FB2026_02 , released June 18, 2026
Transcript: Dmel\Rfx-RJ
Open Close
General Information
Symbol
Dmel\Rfx-RJ
Species
D. melanogaster
Annotation Symbol
CG6312-RJ
FlyBase ID
FBtr0337107
Feature type
mRNA
Associated gene
Dmel\Rfx
Evidence Rank
Length (nt)
4694
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 4 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CCAATTAGGACGTGCTCAATTCCCCTGAAACAATGAAAATTAGTAAAAAGAAGTGACAAATTTTGCAGAGGATTATGAGA
TGTAAAGAGCTGACCAGGCGAAACCCAGAAGATGTCAACAGTCGTGATTTTTACGTGTGTTTGTTGTTTTGTTCTGTTGC
CTAGCAACAAAAAAATCCAAAACACTAGCCATTTCCTTCCGGTCCCGTTACTACGTCGTAATCCAGTTGGAAAACCAAAG
GATTAGCAGGAATACCAATTAGAAAAAGGAATCCCCACGAAATCCCCAACGAATATTGGATAACAAACTTCGGAAAGGTT
TTCAAAAACCCAAAATATTGCAAATGAGTTCCAGGAGCCGAGCTCCCTAGTCACTAAGCATCTCCACCAGGGGCCACTTA
AAGAAGCCGAAACATTGAACCTAAACACCGCCATTGCCTTAGACCTCGAAGACGAGTGAATAACTAGTACTAGAGGGATC
TAGAATAGAATACGAGCTTACCTACTTAGTCAACGAATTTAGCAACCCAGGTGCAGCCACTACCATCATCGGAGCAAATA
ACTTTGTGGAGTAGCGAGCGCAAAACATCAAACCCCAATGACCACACGCCTGGCTCCACAGCGCCAGTTCATCCTCTCGA
CGCGCTCTGCCATCGTGGATGCCACCTCGCCACCTGAGGACTCAGCGGAGGAGCAGCAGCAGCTGACTGTCGAGGTGGAG
AGCGCCACCAACGGAGTCATTACCAATAGCACCACATCGCCACCGCCGCATGCCGAGCAGTTCGAGTTCTGCACGGAGGA
TGGAGTCGTTGTGTCCGCCACACTGGAGGATGTCATGACACAGGTAAAACTTTTCCCCCTCTTGCAGAACTGCCAGCTCT
TGCAGAAGAAACTAGTCGACGAGGACGACGATTCGACGGGAGTAGGAGCAACGGATGCCGATCAGCTGGAGGTGATTAGC
GTTGTACTGCCCATGGATGCCGAGGACTCGACCAGCGATGCCCATCTACACGGGCATGTGGTGAACAGCAGCAGCGACAC
CATGGGTACCATTACCACCACGGAACCGAATGGGACCACCGTCACCCACTCGATACCCATTCACAGTATGGCCGATCTGG
CCGCGATCAAGGATGGCGTGGATCTGGCCCAGCAGGTGGCCAATGGCCAGGTGACCGTGGTGCAGACCACCGAGGACGAC
GATGGAACGCCCTTCATTACCGTGACGGTTTCGGGCCAGGAGCAGAACTACCAAGTGCAATATGTGGACTCTGAGCTGTA
CCACAGCAACTCAAGCCAGACGCAAATGACGTATCCGTTCTGCCCAGTGGGGGACTACCAGGGCAACGGCCAGACGGCGT
ACTACTCGACCACGGGTCAGTACGGAACCACCTCGTCGGCCGGAGGCTCCTCGAACGGAGCTCACTCCACGACGCTGCCG
TACCTGGTGCCCGTGGAGGAGGGCATCCTCCTCAATGGTTCCGCACACTCGCTGTCGCAGTCGCAGTCACAATCGCATGG
ACGCGATTCGCCGCACAGCCTGACGGAGGTCGCGTACATCCAGGAGGCGCAGAGCACGCCCCAGACGCCCACCTCGACGA
