FB2026_03 , released September 17, 2026
Transcript: Dmel\Npc1a-RA
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General Information
Symbol
Dmel\Npc1a-RA
Species
D. melanogaster
Annotation Symbol
CG5722-RA
FlyBase ID
FBtr0079957
Feature type
mRNA
Associated gene
Dmel\Npc1a
Evidence Rank
Length (nt)
4223
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 54 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      GTCTGATAAGCTGTCAGTGGGAGTGTTTACGTTTTAATTGTATATTTCAGTTAGTTTTCACTCTCTCCTGTTTTGGGACC
GAGGGTTTGTAGCTCCGTAATCGGATTGTTTGTCGAGGGTATATGCTCGCCTATATATATACCTCCACTCGAAAGTGTTA
GCATCAAAATTGCATTGTTAAGATTAGTAGAAAGAAAGATTTTCGTGCGCACCTTAATCATAAAGCCGTGTAATTTAATT
AACTGAAGGAATTAACTAAGATATGCGATTGTGATAGAATGAGTCCAAGATCCCCGCTCAGGATATCTCCATTTGGAGTA
CACATCCTCATCGCTGCTGTGCTCTTTACGCTAATTCAATCATCGAAACAGGACTGCGTTTGGTATGGCGTGTGCAACAC
CAATGACTTTTCGCACAGCCAAAACTGTCCGTACAATGGAACAGCGAAGGAAATGGCAACTGACGGTCTGGAGCTGCTGA
AGAAACGCTGTGGATTTCTGCTGGAGAATAGCGAAAACAAATTTTGCTGCGATAAGAATCAGGTGGAGCTCCTTAATAAG
AATGTGGAGCTGGCCGGAAATATCTTGGATCGATGTCCATCCTGCATGGAGAACTTGGTGCGGCACATCTGCCAATTCAC
CTGTTCACCAAAGCAGGCTGAGTTCATGCATGTGGTGGCCACGCAGAAAAATAAGAAAGGTGATGAGTACATAAGTTCTG
TTGACTTGCATATATCAACGGAATACATCAACAAGACTTATAAATCGTGCTCTCAGGTTTCTGTACCGCAAACGGGTCAA
TTAGCTTTTGATTTAATGTGCGGCGCTTACTCAGCATCTCGCTGCAATCCTACAAAATGGTTCAACTTTATGGGCGATGC
CACCAATCCATATGTTCCTTTTCAAATTACCTATATTCAACATGAGCCCAAATCAAATAGCAATAACTTTACGCCCCTCA
ATGTAACGACCGTTCCTTGCAACCAAGCAGTTAGCAGCAAACTACCTGCGTGCTCCTGCTCGGACTGCGACCTATCCTGT
CCCCAGGGACCGCCGGAACCGCCCCGTCCAGAGCCCTTCAAAATTGTTGGACTCGACGCCTATTTCGTCATCATGGCAGC
TGTCTTCTTGGTGGGAGTCTTAGTATTCTTAATGGGCTCGTTTCTGTTTACACAAGGTTCGTCCATGGATGACAACTTTC
AAGTGGATGGCAATGATGTTTCCGATGAAATGCCCTACAGCGAGAATGATTCATACTTTGAAAAACTTGGCGCCCACACA
GAAACTTTCCTGGAAACATTCTTCACCAAATGGGGAACGTACTTTGCTAGCAATCCTGGCTTGACTTTAATTGCCGGAGC
ATCCCTGGTTGTTATACTGGGGTATGGCATCAACTTTATAGAAATCACAACGGATCCGGTTAAACTTTGGGCTTCGCCGA
ACTCAAAATCCAGACTGGAGAGAGAGTTTTTCGATACGAAGTTTTCGCCATTCTATAGGCTGGAACAGATAATCATCAAA
GCTGTGAACTTGCCACAGATTGTGCACAACACCTCGAACGGCCCATACACCTTCGGTCCCGTCTTCGACAGAGAATTTCT
AACAAAAGTGTTGGATCTGCAGGAGGGCATCAAGGAAATTAACGCAAATGGCACACAGCTGAAGGATATATGCTACGCGC
CTTTGTCGGATGATGGCAGTGAAATCGATGTGTCCCAGTGCGTTGTCCAATCGATTTGGGGATACTTTGGCGATGATCGA
GAAAGATTGGATGACCACGACGAGGACAATGGATTCAATGTTACCTATTTGGATGCCTTATACGATTGCATTAGCAATCC
CTATTTATGCCTAGCTCCTTATGGCGGTCCCGTAGATCCAGCCATAGCACTTGGAGGATTCCTGCCACCTGGAGACCAAC
TGACTGGCAGCACGAAATTTGAGTTGGCCAATGCGATCATTCTGACATTCCTGGTCAAGAATCATCATAACAAAACCGAT
TTGGAAAATGCCTTAACGTGGGAGAAGAAATTCGTGGAGTTTATGACCAACTATACGAAGAACAATATGTCGCAGTACAT
GGACATAGCCTTCACATCGGAGAGATCGATAGAAGACGAGCTCAACAGGGAGTCCCAGTCGGATGTGCTGACTATTTTGG
TGTCCTACCTAATTATGTTCATGTACATAGCGATTTCGCTTGGCCATGTCAAGGAGTTCAAGCGAGTGTTTATCGACAGT
AAGATAACGCTTGGCATAGGCGGTGTCATCATTGTTTTGGCCTCGGTAGTGTCGTCCGTTGGCGTTTTCGGTTACATCGG
TTTGCCGGCCACCCTGATCATTGTCGAGGTCATACCGTTTTTAGTATTAGCTGTCGGAGTGGATAACATTTTTATTCTGG
