FB2026_02 , released June 18, 2026
Transcript: Dmel\CkIIα-RE
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General Information
Symbol
Dmel\CkIIα-RE
Species
D. melanogaster
Annotation Symbol
CG17520-RE
FlyBase ID
FBtr0344974
Feature type
mRNA
Associated gene
Dmel\CkIIα
Evidence Rank
Length (nt)
2053
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 29 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTTATCGAAATTTCTCGGAATAGGAGCAAAATTGAAAACAAAAGAATTCCTTGACAGTGTCAAATCTATGCAAACTTGG
TTTCAGTTGTTTTTCTTGTTCATTGTCAATAGTTTTGTTATTTTTTTTTCACATATTGATAAAAAACATATAAATAAATA
GTTATCAATAAAAATAAATTCATGCCTTTTAATAAAAGGCCTTTATATTTTTGCATTGAAAGTCAAATATACAATTTATT
TTCATTGTGCAAACAATTTCTTGACAAACTGTATGTACATTTTCTTTCACTGAAGTAATATTTTTGATCGCCATAGTAAA
AAGGACACGAAGAATTTAAACTAACCGTACTCACAATAAGAAAATGACGAAAACAATAGAAGCAGACAGAGAAGGGCGAA
AAGAAAAAGAAGCACTTAGTAATACTTATTTCCTTTGATACCTTCCGTACTTCCGACTGGGATTTTCAAGCTTACCGTTA
TCTGAACAGAAGAACAACGGAAAAACTATCTTGGTATAATCTGCAAAGTAAAACAAAATGCAGAACAAAATAAGTTTAAA
ATTACTGCAGATCAGTCAAAGTTCAGCAACGATGGCACGTGTGCAAAACTGTGAGGAACATACCCGGCATACACTGTGGA
TATCATACGAGACGGAGAAATCTTTTAAAATACTTTGGCAAGCCAGCTTATAACAATCAATCTTCAAAAATTGGATTGTT
GTACAATAATAATATTGTTAGGACCACCAACCGACTGAGAACGGAATCAGCTCACATAAACTTACTGCTACAACCCGAAA
AAAATTTTAACAAGGAGGCAGAAAGGAACGTTTTGTTGAGAAAAATGACACTTCCTAGTGCGGCTCGCGTGTACACAGAT
GTCAATGCGCACAAACCGGATGAATATTGGGACTATGAAAATTATGTGGTTGATTGGGGCAATCAAGACGATTATCAGTT
GGTCCGTAAATTAGGCCGTGGAAAGTATTCTGAGGTCTTCGAGGCCATTAATATTACGACCACGGAAAAGTGCGTTGTTA
AAATTCTGAAACCTGTTAAAAAAAAGAAGATAAAGCGTGAAATCAAAATTTTGGAGAACTTGCGTGGAGGAACTAATATA
ATAACACTTTTAGCCGTTGTCAAGGACCCAGTTTCTCGAACACCAGCGTTGATTTTTGAGCACGTCAACAACACAGATTT
CAAGCAACTTTACCAAACATTAACTGATTATGAGATTCGTTACTACTTGTTTGAGCTTCTTAAGGCACTTGACTACTGCC
ACAGCATGGGAATAATGCATCGTGATGTAAAGCCCCACAATGTTATGATAGATCACGAAAATCGAAAATTGCGCCTTATA
GATTGGGGACTTGCCGAATTTTACCATCCTGGTCAAGAATATAATGTTCGTGTGGCTTCGAGATACTTTAAAGGTCCCGA
ATTACTGGTAGATTACCAGATGTATGATTACTCACTGGATATGTGGTCACTAGGTTGTATGTTGGCGTCGATGATATTCC
GAAAAGAGCCATTTTTCCACGGACATGATAACTATGATCAATTGGTACGCATTGCCAAGGTGCTGGGCACCGAAGAACTC
TACGCATATTTGGATAAATACAATATTGACCTCGATCCAAGATTTCACGACATTCTACAGCGTCACTCACGAAAGCGATG
GGAAAGATTTGTCCATTCTGACAACCAACATCTAGTTTCTCCTGAAGCACTAGACTTTCTTGATAAACTTTTACGCTATG
ATCACGTTGATCGACTCACAGCTCGCGAAGCAATGGCCCATCCATATTTCTTACCTATTGTCAATGGTCAAATGAATCCC
AATAATCAGCAATAAGAAGTTTTTTCATTTTGATGAATACTGTAATTCGAGTTTGGGATAGAAGCCATTTAACAATATGA
TAATTATGCAAAAAAAAAATATAAAATCCGAAGAAAAATAAAATAACTTAAGCTACTGTCTTAAAAATGACTTCAACTGT
TCGTTAAGGGATTAAACAGAGAAATCGAATAAATTCCTCACAGTATAACATCT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        CkIIα-RA
        FBtr0070042
        1536
        CkIIα-RB
        FBtr0070043
        1561
        CkIIα-RC
        FBtr0070044
        1423
        CkIIα-RD
        FBtr0111141
        1581
        CkIIα-RF
        FBtr0345138
        1481
        CkIIα-RG
        FBtr0345139
        1429
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        CkIIα-PE
        FBpp0311229
        336
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        CkIIα-PA
        FBpp0070041
        336
        CkIIα-PB
        FBpp0070042
        336
        CkIIα-PC
        FBpp0070043
        336
        CkIIα-PD
        FBpp0110433
        336
        CkIIα-PF
        FBpp0311359
        336
        CkIIα-PG
        FBpp0311360
        336
        Comments

        Transcript postulated to overlap transposable element: TSS within annotated TE; this isoform may be specific to sequenced strain.

        Transcript terminates at site supported by polyadenylated cDNA.

        Transcriptional initiation is supported by RAMPAGE CAGE data (FBrf0220331).

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CkIIα-RE
        Secondary FlyBase IDs
          References (0)