FB2026_02 , released June 18, 2026
FB2026_02 , released June 18, 2026
Transcript: Dmel\HDAC4-RI
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General Information
Symbol
Dmel\HDAC4-RI
Species
D. melanogaster
Annotation Symbol
CG1770-RI
FlyBase ID
FBtr0333333
Feature type
mRNA
Associated gene
Dmel\HDAC4
Evidence Rank
Length (nt)
6559
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 27 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGATATCGATGTGGTTCCAGCTCTAATAGTCGTGGATTTCGGAACATTAATTTGTATTTTTTGCGTCGCGTCGCCCCAGA
AAGTCCAATCCAACAGCAAATCGCGCGTTTTCCAAAGAACAACAACCCCGAAAAATTCGAAAATAATAATTTTCTTGTTT
TTTTTTTCTGTTTTCCTGCGGCAAAAATTCCAATTTTTTTCGTAACATCTAAACAACAACAACAAAAAAAGTGCGTGCGC
GTGCAGAAGCGAAAAAAACCGAATAAATTGTGGGCGAATCAACAAGCAAAAGAGAATGAGCGATGATGAGGAGAAGAGGC
AAAAAAAGCAGAGGCAGTTGTCGTAGTACTAGTACCAAAAAGAAACTGCGAAAACTGCTAAAGTGACAAAAACAACAACA
GCAAGTAACGAAAGAGAAAAGCAAAAGAAGGTAAAAAGAATGAAGGCGAATAAAAAATAAGCGCAAAAATATACGTCTAC
AAAAAAGCAGCAGCAACAACTACACAAAAATTAACTTAAAAAAGTCGTGAATTCATCGTTCAGTATATATATATATATAT
GTATATATATATATAAATCAACACACACACATACGAAGAGTGAGAGCGAGAGAGCGTGCGTTATTTATTTTATATTTTCG
TTAATCATTTTTCGCATTTTGTGAAACAAGTTGGAAAAGCGACAATACAAAATACAGCAACAACAATAGCAGCAGTAAGC
AGTTTGCACCACTTGGAAGAGATCTGCCATCAGAAGCCGGAAGCGATGAGCGATTGCTGCACATAACGCCGGCCACTCTG
ACATTGGACTTCAAGCCCCATCCCGCCGTGGATATCGATCAGCAGATCATGGAGCTCAAGAAGAGCCAGGAGCTGCAAAA
GCAGCGGCTTATCAACTCGTTTCAGGAGCAATCGAAGCAAATGGAATTGGAGCATAAACTTCAATTGGAGCACAAGTATC
AATTTGCGGTGAATTCACATGGCGCTTTCCAGGAATTGCGAAACGAGAGCATGGTGACAGCCGCCGCTGCTGCGGTGGCT
CAGGAGCAACATCGCCAACAGTTGCATCAACAGCAGCAGCAACATCAGCAGCAGCAGCAGCAGCAGCAACATCAACAGCA
GCAGCAGCAGCAACAGGCACGCGGCAGGGATGGCATGAAACTCAAGCAGAACTGTAGTGCCAATGCCAGTCCCGAGGTCA
AACAGATTCTCAACTGCTTCATCCTGAGCAGAAAGTCCCAGGCGGCGGCATCGAATGGCACAACGACAACGTCGCCCTAC
AGGAATCGCGGCGTGGTGAAGAGCTCCTCGGGCGAATCCCTCCCAGCTGGAACCGTGACCAGTGCGCATCCGTACAAAAT
ACCTCAGCCGCCACCCTCACTGCTCAAATATGAATCTGATTTTCCGCTGAGGAAGACAGCATCCGAACCGAACCTGCTGA
AGATCCGGCTGAAGCAGAGCGTCATCGAGCGCAAGGCCCGCATCGGAGGACCGGCGGGAGCCCGGCGCCACGAACGACTC
CTCCAGGCGGCGCAGCGTAGGCAGCAAAAGAACTCGGTTCTCACAAACTGCAACAGTACACCGGATTCTGGACCCAATTC
