FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Npc1a-RE
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General Information
Symbol
Dmel\Npc1a-RE
Species
D. melanogaster
Annotation Symbol
CG5722-RE
FlyBase ID
FBtr0343608
Feature type
mRNA
Associated gene
Dmel\Npc1a
Evidence Rank
Length (nt)
4211
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 44 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GTCTGATAAGCTGTCAGTGGGAGTGTTTACGTTTTAATTGTATATTTCAGTTAGTTTTCACTCTCTCCTGTTTTGGGACC
GAGGGTTTGTAGCTCCGTAATCGGATTGTTTGTCGAGGGTATATGCTCGCCTATATATATACCTCCACTCGAAAGTGTTA
GCATCAAAATTGCATTGTTAAGATTAGTAGAAAGAAAGATTTTCGTGCGCACCTTAATCATAAAGCCGTGTAATTTAATT
AACTGAAGGAATTAACTAAGATATGCGATTGTGATAGAATGAGTCCAAGATCCCCGCTCAGGATATCTCCATTTGGAGTA
CACATCCTCATCGCTGCTGTGCTCTTTACGCTAATTCAATCATCGAAACAGGACTGCGTTTGGTATGGCGTGTGCAACAC
CAATGACTTTTCGCACAGCCAAAACTGTCCGTACAATGGAACAGCGAAGGAAATGGCAACTGACGGTCTGGAGCTGCTGA
AGAAACGCTGTGGATTTCTGCTGGAGAATAGCGAAAACAAATTTTGCTGCGATAAGAATCAGGTGGAGCTCCTTAATAAG
AATGTGGAGCTGGCCGGAAATATCTTGGATCGATGTCCATCCTGCATGGAGAACTTGGTGCGGCACATCTGCCAATTCAC
CTGTTCACCAAAGCAGGCTGAGTTCATGCATGTGGTGGCCACGCAGAAAAATAAGAAAGGTGATGAGTACATAAGTTCTG
TTGACTTGCATATATCAACGGAATACATCAACAAGACTTATAAATCGTGCTCTCAGGTTTCTGTACCGCAAACGGGTCAA
TTAGCTTTTGATTTAATGTGCGGCGCTTACTCAGCATCTCGCTGCAATCCTACAAAATGGTTCAACTTTATGGGCGATGC
CACCAATCCATATGTTCCTTTTCAAATTACCTATATTCAACATGAGCCCAAATCAAATAGCAATAACTTTACGCCCCTCA
ATGTAACGACCGTTCCTTGCAACCAAGCAGTTAGCAGCAAACTACCTGCGTGCTCCTGCTCGGACTGCGACCTATCCTGT
CCCCAGGGACCGCCGGAACCGCCCCGTCCAGAGCCCTTCAAAATTGTTGGACTCGACGCCTATTTCGTCATCATGGCAGC
TGTCTTCTTGGTGGGAGTCTTAGTATTCTTAATGGGCTCGTTTCTGTTTACACAAGATGACAACTTTCAAGTGGATGGCA
ATGATGTTTCCGATGAAATGCCCTACAGCGAGAATGATTCATACTTTGAAAAACTTGGCGCCCACACAGAAACTTTCCTG
GAAACATTCTTCACCAAATGGGGAACGTACTTTGCTAGCAATCCTGGCTTGACTTTAATTGCCGGAGCATCCCTGGTTGT
TATACTGGGGTATGGCATCAACTTTATAGAAATCACAACGGATCCGGTTAAACTTTGGGCTTCGCCGAACTCAAAATCCA
GACTGGAGAGAGAGTTTTTCGATACGAAGTTTTCGCCATTCTATAGGCTGGAACAGATAATCATCAAAGCTGTGAACTTG
CCACAGATTGTGCACAACACCTCGAACGGCCCATACACCTTCGGTCCCGTCTTCGACAGAGAATTTCTAACAAAAGTGTT
GGATCTGCAGGAGGGCATCAAGGAAATTAACGCAAATGGCACACAGCTGAAGGATATATGCTACGCGCCTTTGTCGGATG
ATGGCAGTGAAATCGATGTGTCCCAGTGCGTTGTCCAATCGATTTGGGGATACTTTGGCGATGATCGAGAAAGATTGGAT
GACCACGACGAGGACAATGGATTCAATGTTACCTATTTGGATGCCTTATACGATTGCATTAGCAATCCCTATTTATGCCT
AGCTCCTTATGGCGGTCCCGTAGATCCAGCCATAGCACTTGGAGGATTCCTGCCACCTGGAGACCAACTGACTGGCAGCA
CGAAATTTGAGTTGGCCAATGCGATCATTCTGACATTCCTGGTCAAGAATCATCATAACAAAACCGATTTGGAAAATGCC
TTAACGTGGGAGAAGAAATTCGTGGAGTTTATGACCAACTATACGAAGAACAATATGTCGCAGTACATGGACATAGCCTT
CACATCGGAGAGATCGATAGAAGACGAGCTCAACAGGGAGTCCCAGTCGGATGTGCTGACTATTTTGGTGTCCTACCTAA
TTATGTTCATGTACATAGCGATTTCGCTTGGCCATGTCAAGGAGTTCAAGCGAGTGTTTATCGACAGTAAGATAACGCTT
GGCATAGGCGGTGTCATCATTGTTTTGGCCTCGGTAGTGTCGTCCGTTGGCGTTTTCGGTTACATCGGTTTGCCGGCCAC
