FB2026_02 , released June 18, 2026
Transcript: Dmel\alka-RA
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General Information
Symbol
Dmel\alka-RA
Species
D. melanogaster
Annotation Symbol
CG12344-RA
FlyBase ID
FBtr0088246
Feature type
mRNA
Associated gene
Dmel\alka
Evidence Rank
Length (nt)
2843
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 11 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        ATTCGAGTTCCGAACGGCAGCCGGATCGGAGGGTAAACCTTGCGGATTAAGTTAGCCCCAACCAGGACCCCATATATATA
TATATATATATCTTTTGTTCAGTGTTTGTGTCGTGCAAAAAAAGAAAATAAGAAACAGCCAGAGAGCCAAATAAATCCAA
AATCAAAACAAAATAAACCGAATTATGATATTCCCACGTCGGTGTAAAGTGAGATGATTTGAGGTCTGTGTGTTACAAAT
CCTTTCCCGTGCCGTCGCCCCAACATCATGCTCGACAAATTCAACACAAACGCATTCATATCGTTTGGACTGGGATTCAT
ACTGATGTGGCTGAGCGAAGCCACGGAAGCCCACATGAACTACACAGCCAAGCCGCGAGTAGTTCTTCCGCCTAATTATG
TCAAGGAAATACGACCGCCCTCGAAGAAGGGCTCACCAGTGATAGTAGACTTTAGCATATTCGTTGTAGATATTAACTCA
ATTAACGTAGAGGATATGGACTTTAGAGTAGACATGTTTATACATCAGCGCTGGCTGGAGTCGCGTCTGGAGATCCCAGA
TGACATATTCGAGGAGGGCGACGACTACGTGACGCTGCTTCCAGAGGTCTTTGAGAATTTTTGGCAGCCGGATCCGTACT
TTCTTAATTCCAAAATTGCCGAAATAGCGACACTGACCCACAAGTTCACGTCGGTGACGCTCTACAAGAACAAAACGGTG
CGCTATGCGGCCCGGATGCATGCGATCATCGCCTGCCAGATGGAGTTCCAGCTGTACCCCATGGACATCCAGGTGTGTCC
CATCTACATCGAGAGCTTCTCGTCGAACAATCAAAAGGTTAAGCTGCGCTGGTCCGACTCCGGGGTGACCCTCAATCCGG
AACTGAAGCTGCTGCAGTACAATCTGGGCCAGCCGCTGGAACTGGAGGAGAGCGACGGCTACATGCCGGAGAAGGTGGGG
AACTTCTCCCGCCTCACCGTATACTTCCGCTTCGAGCGCCAGATTGGCCACCACCTCATCCAGACCTTCGCCCCCTCATC
GCTGGTGGTGATGCTGTCCTGGTTCAGCTTCTGGCTGGGACTGGACGCCATTCCGGGGCGCGTAACGCTACTGGTGACCT
GCATGCTGACCCTGGTGACCATGTTTACGGGCGCCGACATTCCGCCAGTGGCCTACGTTAAGGCACTGGATCTCTGGATG
GCCGGGTGCATGCTGTCCGTGTTCGCCGCGCTGGCCGAGTTCGTGGTGGTGAAAGTGCTGGACGTGCAGTACCAGTACCA
GGTGAACCGCATACCCAAGGTACTGCCCATGCGCATCAGCAATATGGAGAAGGGTCAGTGTGCGACGGTGGCCAGTTGGG
AGGGCGGAGCGGTGCGGTCGCGGAAGGCCACTCAGACGCCCACGACACCGGGCCAGACATCGCTCCAGGGTAACGGCGGA
CCGCCGAAGCCAGCAAGACGTCAAAGTCTACTTTCCGTGGCGTGGACGGATACGGATACCGGCGTGGAGAAGATCATGTG
GCGAGAGATCGACAAGGTGTCCCGCGCCGTATTCCCCATCCTGTTCTTTGTGTTTGTGCTCCTGTACTGGCCGATACTGC
TGATGAAGTCGTCCTAGGATTTGGGGAGCTCCAGACTGCATATGTCTGGACTCCGTTAAAAAGTCGAACAAACGCGAATA
TGTTGATGAAACTGCAATTGGACTGGATTTGGATATGCAAACTTCAAGTGCAATGCCAGTGACGCTAGGTCTTTGGATGG
GAATATCTGGAAACCGAGAGCTCTATGCTGCACGTCATCAGAGTACAAGAAACCACAAGGAAAGTCTACAGTTACCTAAA
TACATCCATCGGGTACATTGAAATGCCAGTACTGAGTGTTATGGACTACTTGCTCATATTGTTCATTTGAGTATATGCTT
TGTACAGATCCAAACAATACCGATATTATTACAATACCCCAAATTATTTCAAATCTATGCCTCAATCGCAAAACAAAACA
CGTATGTAACTCTTTCGGCAGGACACCGCGCACACCCACAGGATGGAATGCTTCGCTACTCAACTATATTAGCCATGATC
CCACAAGGATTACCCAAATTTGAGTTTAGTTCTGCCTTATGCATATACATATATGTATTGTACACCGGATAACAAACAAA
CGTATATCACTGTGCTAGTGACAATACCCAGAGTCGAAAGGGTTGTCCCTACTTTCAAAGTATACACTCTCTACAATTGC
GAGCTACACGCATAAATCATTTTCGGGCAAACGATTTTAATTGAACTTTTGTATTAGGCTTAAGCAAATCAGCCAAGATA
TGGAATTGGTGCTTTACGAAGATAATAATAATACAATGGCCTCAAAGGATATTTGGATTGTAAATAACGAAACGAACAGT
GAATGCTTTTAGAGATTTTTACATATTTAGAATTATTTATCCATTATAGCGCATTTTAATGCAAACATTAGAGCTGTGGC
TTTTACATCTAATACTAAAATCGACCTGTAGTTCAAACAGCGCACATCAGGCAGAATTTTTGAAACTATAAACATATATA
TATACATATATATATGTTAAGCTAAATCGAGTTTATATTTGATATGGAAATACAAACACAATGTAAATACATTACATCAC
TACTATATATATTACATGCATATATTTATCTAGGATTGTAACTGCTATAAAAAGTTAAGTTTATATAAATATCTGTATTC
TTTCCATTTTTAAGTTATGTTGTTCACTCAGCTAATCGTAGTTCAGTGAACCCTCTAACAATGTTATCGAAAAGCTTTAA
ATTTATTCTTAATAAAAGACAAGGCGCGTACATCTATCAAATC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        alka-RB
        FBtr0339476
        2831
        alka-RC
        FBtr0339477
        2731
        alka-RD
        FBtr0339478
        2719
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        alka-PA
        FBpp0087341
        449
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        alka-PB
        FBpp0308559
        445
        alka-PC
        FBpp0308560
        449
        alka-PD
        FBpp0308561
        445
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG12344-RA
        (FlyBase, 1996-)
        alka-RA
        Secondary FlyBase IDs
          References (2)