ACCGCCCTCGGCAGCTGCGTTGGCGGTGGGCGTGGTCGGTAGCCGTGGATCACCGACAAGTGCACCCATTCAGGAGGAAA
ACGAGGAGGGCAGCCAATATCAGCCGGGCCAGAGGAGCAGCATCAACGATTTGCCATTGTTCAGTTCACCATCGCTGCCG
AATATTTCGCTCGGGCGACCGCATTTACCCAACTCGGCGCAGGCGCATGCCCAGGTGAATGCCCAGGTTGCTGCCCAGGC
TCAGGCACAGGCCCAGGCACAGGCACAGGCGCATGCCATGTTCGCGGCACTGGCTGCCGCCCAGGGTGGCTGCGGACAGC
CGGGCTACTATAATCCACTGGGCATGGCATTCGTTGGCCGGCAACCAGCACCGCTGGCCATGATTCCGGCCACGGGGATA
GCACCGCAGCAACCGTCGCCGGTGGTGCGCAGTGCATCGGCCACTTCGACATCGTCGTCGCAGGCCTCGCTGGTGGGCGA
TGTGGCGCCACCGCAGGCTCATGCCGCCTCCACCATTCTGCCCTCGTCATCGTCCTACATGCAGCAACTGGGCAGTGTGG
CCGGTTCGGGTGTTAATCTCCATGCCGCCGCCGTTGCTGCAGCGGCAGCAGCAGCAGCCGCCGCCGGTTCACTGCCACCG
ACCAATAGCCATGGTCACGGACACGGTTCCCACGCACATCCACATCCACATGCCCATGGACACGGGCATGGCCATGGCCA
TGGTATCTACGCTGGCCACCAGCACAATGTGCCCATAACGGACGCCCAGGTGGCGCAGGTGCATCTGCACAAACAGGGCC
ATCGGCCGCTGGGACGAACGCAGTCGGCACCACTGCCCCTTGGACATCCGATGCTAACCGGAGCTGTGCAACTGAATGTG
GTCCAAACGCACTACGAGAATAGTGAGGCGGAGCGCCAGGCGTACGAGCACCAGGTGGTGAACCAGAAAGTCCGCCAGAC
CGTCCTGACTCGCAGCGGAGCTGCTGCAGCAGCCGCTGCTGCCGCCGGCGTGAGCGTGGTGCGTGAGGCACAGTTGAAGG
AGGAGGATGACGACTCGGCCGCCGAGGTGATGGACCTCACAGATAAGAAAAAACCGCCGAAGACGGTGCTAACCAGCACG
ATAGCCACCAGTACGTCCCAGAATCTGCCCGAAGCTTTGGCGGCGGCGGCGGCGGCAGCCGCCTACCGTGCCCCGCACAA
CGCGTCCAGTAACTCCGCCTCCGCCACAAAGTCCGGTATTAAGCTGCGGGACCAGGAGTATTTGCAACAGCAGCGGGAGC
AACTATTGCTCCTTCAGCAGGAGGAGGAACTGGCGAAGAGCCTAATGCGTCCGCTATCGCGAACGCTTAGCAGTCCGCTG
GTGCCGCTGGGGCCACATGGTCTTAGTCAGATTCCCGACACTGGACAACAGCCGGCACCGATAGCCACATCCTCGTCGGC
CGATCATATACCGCCCGTTAACCTCTCGCTGCCGCATCGCCAGCACCGCCAGCTAATGAGCACACTATACGCCAGCCAAT
TGCGTAACCACCAGCCATCGGCGAGTGGTTCACCGCCGCACAAGGTCACCACCGGTTTGGCCTACGATCCGCTTATGCTG
AAGCATTCGTGTATTTGCGGAGACAATGCCCAGCATCCGGAGCACAGTGGTCGACTGCAGAGCGTGTGGGCACGGTTAAA
TGAAACGGATCTGGTGAAGCGTTGCGATCGCCTGCGCGCTCGCAAGGCGACACAGGAGGAGCTGCAGACTGTGCACACCG
AAGCGCATGCCATGCTCTTCGGTTCGAATCAGTGCCAGCTCAGCAGGCCCAAGTTGGAAAACACGTTGTCGGCCAGCTTT
GTGCGTTTGTCGTGCGGCGGCTTGGGTGTGGATCTGGATACCACGTGGAATGAGCACCATACGGCAACCGCTGCACGAAT
GGCAGCCGGTTGTGTTATCGATTTGGCACTGAAGACGGCCAAGGGTGACCTGCGGAATGGCTTTGCCGTTGTCCGGCCGC