TCCAAACTCATCAGCGCGATCAACGCAAACCCAATGAAACGCTTGAGCAGCAAGTTGGTCGAATACTCGGCAAGGTTGGA
CCCAGTATGCTGCTCACCTCGTTGAGTGAAAGCTTTTGCTTCTTTCTCGGTGGCCTTTCTGATATGCCAGCCGTAAGGGC
TTTTGCCCTATACGCCGGCGTAGCCCTCATCATTGATTTTCTATTGCAAATAACCTGTTTCGTTAGCCTATTTACGTTGG
ATACGAAGCGCAGGGAGGAGAATCGTATGGACATTTGTTGTTTCATCAAGGGCAAGAAGCCGGATAGTATAACTAGTAAT
GAGGGACTCTTGTACAAATTTTTCAGTAGTGTTTACGTCCCATTTCTGATGAAGAAAATTGTGCGCGCCAGTGTGATGGT
CATCTTTTTTGCCTGGCTGTGCTTCAGCATTGCCATTGCGCCACGAATCGACATTGGGCTGGATCAAGAGTTGGCTATGC
CGCAGGATAGTTTCGTCTTGCACTATTTCCAATCGTTGAACGAGAATCTCAACATTGGTCCACCAGTGTACTTTGTGCTG
AAGGGCGATCTAGCCTATACGAATAGTTCGGATCAGAATTTGGTGTGTGCAGGTCAATATTGCAACGATGACAGCGTACT
CACGCAGATCTACTTAGCCAGTAGGCACTCTAACCAAACGTATATCGCGCGTCCAGCATCCAGTTGGATCGATGACTACT
TCGATTGGGCGGCAGCAGCATCATCCTGTTGCAAATATAGAAAGGATAGCGGCGACTTTTGTCCGCATCAGGATACTTCC
TGTTTGAGGTGTAATATCACGAAGAATTCACTTCTTAGGCCGGAGGAAAAGGAGTTTGTTAAGTATTTGCCATTTTTCCT
GAAGGACAATCCCGATGACACGTGCGCCAAGGCCGGTCATGCCGCCTATGGCGGAGCTGTTCGGTATTCCAACAGCCATG
AAAGACTGAACATCGAGGCGTCGTATTTTATGGCATACCACACCATACTTAAGTCCTCGGCCGACTACTTTCTGGCCCTA
GAGTCGGCTAGAAAGATATCCGCGAATATTACGCAAATGTTGCAGGGCAGACTAATGTCAAATGGAGTTCCTATGGCATC
GGCCCTTACGGTCGAAGTGTTTCCATATTCAGTATTCTATGTGTTTTACGAACAATATCTGACCATGTGGTCGGATACGC
TACAGAGCATGGGTATTTCAGTTCTTTCCATATTCGTTGTTACATTTGTTTTGATGGGCTTCGATGTTCATTCCGCATTA
GTTGTTGTCATAACGATAACTATGATTGTTGTTAATTTAGGTGGCCTTATGTATTATTGGAACATTTCGTTGAATGCTGT
TTCGTTGGTGAATCTCGTCATGGCCGTCGGCATATCCGTGGAATTTTGTTCGCACTTGGTGCACAGCTTCGCCACATCGA
AATCAGTTAGTCAAATTGATCGAGCTGCAGATAGCCTTTCCAAAATGGGTAGCTCCATTTTCTCCGGAATCACTTTAACC
AAATTTGCGGGCATACTAGTGTTAGCCTTTGCAAAAAGTCAGATATTCCAGGTGTTTTATTTCCGTATGTACTTGGGAAT
CGTTGTAATTGGGGCGGCGCACGGGTTGATCTTTCTGCCCGTTCTATTAAGTTATATTGGGGCTCCTGTAAGTAATGCTA
GATTAAGGTATCATAGCCAGGCGGCTGCTGAGCACGAGACAGCACTAGCGGGAATACTATAAATCAATCCCATAGTTGTA
TTGTAATAATCTCAAAAAATATTTTAAATGTTAACTGGTTAAGGTAATAAATAATAACAAATG
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Npc1a-RB
      FBtr0303905
      4119
      Npc1a-RC
      FBtr0303906
      4081
      Npc1a-RD
      FBtr0303907
      4127
      Npc1a-RE
      FBtr0343608
      4211
      Npc1a-RF
      FBtr0343609
      4032
      Npc1a-RG
      FBtr0343610
      5025
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Npc1a-PA
      FBpp0079547
      1287
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Npc1a-PB
      FBpp0292908
      1287
      Npc1a-PC
      FBpp0292909
      1287
      Npc1a-PD
      FBpp0292910
      1287
      Npc1a-PE
      FBpp0310203
      1283
      Npc1a-PF
      FBpp0310204
      1283
      Npc1a-PG
      FBpp0310205
      1283
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (3)
      Reported As
      Symbol Synonym
      CG5722-RA
      (FlyBase, 1996-)
      NPC1-RA
      (FlyBase, 1996-)
      Npc1a-RA
      Secondary FlyBase IDs
        References (2)