FB2026_02 , released June 18, 2026
Transcript: Dmel\alka-RC
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General Information
Symbol
Dmel\alka-RC
Species
D. melanogaster
Annotation Symbol
CG12344-RC
FlyBase ID
FBtr0339477
Feature type
mRNA
Associated gene
Dmel\alka
Evidence Rank
Length (nt)
2731
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 5 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          AGTTCTGTTTAGTTCCTGAGCGAAGGCGAACGGACTCGGGCGCGCGTCGTTCCCGCAGCGCGAAACCGAATTATGATATT
CCCACGTCGGTGTAAAGTGAGATGATTTGAGGTCTGTGTGTTACAAATCCTTTCCCGTGCCGTCGCCCCAACATCATGCT
CGACAAATTCAACACAAACGCATTCATATCGTTTGGACTGGGATTCATACTGATGTGGCTGAGCGAAGCCACGGAAGCCC
ACATGAACTACACAGCCAAGCCGCGAGTAGTTCTTCCGCCTAATTATGTCAAGGAAATACGACCGCCCTCGAAGAAGGGC
TCACCAGTGATAGTAGACTTTAGCATATTCGTTGTAGATATTAACTCAATTAACGTAGAGGATATGGACTTTAGAGTAGA
CATGTTTATACATCAGCGCTGGCTGGAGTCGCGTCTGGAGATCCCAGATGACATATTCGAGGAGGGCGACGACTACGTGA
CGCTGCTTCCAGAGGTCTTTGAGAATTTTTGGCAGCCGGATCCGTACTTTCTTAATTCCAAAATTGCCGAAATAGCGACA
CTGACCCACAAGTTCACGTCGGTGACGCTCTACAAGAACAAAACGGTGCGCTATGCGGCCCGGATGCATGCGATCATCGC
CTGCCAGATGGAGTTCCAGCTGTACCCCATGGACATCCAGGTGTGTCCCATCTACATCGAGAGCTTCTCGTCGAACAATC
AAAAGGTTAAGCTGCGCTGGTCCGACTCCGGGGTGACCCTCAATCCGGAACTGAAGCTGCTGCAGTACAATCTGGGCCAG
CCGCTGGAACTGGAGGAGAGCGACGGCTACATGCCGGAGAAGGTGGGGAACTTCTCCCGCCTCACCGTATACTTCCGCTT
CGAGCGCCAGATTGGCCACCACCTCATCCAGACCTTCGCCCCCTCATCGCTGGTGGTGATGCTGTCCTGGTTCAGCTTCT
GGCTGGGACTGGACGCCATTCCGGGGCGCGTAACGCTACTGGTGACCTGCATGCTGACCCTGGTGACCATGTTTACGGGC
GCCGACATTCCGCCAGTGGCCTACGTTAAGGCACTGGATCTCTGGATGGCCGGGTGCATGCTGTCCGTGTTCGCCGCGCT
GGCCGAGTTCGTGGTGGTGAAAGTGCTGGACGTGCAGTACCAGTACCAGGTGAACCGCATACCCAAGGTACTGCCCATGC
GCATCAGCAATATGGAGAAGGGTCAGTGTGCGACGGTGGCCAGTTGGGAGGGCGGAGCGGTGCGGTCGCGGAAGGCCACT
CAGACGCCCACGACACCGGGCCAGACATCGCTCCAGGGTAACGGCGGACCGCCGAAGCCAGCAAGACGTCAAAGTCTACT
TTCCGTGGCGTGGACGGATACGGATACCGGCGTGGAGAAGATCATGTGGCGAGAGATCGACAAGGTGTCCCGCGCCGTAT
TCCCCATCCTGTTCTTTGTGTTTGTGCTCCTGTACTGGCCGATACTGCTGATGAAGTCGTCCTAGGATTTGGGGAGCTCC
AGACTGCATATGTCTGGACTCCGTTAAAAAGTCGAACAAACGCGAATATGTTGATGAAACTGCAATTGGACTGGATTTGG
ATATGCAAACTTCAAGTGCAATGCCAGTGACGCTAGGTCTTTGGATGGGAATATCTGGAAACCGAGAGCTCTATGCTGCA
CGTCATCAGAGTACAAGAAACCACAAGGAAAGTCTACAGTTACCTAAATACATCCATCGGGTACATTGAAATGCCAGTAC
TGAGTGTTATGGACTACTTGCTCATATTGTTCATTTGAGTATATGCTTTGTACAGATCCAAACAATACCGATATTATTAC
AATACCCCAAATTATTTCAAATCTATGCCTCAATCGCAAAACAAAACACGTATGTAACTCTTTCGGCAGGACACCGCGCA
CACCCACAGGATGGAATGCTTCGCTACTCAACTATATTAGCCATGATCCCACAAGGATTACCCAAATTTGAGTTTAGTTC
TGCCTTATGCATATACATATATGTATTGTACACCGGATAACAAACAAACGTATATCACTGTGCTAGTGACAATACCCAGA
GTCGAAAGGGTTGTCCCTACTTTCAAAGTATACACTCTCTACAATTGCGAGCTACACGCATAAATCATTTTCGGGCAAAC
GATTTTAATTGAACTTTTGTATTAGGCTTAAGCAAATCAGCCAAGATATGGAATTGGTGCTTTACGAAGATAATAATAAT
ACAATGGCCTCAAAGGATATTTGGATTGTAAATAACGAAACGAACAGTGAATGCTTTTAGAGATTTTTACATATTTAGAA
TTATTTATCCATTATAGCGCATTTTAATGCAAACATTAGAGCTGTGGCTTTTACATCTAATACTAAAATCGACCTGTAGT
TCAAACAGCGCACATCAGGCAGAATTTTTGAAACTATAAACATATATATATACATATATATATGTTAAGCTAAATCGAGT
TTATATTTGATATGGAAATACAAACACAATGTAAATACATTACATCACTACTATATATATTACATGCATATATTTATCTA
GGATTGTAACTGCTATAAAAAGTTAAGTTTATATAAATATCTGTATTCTTTCCATTTTTAAGTTATGTTGTTCACTCAGC
TAATCGTAGTTCAGTGAACCCTCTAACAATGTTATCGAAAAGCTTTAAATTTATTCTTAATAAAAGACAAGGCGCGTACA
TCTATCAAATC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          alka-RA
          FBtr0088246
          2843
          alka-RB
          FBtr0339476
          2831
          alka-RD
          FBtr0339478
          2719
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          alka-PC
          FBpp0308560
          449
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          alka-PA
          FBpp0087341
          449
          alka-PB
          FBpp0308559
          445
          alka-PD
          FBpp0308561
          445
          Comments

          Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG12344-RC
          alka-RC
          Secondary FlyBase IDs
            References (0)