CGGGCCATCATGCGGAGGCCAATTTGGCCATGGGCTTTTGTTTCTTCAATTCGATAGCCATTGCGGCCAAGCTGCTGCGT
CAGCGGATGCCCGAGGTGCGGCGCATCCTGATCGTCGATTGGGATGTGCATCACGGCAATGGCACACAGCAAGCATTCTA
CCAAAGTCCCGACATTCTATATCTTTCCATACATCGACACGATGACGGTAACTTCTTTCCCGGCACAGGTGGACCCACAG
AGTGCGGCTCCGGTGCTGGTCTCGGCTTTAACGTGAACATCTCATGGTCTGGGGCACTTAATCCGCCACTGGGCGACGCC
GAGTATATCGCTGCATTCCGTACCGTTGTGATGCCCATCGCGCGGAGCTTTAATCCGGACATTGTGCTGGTATCCTCCGG
CTTCGATGCGGCCACCGGCCATCCGGCACCGCTGGGTGGCTACCATGTCTCTCCGGCCTGCTTTGGGTTCATGACCCGCG
AACTCCTTCAGTTGGCCAACGGCAAAGTGGTGCTGGCCCTCGAGGGCGGCTACGATCTGGCCGCCATCTGTGATTCCGCC
CAGGAGTGTGTGCGGGCGCTGCTCGGCGATCCCGCTGCTCCCATTGCCAAGGCCGAGCTGGAGCGCCCGCCTTGCCAGAA
TGCCATCAATACGCTCCAGAAGACGATAGCCATACAGCAAACGCATTGGCCCTGCGTGAGGATGCTGGAGCACACGGTTG
GCTTGTCTGCGCTGGAGACGCTCAAGGTGGAGCACGACGAGTCCGAGACGATCAACGCCATGGCTGGCCTCTCGATGCAG
TCGATGCACAGAACTCTATCCCGCGATGATTCCGAGGAGCCGATGGATCAGGATGAAACCAAATAGAAGGCGATGCAGAC
GTATATTGCGGAAGAGGAGGCGGTGGGCGTGGCGAGGTTTTTGTGGACCTGGTAGAGTGGGAATGGCAGGAGGGGGCGTG
GCCGCAAGCTGCTCAATGCACATTTAGTTATTTGTTGTAGTTGAATTGATTGTTGTTGCTGTTGTTGTTGTGGCGCTCGC
TTGCAATTGTTGTCGTTGTCATTGATCGTCTATAGCCACATCTATCTCTCTCACTCGATCGATTATAGCATCCCAATTCC
CCGCCCCGCCAAAAAAAACAAAAAGAAGAGAAACATCGAAAATATAGGGGAACATGTCTAAAAGAAGCAGAACAGGGCCT
AAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAAAAGAATCCTTTCAAAAAAAAAGGA
GATTTTATATGAATATATATATATATGAATATATATGTAGCTTAAGCTCAGAATTTAGTTGTAGAAGTCATCGAGATTTT
TTTTTTTTGTTTTAAGGTGAGAGCAGAGGTATTTTAACGCACACACAAACACACGCAACTCAATGTATCTTATTATTATT
ATTTAAGTAAGTGTGTCAAAAGGATATAGAACCACTAACGTACTGGTGAACATCATCAGTAAGCTATAAAGATAATGTTT
AAAGAGGTCGGGTGCAAGAAGCATGTGTTTTTTTTTATAAGGTAAGGTTCAACCTCAAAGTTCCCAAGTCTAGACCCCAC
CACGCCCACTTATCCGCCATCGCTTACAGAGATCGAGTGGGGAGTTGATTACATGTTATGTAGAATGCTTTAGTTGATAA
TAAGATATGAGAAAAAAAAAACTTAACAACTAACTAGTTGGATGAAAAGCGAAAAAACTGAGAAATCTTTTTGTACAATT
TATAGTTTAGTGCAAGTTTCAAGTACAACATGCTATTATTTAAAGAATTCTATATATATACATATATATATATATATATA
CAAAAAAAATATATATTGTGCAATAAATGTGAGAAAATGAAAATCGCCACACAAAACAGAAACTAAAACGAATAAGAGAA
AATTTGTTGTTAAATGTTGCCGAGATCTTATATACGTATGTATACCTAATAACTGTTACAATAATAACCCTTTATATATA
TAACTATATAAATGCACATGTGTATTCACCATGTGTGTAACGATAACGATGTTCAACAAATGTCTGAAATGAAGTAAAAC
