCGGAGGACCAGGCAGCGCCAAGTTCCAGCAGCAGCG
AGCCCTGCAACGACATCTGTCCGCCGGCGGTGGCTTCAGTCGGCGACAACCGTCGGCGCAGCAGCAGCAGCAAACCTAAC
TGGATGCGGATAGGCGAGGGTCAGGAGAAAGAGATGACGCCGATGCGACTGCGGCGTGTGCATTTGTTATTGGATTTCAA
TTTCGCATGAGTTTTGTAAACGTTTTTTAACTGCTGATGATGAACATATTAGAAATAGGAGTAGGCGTAGGACTGTAAGC
TATAAGCTAGAACATAATTGTTGCCTCCCAAAATCATCCCCAACCTTCACCGAAGCACACAGTCCCATTAGAAACTAAGG
CTATCATTAAGTACGATAAAAAAAAAGAAATGAAAGATTGTGTTTGGCTGAATTCGTTTTTATTTCATTGAATCGGTATC
CTTGCATCAATCGCGTGCTGGCGATACCGCTTTAATGACGCCAATAATCAGACAACAAGGTTACCGCTCTAATGTTTCAT
TTTTAAAAAATGTTAACCCCGTAAAGGCAAACACTAAACAGGCTGCACAACTGCGCAGAATGGAAATAAAGCAACCCAAT
AATACGTTAAGAACCTATGCCTAACCAGCATGCAAGCAAACTTTGTACATAGATTTCGAGACTAGATTTAGGACCCATGA
AAATTTTATTATAATTTTAGCGGCGCCCCCCTTTTATTTATAGAGCATAACCGAACGGCGGCGAGCAGCGATATTGCCAA
TGTTAATAACCCAAAAAAAATAAAGTATGTTGGATGTAATATGTACCATGATGAATAC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          scny-RB
          FBtr0077101
          3512
          scny-RC
          FBtr0077103
          3637
          scny-RD
          FBtr0077100
          4417
          scny-RG
          FBtr0307975
          4470
          scny-RH
          FBtr0307976
          4303
          scny-RI
          FBtr0330127
          3644
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          scny-PJ
          FBpp0303161
          906
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          scny-PB
          FBpp0076807
          968
          scny-PC
          FBpp0076809
          948
          scny-PD
          FBpp0076806
          1038
          scny-PG
          FBpp0300344
          976
          scny-PH
          FBpp0300345
          976
          scny-PI
          FBpp0303160
          886
          Comments

          Extended 3' UTR based on RNA-Seq and/or EST data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          scny-RJ
          Secondary FlyBase IDs
            References (0)