FB2026_03 , released September 17, 2026
Transcript: Dmel\Cip4-RJ
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General Information
Symbol
Dmel\Cip4-RJ
Species
D. melanogaster
Annotation Symbol
CG15015-RJ
FlyBase ID
FBtr0333570
Feature type
mRNA
Associated gene
Dmel\Cip4
Evidence Rank
Length (nt)
3477
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 80 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        ACACATTGCGGTCACACTGTGTATTGATGCCGAAGTGAAAAAACGAGCGGAAAGTTGCGAGCGGATAAAATTGTTTTTTC
GCACGCCAAAAAGGAGAAACAAATGCTTGCGTTGTTGGCAAGCGGATCGAGCAGAAGCAGCAGCAACAACAAACTGGCCG
AATCGGAAAACTCAGCGCAAAACTCCAACAACATGAGTTGGGGCACCGAGCTATGGGATCAAAACGAGAATCTGGCGATA
CACACAAACAGAGGCATCGATGCTCTGGACAAGTTTGCCAACTTCTTACGCGATCGAGTGGCCATAGAAACGGAATATGC
CGGCAAATTAAGGCGCCTAGTGAAAAACTACCAGCCCAAAAAGAAGGAGGAGGAAGACAATGAATTCACATCGGTGCAAG
CGTTCCGCAATCTGCTCAAGGAGGTGGGCGATCTGGCGGGACAGCGCGAGGTGGTGTCCGAGTCCCTGCAGCTGCAGATC
ATTGCGGGAGTGACGCTTCTGTCCAAGACATTGCGCGAGGAACGCAAGAAATGCCTTAGCGATGGTGCCACCCTGCAGCA
GAACCTCACCACACAGCTCTCCTCGCTGGACCGGGCCAAGCGGAACTACGAGAAGGCCTACCGTGACTCGGAGAAGGCGG
TGGACAGCTATAAGCGGGCAGACATGGACCTCAATCTCAGCCGGGCCGAGGTGGAGCGCTACAAGAACGTGATGACGTCC
AAGATCCAGCAGTCGGACGATGCGAAGAACGAGTACGCTAACCAGCTACAGAAGACGAACAATCTGCAGCAGCAACACTA
CAGCATGCTGCTGCCCTCGGTCCTCAATCGGCTGCAGGAGCTGGACGAGAAACGCACCCGTGGCTTCAGGGAGTTCATTG
TGGGAGCGGCGGATGTGGAGTCATCGGTGGCGCCAATCATAGCCCGCTGCATGGAGGGTATCGTGAAGGCCGGCGAGTCC
ATCAACGAAAAGGAGGATACCTTCAAAGTCATAGAAAGATATCAATCTGGTTTCACGCCACCAAGGGACATACCCTTCGA
GGATCTGTCCAAGTGCGATCCGGATTCCGTGCAGGACTCACACTACAGCAACTCGACATCGAACCACCTGACCATTAGAG
GCACGATGAGTGCCAACAAGCTGAAGAAACGCGTGGGCATTTTTAACATATTCGGCAGCAATAAGGAGGACTTCAGCGAT
CTGCCACCGAATCAACGAAGAAAGAAACTGCAGGCGAAGATCGCCGAACTGACACAGAATATCGCCCAGGAAACAAAAGC
ACGGGATGGCCTGATGAAGATGAAGATCGTCTATGAGGCGAACTCATCGCTGGGCAATCCCATGACCGTCGAGGGACAAC
TGAACGAGTCGGAACACAAGTTGGAGAAGCTGAAAGTGGATCTAAAGAAGTACCAGGGCTTCTTGGAGAAGGCAAGCCAA
GTGCCGACGGCCACCAGTAGTCCGCAGGCGAGTCGAAATCAATTGCAAAACGGTCACCGAACCTCTAGACATTCCAATGG
CAGTGCCGATGACCATCATGATGATGGCGACGACCAGCCCGATGATGCTGGCAGCTTAAGCAGTTCGGCAAGTCCCGAGA
GTGGCCTTGGCACTTCGCACACATCCCTGCCAGGATCAGGACAGGGCAGCGCCAACGAAAACGCGATTGGCGAGGATACC
TACTATGAAACGGAAGTGGAGACCCTTAATCCAGTGGGAAAATGTCGTGCCCTGTATCCATTTGAAGCCTCCAGCGAGGG
TAGCATACCCATGAGTGAGGGCGAGGAGCTGCAAGTGATCGAGATCGACCAAGGAGACGGATGGACGCGGGTGCGGCGGG
AGAACAACTCCAATGGCTGGGACGAGGGCTTCGTGCCCACGAGTTACATCGAGATCACGCTCTATGCTTAGGATTAAGTT
CATTTTCGGGGCGGGCAATCAGCCGGGCGGTTTTAAATGTTACCTACTCAGCAAACTCTTGCGTATGATCGATTGATTTG
TGTACTTTTGTCATAACTTTGCGTTCTGTCGGACAGCCATAACACACAAAACATAACATAACAGACACAACACGCCTAAC
TTTCACACAACACTGTACATTTGACTTAAGCTAAGTTCGATTCATTTACCCTTCGTATGCTTTGTATATTTACTTTGATT