TATTATTATATGTAAATAAAACACAAAAAACAAAGAGAACAATTTTAATAAAAAAAAAGCAACAATAAAATACAAAATCA
AAGAAAATATCCACGCTCACACACACACATACACACACAAACATATATACGTCCTGGGCAGGACCCGAGAGGCGTGAATC
GGGAAAAATTCTGAAATAACCGTTCAATCGCTAACCGTTAACTGTAAAACCGCTGTAACTGTATTTGTACTCGTGTACCT
TTAGCTGTCTATAGCCGTCTCTCTCTAACTCGCTACCTAACTGTAAAGGAGCACCTCAATAACGAAAGAAGAAGGAGCAA
CAGACAAGGATCAAAAATATATAGCAAGTGAAAAGGATGATGGAAAGAAGGAGGAGGAGGAGGAGAAACAAGAAAAATAA
GCACAACGAGAGATGGACCGATTGGCTCCAACTGGATGAAACAATTGTTAACAAAACGAAACAGAAACTAAAAACTATCC
TTAAAAAAAAATGAAATCACAAATGTAACTATTAATCTAAGCGAAGCATATGCCCTTGCCATTTTTATTTTCTTATTATT
CACCTGTTTTCTCTTTTCAATACAGCAGATTTTTTGAAAAACATACTTTTGAACATAAGCTGTTTCGTATGCAAGCCACG
TAATTGCTGTTACTTAGGAATATATATATACGAATTTTTCTTGGGTTCCAAAAGCGTTACAATACGCTCTGTGTTAAATC
TGTGCTTTTATTTTAATTTTCTATTTATAATTTGGCAAATTGGCGATCTCCCCTTACCTTACCTTTTTTTATCTTTCCTG
AATTTGTTTTTTTTTTACCAAAACACGAATTATGAAGAGGATTCTACTAACAAGATGAAATATTATTGTTGCGCACTGC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        HDAC4-RB
        FBtr0073798
        5182
        HDAC4-RD
        FBtr0301298
        6312
        HDAC4-RE
        FBtr0301299
        5299
        HDAC4-RF
        FBtr0308576
        5487
        HDAC4-RG
        FBtr0333331
        6876
        HDAC4-RH
        FBtr0333332
        6510
        HDAC4-RJ
        FBtr0333334
        6248
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        HDAC4-PI
        FBpp0305525
        1205
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        HDAC4-PB
        FBpp0073629
        1181
        HDAC4-PD
        FBpp0290513
        1252
        HDAC4-PE
        FBpp0290514
        1203
        HDAC4-PF
        FBpp0300800
        1242
        HDAC4-PG
        FBpp0305523
        1269
        HDAC4-PH
        FBpp0305524
        1181
        HDAC4-PJ
        FBpp0305526
        1205
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722) and RAMPAGE TSS data (FBrf0220331.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        HDAC4-RI
        Secondary FlyBase IDs
          References (0)