FB2026_02 , released June 18, 2026
Transcript: Dmel\CG42238-RC
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General Information
Symbol
Dmel\CG42238-RC
Species
D. melanogaster
Annotation Symbol
CG42238-RC
FlyBase ID
FBtr0331199
Feature type
mRNA
Associated gene
Dmel\CG42238
Evidence Rank
Length (nt)
3589
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 41 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CCGAGCCATGGTCTTACTATCCTGTGACCAACCCCGCGGAGAAAAAACATTTTTACCATTATGTTGTTGTCCTCTTCTTT
CATTTTATGAAATGGCTGTGTGAACAAGAGATGGATGGCGCAGTAGTGTGACCAAAATCGTGGGTAAAAAGACGCAGCAA
AATACTGAAACACTCATGAAACGGCCAGTCGGCGAAAAATTTTCAAATCGCGGGGTCGTACAGCGGACGATTTTCAATCG
GAACGGTTCAGCTTTGGAGCGGAGCGCGGAGTTTCGCATTTTTTGTGTTTGTAGCGGAAAATCGGATGAAAAACTCCAAA
TGTTTACCAAATGAGCGGCGACAAATACGCGACCAATTGACGAGATCGTGTGTGTTTTTCTCAATTAAACGAAAAGAAAG
CAGAAAAACTAAGGAAAGGAAAACAGAAACTGAAATTGAATAAGAAAATTGTCCATTTTGGTTTTCCGTGGCAGAGAAAA
GTGAAAAGTTTAATTTACTAAACAAAGCGGCTAAACTGTGTGCGTGTGTGTAGGCGGTTGAGTCTACATGTGTTTGTGTG
TGTGTGGCTGTGTCTCTCTAGTTTTTGCAATTCCCACTGCACACGCTGTTTCGTGTTGGATTATTGGATTATACCGCCAA
TAACGGCACACGCACAGCAACAAAAACAACAAAAAAGCGATAGGGGAGAGCAGACGACGCTGGGATTAATCATTAATGTC
CTGAGATATAAAGAACAGGACTTCCGAAGAACAAGAACAAGGAGCAGTGTGGAAGAGGACGCAGCAGACTTAGAGACGAA
AGCGAGAAAAGTTTTATATGCGGAAGCCAATATCGCCATAGGACCGAAATTCTCAAATACAAGTCCGTTTCACTTCTCCA
GCTGGAAACGAAACCCTTCGTCCTGTCATGCGTCCCTTTCTGCTAATTGCTTTGTGTGACGAGCTCCTGGCGCCTCCTTG
CCTCCACTAAGCAGCCCAGATCCTTCCACACTCAAAGCTCAAGATACTTACCCGGCGACGAAGATACACACATACCTGAA
GAACCGCAGCTGTGCAGCCTGCATTATTTTCCTGGAGGAATGGAAGTTGGATTGGAAGGAGGAAAACCCAACGCCAACGC
GTCTCGTCGACTGTCATGTGCGAGTTTTGTGGCCCCTAACTAAGGCGCCTTGCATAAATTTACGCCAGAGGATAAGCCAA
AAAACAAAAAAAAAAAGAAAGCAGGAGAAGGGCGGTGGAGAGGATAAGAAGAATACTGGCAAGGCAAACATAAAGCAATT
TTATGCGTTTTTAAAATGCGGCAATTGACTGAAACAACAAAAGCGAACCGAGAGACGAGTGGAAAATTCAGGCAAGCCGC
ATAGCATCGTCCATAATTAGCGCCATCGTAGCCAGGGAGCCAAGAAGCAACCAATGGAACATGTTGATGCCGGTGCGGGA
GTACAACAAGCACATAGCCAAAATACCAAATTGCAAGATGAGGCAGCGGCCAACGCTTAGAGCCACCTTCGCATCCCTGC
TGCTGCTCCTTCTCATTGCCCAGACGCTCGATCTGGCGGCTGCCAGTGGATCAGCCGGAAGTGGTGCCGCAGCGGCCGGA
GCTGCAGGTCCTGCCGCGTCCGGTGGCGCGGGTGGCGGGAGTCTGAGCAGTGGAGCCCCCACTCTCATTGCCAATCTCAC
GGAACAAGGCAGTCCCGGTGTGTATAATTCGACAATGGGTTAATGCTAATTACTAGTATATATATACATGGCATTTACGT
GGCAGTTTGCTGACCTTTTTACCTTTTGGCCCTCAACGTAAACGACGTCGTCATTTCGGTATTTGCTAAATGTTTATGCG
GAATCGTTTCTATGAAAACCGCCTACAATAACATTCATTCAAATCGAACAAACAAATTAAATTACATTGTTCGCGTCACT
TAGAATATGATTTTAAATAAATATTATTCTTTTCTAAGACCATCGAGTTGTCGCTTTTCGCAAAGTGTAGAATTCATGAT