CCACGACCCATTCGGCTAGCGGCGGCAGCCTGGGAACGGGCGGTGGAGGCGCCTCCCCGGATTCCGACCAGAGTGCGCTC
GGCAGCAGCAACAAGATTGCCTCGGCAACGATCAAGTGGCTGTCGCGCAACTACGAAACGGCGGATGGTGTGAGCCTGCC
CAGGAGCACGCTGTACAACCATTACATGCAGCACTGCAGCGAGCACAAGCTAGAGCCCGTGAATGCGGCCAGTTTCGGCA
AGCTGATACGTTCCGTGTTCTCCGGACTGCGCACACGTCGCCTGGGCACGCGCGGCAACTCCAAGTACCACTACTATGGT
ATCCGCATTAAGCCCGGCTCGTTGCTGAACAGCCAGGCGATGGACGACAAGCAGATGCTGGCCGCCGGCTACGGACCATC
CTCGGACGGAACCGGCGGACCAGGCAGCGGACCGATGGTCAGCGTCACCAGCAGCACCGCCGGACAGCTGACCGGATCCA
ATGGATTGGGCGGTGGCCATGGCCAGCGGCACAGCAACGGCACCAAGAAGCACACCTTCAAGCCGGAGACCTACGAGGCG
TGCATTCAGTACATCGGCGATGGAACCAGTGCCCTGCCCTCGTTTCCGCCCATCGAGCTGAACCACAGCTTCAACAGCGA
ACTGACCCTGGAGGACGTGGACACCTTCCGGGGCCTGTATCGGGAGCATTGCGAGTCCTTCCTGGACGCCGTGCTCAATC
TGGAGTTCAACACCGTGGAGTTCCTGCTGCGCGACTTCTGGCGGGCCAGCGACAACAATAATCTGGACGAGTGCGAGGAG
GAGAAGTACTTGAGCAAGACGAAACTGTATCTGTTGTGCCACTGCGCAGAAGTGCAGAAGTTCGTGCGAGAGGTGGACTA
CCAATTCTACCAGAACACCGTCGATGTCATCATACCGGATGTGCTCCGCTCCATACCAAACGCCCTGACCCAGGCCATCA
GAAACTTCGCCAAGAACCTGGAGATCTGGCTATGTGAGAGCATGCTGGGCGTGCCGGAGCAGCTTGCCCAGATCAAGACC
AGTGCCGTCTCGGCATTCTGCCAAACGCTGAGGCGCTACACCTCGCTGAATCACCTGGCGCAGGCGGCTCGAGCAGTGCT
CCAGAATGGTGCACAGATCTCCCAGATGCTAAGCGATCTCAATCGTGTCGATTTCCACAATGTTCAGGAGCAAGCTGCCT
GGGTGAGTCAATGTGCGCCCGCCGTGGTCCAGCGCTTGGAGAGCGATTTCAAGGCCGCTCTGCAGCAGCAGAGCTCCCTG
GAACAGTGGGCCAGCTGGCTGCAACTGGTGGTGGAATCGGCCATGGAGGAGTACAACGGGAAGCCGACTTATGCCAGAGC
CGCCCGCCAGTTTCTGCTAAAGTGGAGCTTCTACAGCTCTATGATCATTCGTGACCTGACGCTGAGATCCGCCTCCAGCT
TCGGGAGCTTCCACCTAATTCGCTTGCTGTTCGATGAGTACATGTTCTACCTGGTGGAGCACAAAATCGCCGAGGCACAA
GACAAAACAGCCATTGCGGTCATTTGCGAAAGAATGAAAAAGGACATGGACTTTGAGTTCGAGTGCCAGTTCGCCTACAT
TACCAGCGACACGGAGCACCAGACGACTCCGAGCTCGGCCAGCAGTGGAGGCGACGTGGGCAACGAGGCCAAGCGACTGA
AGCAGGAATGAGGCCCCGAGATTTGGATGTCCATGTGGATGCAGTGGCTGGCATGGAGCGGCATATTCGTAGTGTTTATG
TAACCAGTAACCGTTGACCCCATCAGTGTGCACCCCCAGCCCCTGTCGTCACCAGTCATTCAGCTCTGCATTTAATAATG
GAACCGTGTTGTATATCCGTAATCGTATCGTATCTGTGTGCTAGTTTATAGCCCTTAGTTCCCTCACAACCAGCGTAGTC
AGTCAAAATTTTAGTCGTTAGTTTTAGGCAGGATCCTCACTCATATGCAGGAAAAGATCTTTTGGACGGGCACTTGCGAA
