FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\app-RT
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General Information
Symbol
Dmel\app-RT
Species
D. melanogaster
Annotation Symbol
CG42318-RT
FlyBase ID
FBtr0339925
Feature type
mRNA
Associated gene
Dmel\app
Evidence Rank
Length (nt)
4505
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 35 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CATAGTTTTTATTGCTCTTTCGATTGTGTTTCCGCTGCATTTGCCGTCGTTCTGCCTTTGCGATTGCGAGACTGTCTTTG
CAAATTGTCTTTGCGTCGGCGGGTCGTGACTGGATTCCATTGAATATTTTACAAACAGATGATGCATGTGGTTGTCACAG
TTATAACACCTTAACTACAAAGTAAACTCGACAACCAAATGAAGACAAACCAATATCTACTGTATATTATTTTAAAAACT
GTATAATCCACAACTATTTTAACCGAAAATCTGTAAAAAGAAGTCCATTAAACTATATTTTCGTGAAATTAACGCGTGTA
ATCGAAAAGCATTCGAGTACTTAATCATCATCGAAGGCGAATGTCGAAAAGTGTTCCGAGGTCAATGTTTCTGTTTCTGC
TGCTGGCAACTCATCGCCTAAATTAAGTACACAATCTGCAGCGAGGACTGGACTGACCCGCTCAAACAGGACTAAAACCA
GCCAAACCAATTCGACGCCAATTTTAACTACTGTTGGTGGCGCCAGCAGCGAATAGCGAATAATTGAATCATAAAGGACA
CGGACGGGCCACCCAAAAGGATCCAGAATTCAGGATCAACAAAGCCGAGCAAATAATTGCTATATAGTCTGTGTGTGTGT
GTGCGCGCACTGAACGTGGTCTCCCCACCCTCGATTCAGTACTCACCCCCATTTCCGGTGGGTGGAAATAGGGGAGTGGC
AGCAGCACTGGCAAACGAAGACGGCTGCAGGGAAATGACAGTCGTACTGCTTTAATTAAAGCCGGGACGTGGGCGTGTGG
GCGTGAGGCCCGAAAGTGTGCGCTGCAATAAAAGGAGGAAACTGAAACGCAATGTGGCTGATGCCGCGGACCGTGGACAA
CGCAACAAAGTGGACGAAATTGCTTTTGGAACATTACAGGATACCACTCGAGTTGGACAGCAGTAGCGGCAGCAGCGAGC
CAGGCATTAATTTTGATTAAATTCACCTGAGAAAATTCGCCTTCAAATAGCAACTAACAAACGAACGACAAAAACTACAA
ACTACAAAATAAAGCTAAATCAAACTTTAAGTGGTGAATATTTCAAGCAGCGGCGCGGTGTGCATGAAATTCACAGGAGA
TAGCAGCAAACAGGTTCGGGAGCAGCAGGAGACATCTTGTGGAAGTCGGTTTTGCGTGCCGCTGGCATTGCAACAGCTAC
ACATGAACACTTCCCTGTGACACGAGGTGGTGCGGAGCGAAGGGAGGCGTCGTCGGTCGCCAGGACGCCAGGAAAACAGC
ATAATTTCGTCAACGGCAGCCATTTGAACTGTCGTCGCCAGAGCATAACCCACCATTCCCCAGGATCCCACAACCCCAAA
ACCCGAATCCCCATACCGGCCCACATCATCATCAGCAGCAGGAGCAGAAGATTCAGGAAAGGCGTCACTGTCACAGTCAG
CAATTGTTGTCAGCAAAGGAAAAGTAACAGAATCAGTGGAACCACCAGCAGGACCAAGACCTGGCATAACAACACCATCC
TATCCAAAACTTAATACCCCATTCGCCACGACCGCCCCGATGAATCTGCTGTGCTGCTGTTGTTGCAGTAACATGGCACC
AAACCAACGCGTCACACGCAAATGGGAACTGTTTGCCGGACGCAATAAATTCTACTGCGATGGATTGCTAATGTCCGCAC
CGCACACAGGCGTCTTCTACTTGACGTGCATCCTGATTACCGGCACCAGTGCGCTCTTCTTTGCCTTCGACTGTCCCTTT
CTGGCGGACAGCATAAATCCGGCCATTCCGATTGTGGGAGCGGTACTATACTTCTTCACGATGAGCTCCTTGCTGCGCAC
AACCTTCACGGATCCGGGCGTCATACCGCGAGCCTCCAACGATGAGGCCGCCTATATTGAAAAGCAAATAGAGGTGCCAA
ACTCGCTGAACAGTCCCACATATCGACCGCCGCCGAGGACCAAGGAGGTCCTGGTCAAAGGACAAACGGTCAAGCTGAAA
TACTGTTTCACCTGCAAGATCTTCCGGCCGCCGAGGGCCTCGCACTGCAGCCTGTGCGACAACTGCGTGGACCGCTTCGA
TCACCACTGTCCCTGGGTGGGAAACTGCGTGGGCAAGCGGAATTATCGGTTCTTTTATTTGTTTCTAGTCTCATTGGCAT
TTTTAGCTGTATTTATATTCTCGTGCTCTGTGACGCATTTAGTTTTATTGATGAAGAAGGAGCACGAGGTCTTTAATGTA
ATCAAGGCGGCGCCCTTCACTGTGATTGTTGTGTTCATTTGCTTCTTCTCGATATGGTCGGTGATCGGCCTGGCCGGCTT
CCATACCTATCTGACGACTAGCGATCAGACAACCAACGAGGATCTCAAGGGATCCTTCTCCTCCAAAGGCGGTCCACGCA
CCCAAAATCCCTATTCGCGGGGTAACATTTGCCTGAACTGCTGTCACATCCTGTGCGGACCCATGACGCCCTCGCTGATC
GATAGACGCGGCATCGCCACCGACGAGTTCATCCAGCAGATGCAGCACCAGTCGAGTCCGCGGCACGCACTGAGCGATGT