CCTGATCATTGTCGAGGTCATACCGTTTTTAGTATTAGCTGTCGGAGTGGATAACATTTTTATTCTGGTCCAAACTCATC
AGCGCGATCAACGCAAACCCAATGAAACGCTTGAGCAGCAAGTTGGTCGAATACTCGGCAAGGTTGGACCCAGTATGCTG
CTCACCTCGTTGAGTGAAAGCTTTTGCTTCTTTCTCGGTGGCCTTTCTGATATGCCAGCCGTAAGGGCTTTTGCCCTATA
CGCCGGCGTAGCCCTCATCATTGATTTTCTATTGCAAATAACCTGTTTCGTTAGCCTATTTACGTTGGATACGAAGCGCA
GGGAGGAGAATCGTATGGACATTTGTTGTTTCATCAAGGGCAAGAAGCCGGATAGTATAACTAGTAATGAGGGACTCTTG
TACAAATTTTTCAGTAGTGTTTACGTCCCATTTCTGATGAAGAAAATTGTGCGCGCCAGTGTGATGGTCATCTTTTTTGC
CTGGCTGTGCTTCAGCATTGCCATTGCGCCACGAATCGACATTGGGCTGGATCAAGAGTTGGCTATGCCGCAGGATAGTT
TCGTCTTGCACTATTTCCAATCGTTGAACGAGAATCTCAACATTGGTCCACCAGTGTACTTTGTGCTGAAGGGCGATCTA
GCCTATACGAATAGTTCGGATCAGAATTTGGTGTGTGCAGGTCAATATTGCAACGATGACAGCGTACTCACGCAGATCTA
CTTAGCCAGTAGGCACTCTAACCAAACGTATATCGCGCGTCCAGCATCCAGTTGGATCGATGACTACTTCGATTGGGCGG
CAGCAGCATCATCCTGTTGCAAATATAGAAAGGATAGCGGCGACTTTTGTCCGCATCAGGATACTTCCTGTTTGAGGTGT
AATATCACGAAGAATTCACTTCTTAGGCCGGAGGAAAAGGAGTTTGTTAAGTATTTGCCATTTTTCCTGAAGGACAATCC
CGATGACACGTGCGCCAAGGCCGGTCATGCCGCCTATGGCGGAGCTGTTCGGTATTCCAACAGCCATGAAAGACTGAACA
TCGAGGCGTCGTATTTTATGGCATACCACACCATACTTAAGTCCTCGGCCGACTACTTTCTGGCCCTAGAGTCGGCTAGA
AAGATATCCGCGAATATTACGCAAATGTTGCAGGGCAGACTAATGTCAAATGGAGTTCCTATGGCATCGGCCCTTACGGT
CGAAGTGTTTCCATATTCAGTATTCTATGTGTTTTACGAACAATATCTGACCATGTGGTCGGATACGCTACAGAGCATGG
GTATTTCAGTTCTTTCCATATTCGTTGTTACATTTGTTTTGATGGGCTTCGATGTTCATTCCGCATTAGTTGTTGTCATA
ACGATAACTATGATTGTTGTTAATTTAGGTGGCCTTATGTATTATTGGAACATTTCGTTGAATGCTGTTTCGTTGGTGAA
TCTCGTCATGGCCGTCGGCATATCCGTGGAATTTTGTTCGCACTTGGTGCACAGCTTCGCCACATCGAAATCAGTTAGTC
AAATTGATCGAGCTGCAGATAGCCTTTCCAAAATGGGTAGCTCCATTTTCTCCGGAATCACTTTAACCAAATTTGCGGGC
ATACTAGTGTTAGCCTTTGCAAAAAGTCAGATATTCCAGGTGTTTTATTTCCGTATGTACTTGGGAATCGTTGTAATTGG
GGCGGCGCACGGGTTGATCTTTCTGCCCGTTCTATTAAGTTATATTGGGGCTCCTGTAAGTAATGCTAGATTAAGGTATC
ATAGCCAGGCGGCTGCTGAGCACGAGACAGCACTAGCGGGAATACTATAAATCAATCCCATAGTTGTATTGTAATAATCT
CAAAAAATATTTTAAATGTTAACTGGTTAAGGTAATAAATAATAACAAATG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Npc1a-RA
        FBtr0079957
        4223
        Npc1a-RB
        FBtr0303905
        4119
        Npc1a-RC
        FBtr0303906
        4081
        Npc1a-RD
        FBtr0303907
        4127
        Npc1a-RF
        FBtr0343609
        4032
        Npc1a-RG
        FBtr0343610
        5025
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Npc1a-PE
        FBpp0310203
        1283
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Npc1a-PA
        FBpp0079547
        1287
        Npc1a-PB
        FBpp0292908
        1287
        Npc1a-PC
        FBpp0292909
        1287
        Npc1a-PD
        FBpp0292910
        1287
        Npc1a-PF
        FBpp0310204
        1283
        Npc1a-PG
        FBpp0310205
        1283
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Npc1a-RE
        Secondary FlyBase IDs
          References (0)