AATAGAAATGTCATGATATTGTTCACTTTTAACCATTTCTGTTGGAGATTAGGCAAACTGTTCACTGAATGTACGTTTTC
AGAGTATATTACTTTTGGTTTAGTAACTAAGCCATTGTTTTATGATATGGGTCTTAGCTTGTTGACCGCCCAAGGGAGCT
TTAACTGGGATTTGTCGAGTGTTGGACTGCCCCCGCATCGAAGTGAAGAGCCGTCCAGAGAGCAAGCAAGTTGAAAGCCA
GTGCGACAGCATCGTCTGGTCTTGTCTGGCCTGATCTGTATTCGTAGGATACGTTTTAGTTTAAGTACATGTGCATTAAT
AATTGTAATCAACTGTCTACGATAACGATGGGTTTGGAGGTGGCATCAGTTTTGTCTGGTTTCAACAAACGATCTTGTAT
ATCATAGCGCACGGCGCACACCACACACATAGTCTTAGCACCCACACGCGCACTCAGAGGAATTAGTCAGGAAGGATATA
GATTATAGCGAAGGAACACAGCTCACATCGAACAGCTTGCTCAAGTTGAAGTTCAAGTTCTAGAGGAACACCCAGCTCAA
AACTCAAAACGCAAAACACAAACCTAAGCTAAGTAAACAACAGGCCTTAAATGTGCAAAGATGAACACTCAATTTTGAAA
CAATACAATTTACCATACCTATATATTAATTATACATAAAGATTCATAAGCGTACGTGTATGTATATTTTAACTACAAGG
AATCATTTTATTACGAAACATGTATTTTAACAGAGGCGCTTATCAGAGTATTTTATGCCATTTTGGATAAGAGTACGAGC
AGCTAGCGAAACTGTTTTTTTAAGTCAACTAAGGGGTATGAGATACGCAGGACACGAACTGCATCGGTATCCAACAGTCT
AGTCCTAGAAAGCACACATCTGAATTATATGCTCTGTACGGCCCAAGAAACCGACGATAATTACCAGCATTTCCTTTGTG
GGAACTGGTTTTGCTCAAATTGCGAAATGCTTAGCTAGCATCTAAGTTCTATTGGTTGTTGAAAAATAAAAGTAATTTGA
AAACTGAAATTTTAAAATGTCAAAACTATTTATGTATGTGAAATAAAAATGGTC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Rfx-RC
          FBtr0305995
          4736
          Rfx-RF
          FBtr0337103
          4329
          Rfx-RG
          FBtr0337104
          3861
          Rfx-RH
          FBtr0337105
          4760
          Rfx-RI
          FBtr0337106
          4268
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Rfx-PJ
          FBpp0308021
          897
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Rfx-PC
          FBpp0297137
          911
          Rfx-PF
          FBpp0308017
          882
          Rfx-PG
          FBpp0308018
          860
          Rfx-PH
          FBpp0308019
          919
          Rfx-PI
          FBpp0308020
          889
          Comments

          Extended 3' UTR based on RNA-Seq and/or EST data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Rfx-RJ
          Secondary FlyBase IDs
            References (0)