ATTCTTAGCATAAACTTAGAATATACGTCCGTGCCGATTTTTGTGTGTATTTCCTTGTGCGCATTTCCGGTTTCTGCTTC
CGGTTGCCACGCGGCGGGGGTGGCAAAAACTATTAGCCACTTGGCGCTAAACAACGCCACCCACGCCCACTCTTCCCCGC
TACTGAAGCAAAACACTAAGCATCAATTAACCCAATTTTCAGAATCCATTTTCACCTGCAGTTACGGTTTCAGCTCACAG
CTCCGGACCTTTGGCCTTTTCTAAGTATTTTCTAGCTGCGTGTTTCACAGCTCCATGCTTACATATACAAATATATGCAT
TGCTATGTTTTTTTTTTTTTTTTTTTTTTTTTGGAAAAGAGTTGTTCCCTTGCGCTTTTTTCTTCTAGCAAATACCCAAG
TGGCGGTGTTGAAACCAACGTCCAACGTCCAGGTCCCAATTCCCCAGACCCACCTAATCCTATAGGTTTAATGCCGGGCA
CTGTTGTCCAGACTTTTTCGTGTTCCCTGCCGTTTCTTCTTTCTTTCACAGGCGTTGGCGCTATTGTTGTAGTTTGGTTT
GGATTGGTCACTGGATCGGGATATGGATTGGAAATGGAAATGGAGTGGAAGCTGAAATCATAATTAATCCATTGATTTCC
AATTTTTTTTCAGCTTAAATAATTCACACAAATCATTTCAGCAATAAATATGAATTCTTTCGCAGCATTTAACAATGAAT
ATTTCAGCAAACAAATGTTTTTTTCAGCCAAGGTTACCTTATTTGTTTTAAATAACATGGGATCCAATTACAAATTGATG
TGCAGGTAATGAACGTAGAAAGAAAAAATTGAATCATTTTAATTTGGAAACGCCACTGTTGCAAACTTTGATTTGCATGT
AAAGTCATAAATAATTCATTTTAACACATCCAACATTTATGAATAATTTTTTCTGTGCTCTTTATATTCTAGCTGTCGCT
ATTAATCAAATTATACGTTTACTACATGCATTTTTAAATTGTTTATTTATGTCGCTACGTTTATGCAGCCGCCTGGAAAT
TTTGTGTGACAGAGTGTCATAAACTGGAGAATGCGGGTGGCCATCTTACCTGGCGCTTGATTGATTCCACCAGCCAAAAA
ATAAACACCTGGAACGACGCCAGATGTCGAGGATAATAAATTTGCCAGGATTCGACTACACTTGGGATACATTTTGAAAT
TCTGGAAGTCAGTAGCCCGACTCAAAGTATACGAAATGGAAATGTATATATTGTTTATAAAAACGTCAAATCGCCTATAG
ACTGTAGCACTATAGCTAAAAGGTATATTTCTTAAAAGAAATTATGCTTAAAAGCTAGTAATGTAAATTAGGGCTGCCTT
GTATTTCAAAAAGTTGTATAAAAACTAAATTATGTGTGGAAACCGAAATGCTTGTGCTCAAGAAATTATGATTATAATCT
GAACTGTAGAAATTAGGTGATCTTAATGCCTGCATAAAGTGTAAAACAAACTGCAAGAATGTACAAATTATTAACTGATT
CCGTCCGCACCCTGACAACTGTGTTAACTAACTTTAAGATCTAAAAATAAAAACTAATTTATATAAAAT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        CG42238-RA
        FBtr0290305
        2437
        CG42238-RB
        FBtr0290306
        2408
        CG42238-RD
        FBtr0331200
        2234
        CG42238-RE
        FBtr0347554
        3408
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        CG42238-PC
        FBpp0303626
        100
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        CG42238-PA
        FBpp0288744
        148
        CG42238-PB
        FBpp0288745
        100
        CG42238-PD
        FBpp0303627
        100
        CG42238-PE
        FBpp0312587
        100
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Extended 5' UTR based on RNA-Seq and/or EST data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CG42238-RC
        Secondary FlyBase IDs
          References (0)