GCTGAGTGCCTCGCACATGGTCACCACCTCGCAGCCCATGATGGGTGGTTTAGGTGGTGGTGGCATCGGTGGTGCCGGCG
GCGGGATCAGCATTGGTGGAGCGGAGCTAAAGCCCCGATTCTACGACGAGTCCAATCCCTCCTCCTCGACACTGGAGGGC
AACGGAGGTGCCATCAATGGCCATGGGAATGGCCATGGCAACGGCTTCGATCATCCGCCGCCCAGTTACGATCTTGTCCA
AAACGGTAATTCCAATAGTCTAGCTCAGCTGGTGGACAACGAGATACCGCTGGTCCAAATGGACATTCCGGCTTATACCC
ACCAAACGGCCACCCAGGCGCGTCAGTACCGCCATCGTCATCACAAACAGCGCCAGATATGCAATGGCGGCACTGTTAGC
TATGAGAATCAGTTGGCCAACGCCAGCAGCGAGGATGAGCTGGATGATCCAGATGTTGTGGTCGTGGGCAGTCCCGAAGT
GGTGGCTGCCGTGGCAGCCATAGCCTCCAATAAGGCAAGAGAAATGCGCAACCGCAGCGGAAGCTATAGCAATCTCTTCG
ATGCTGACTTCGAGGCGGCACTGGTCAACTCCTCATTGGCGGATAACCATGTCAGAGGTGAAGGAGCAAGCAGTTCCGGA
AAGCCCTCTGCGGGCGCAGCTCTATTAGCGGCTGCCATCAGTGGAAAAACGGAGAACATGTATAGCAATGTGTTGCCAGT
GGACAATGATACGGATCCGGCCGATTCCACGCTGCATGTATACTCCAATATCATCGATGAACGCAAGCAGCAGGAACAGG
CAAACAATGTACTGTCCTCCACTCTGCTCTGCGACGATCTCGACCTGGACGATCCGGTTAGTGCTTCGTGTCATGTGAAA
AGAAAGTCCCTGGGCGATGGAGCCGAGCAGGTGAAGTCGGCGGAGAGATTGAGAATGCTGCACGACAACACGATGATAGA
CACGGCCTTGGATTTGGACAGCTTGGATGGCTCCAGCATGGGCAACAACTCACAGTCGTGCCTGGTGAAGTCGGGCAAAC
CGAATGCCACTTCCGTGACCACAAACGTGGCCATAGTCTAAGCGGTCCTCTTTGTCCTGTACATAAGTGTAGATATTCAT
GTCAAGGGGGAGAGTATTGTTAAGTTTTCCCTACTTTTAACTGAATCGATTTTCATTTACTATGTGTGGTGGGGGGAGGG
GGTGCGGTGATTCGATGGAGAGGGGGGATATAATGAAACGACCTATCAGCAGGCAGATAAAAAATATTACCTTAAAGCGT
TACGCATTTGAAACAGAAAGAGAAATATATCTATGCATATATGTAGATGATAATAACTAAAGCATTTACGGATATATGTA
TGCATATGTATAATACAAATGTGGTGAACAATGTTAACAATTTGAGGGCATTAACAAAGGACAAATTAAAGGAGCAACCA
ATACTATGGAGAAACTGTTTATACAATACACGACGCATACATATAAATGAGTTATAGGTAACATATACATAATGATAAAC
AATATACAATGTACGGTTAGTTATAGTGTATAATTTTTGTATTTAAGTTTTTACAAACAGCAGAAACAGAAAGGGGTTCG
TTTCGCAGTTCAGAGTTTAAAAAACATTTGCGGTGTAGCCAGAAACCGAAGAAACAAAGAAAAGAAAGCCAACTAGAAAT
ATCCTGCAATATACGTGAAGTTGAAATTGTCGAGTCGATGAGAAAATGTTAACAGCATAAGAGTTAAAAGCAACAATGTG
GTGTATTAAATGTTCATAAATCTACCAATAAGTGTATTTTCAAGGTGTAAAATGTTATATGACATCAATTAAAACGAGTT
CGAGATTTCGACAAGCTCCATTGCATGAGAGGGCAAGAAATGTTAAGCGTATGTTATGCGAAACTAACAAAACTACAATT
ATACAAAGAATAAAGATTTATAAAT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      app-RH
      FBtr0301052
      2889
      app-RI
      FBtr0301053
      2867
      app-RJ
      FBtr0301054
      6652
      app-RK
      FBtr0301055
      6630
      app-RL
      FBtr0301056
      4559
      app-RM
      FBtr0301057
      4537
      app-RO
      FBtr0304661
      4422
      app-RR
      FBtr0334102
      4156
      app-RS
      FBtr0334103
      2679
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      app-PT
      FBpp0308957
      693
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      app-PH
      FBpp0290274
      398
      app-PI
      FBpp0290275
      398
      app-PJ
      FBpp0290276
      755
      app-PK
      FBpp0290277
      755
      app-PL
      FBpp0290278
      693
      app-PM
      FBpp0290279
      693
      app-PO
      FBpp0293203
      382
      app-PR
      FBpp0306224
      693
      app-PS
      FBpp0306225
      476
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      app-RT
      Secondary FlyBase IDs
        References (0)