TTAAACGTCATTGATCTTATGGTAGTGCAAGCTATATCATACTATAAATACTATAGTCATATGCACCTACGAGCAGACCT
CACCTAATTGTAAGCACCGCAACGTTTCCCTCTTCACCACAACAATCATGATAACACCTATTTATATACATATATGGAAA
AAGATTTATATGACACTTGAATACGTGAGAGCATGAAAAGGAAAACTTAAACTGAAACTTAAACTACAGCCGTTGGACAT
TAAAAGTAATCTTGTGAACACGTTCTCACGTGCAATCCATTTGGCAATGTGTTGATAATACTTACTTTTGCACGGTTCTC
GGCTTTGGCCTTAGGAGCACCCGTCACCTTTCCCTCAGACCAATTTGGAAAGGCGGCAGAGTGCGATTTCCTCAAATTTA
AGCACTAAAACTTTGGTAAATATGCAAAGATCAAGCGAGCGGACATCGATCCCATCCCATATATACACACACACCCGAGA
CTCCAGGAAATGTGGGCAAAAGTTATGGCAATCCTGCATGACATGCGGCATATGCAATTGCGGAAGCAGAAGAACGCGCT
AGCTTGTTTTATATAAATAGCAACAATTGTACATTTTACTTTAAACCACTCTATGCATAATTCGTAATCTTAATTTGATG
ATAATTTTGTATTGCTCTTGGCCTTGTACATTTTCACACACTATGTTTAATGGGACGCGAGAAGCGCATTCATGCCGAGA
TAGTGCATCGATTAGTTATGTTTTAGGAATCCCTATACCATTAAGTTCACAACATTAAGGCTTAAGTCAATGCAAAGCCG
GGCGGCAATGACGCCACTTTGCAATACATTTATTTATACTTTAATATGATATACCGCTGTATATTGGTAAACCACAATCA
AAAACATGAAACGGAAGTCTGCGGATAAAGTCCAGGCGGAGCGAGATAGGTCTTTAGTTAGATATTCAGCAGCCTTCAGT
ATCTGCATTTTGTACTTTCATTTCGCATAGATATGCTACCATGCTTTAGCATTTAAGTGTGCAAACAACTGAAACTGATG
AATTCTGTTTTTCTTACGTTTAATTACACGATGTAAACGAATGACGATGAACTAATCTTAGTGCGAACGCAGAAAATAAA
TAATTCCAAAATTCTTAAATTTATCTAATTTTAAATTCGAACCGAAAACAGGCACATACGTATTACGCTATAATGTTTAC
GACATCAAATGGAATGAGAGTAATTGAATTTAAGTGACAGACTACGGCAAAAGTATGTGAGAATCGTCGGCTTAATAAAA
GTAACTACAATTAAAACATAAAGCTGATCAGCATTTG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Cip4-RA
        FBtr0073339
        2525
        Cip4-RB
        FBtr0113138
        2637
        Cip4-RC
        FBtr0306094
        2468
        Cip4-RD
        FBtr0306095
        2580
        Cip4-RE
        FBtr0306096
        2504
        Cip4-RF
        FBtr0306533
        2414
        Cip4-RG
        FBtr0306534
        3507
        Cip4-RH
        FBtr0308201
        3422
        Cip4-RI
        FBtr0308202
        3359
        Cip4-RK
        FBtr0333571
        3504
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Cip4-PJ
        FBpp0305747
        602
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Cip4-PA
        FBpp0073195
        631
        Cip4-PB
        FBpp0112051
        665
        Cip4-PC
        FBpp0297231
        612
        Cip4-PD
        FBpp0297232
        646
        Cip4-PE
        FBpp0297233
        624
        Cip4-PF
        FBpp0297491
        628
        Cip4-PG
        FBpp0297492
        612
        Cip4-PH
        FBpp0300521
        644
        Cip4-PI
        FBpp0300522
        623
        Cip4-PK
        FBpp0305748
        611
        Comments

        Extended 3' UTR based on EST and RNA-Seq data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Cip4-RJ
        Secondary FlyBase IDs
          References (0)