FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Hr3-RI
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General Information
Symbol
Dmel\Hr3-RI
Species
D. melanogaster
Annotation Symbol
CG33183-RI
FlyBase ID
FBtr0452140
Feature type
mRNA
Associated gene
Dmel\Hr3
Evidence Rank
Length (nt)
7925
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 65 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        ACTCGAATTTGGGACACATTCCTGTAAAGGACGCAGCTCCGGTCAGCTGCTTCGCAAAATCGACAAAAAGGAGTCACAAA
AAAACGCGCGCGGTGCATTTAGCCACAAATCTCTGAAAGTGAAAATACAAATATTGAAACAGTGAAATCCACAAACCAGC
CAAAAGTGAAACAAAATTGAACACAGTGCTTAATTAATATCGAAGCTAAAGGGATAGAAATCCGATTAGGAAAAGGGAAA
GCTGCAGCGCTGCTCCTGTTTGCCAAATATTGATTCGCAAGTGTGCCGCTGAAAAATCGATTATTAAAGCCACTTTCCAC
ACAGCTGGTGGTTGTTGTTGCCGTGAGGATGGAGGTGGTGCTTGGGGTGGTGGTTGCATAGGGTTGCGTGCCGCGATGTG
GGAAATCAACAGCAACATTGGCACATCCACATCCAGATCCAGAGGCACACTTCCAACTGTTTTGACGTGGTCGGGTTCCA
ATGGCGCTGACACTACCGAATGCTGCAGCGCAGCCTTGCAGCCATCCAGCGGCGACGCGTTGCATGTGCAGCAGCAACAG
CAACAGCAGCAGCAACATCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAACAACAGCAGCAGCAGCAGGATACGAA
AACGAGGATGACAACGACCACAGGCAAACGCGGAGGACACAGATACAGAAGCAGGCTCAGTCACCGAAGCACAGCAACAA
TTGCTGCATATTAGGCAGTAAAGTAAAGTTAAACACAACCCAAAACCGAAAAGACTAGCCCAAAATTTACTCAAAAACCA
ACACAAGTGGAAAGCATTAATCGGAATGTCGAACTCTATGCATCGCACAAAGTTACGTTAAGTATACGACGCGTATTTCC
AGCTGCAAAACGAACCAAAAACGAACCGAACGAAACGAAACGCACAGGTGCATCTGCAGACCCCACTACGCCCCTAAAAG
CCCACTCCCCCCCCTTTTCGAACCCTCAGCCCCTCATTAGGCCACCCCCTCTGGGGTATCTACACCAATTGACAAGCAAT
CGAGGCAATGCAGTATGAATGAACTTGTTTAGTCGACAATTTTTTAAGTGCACTTTCGTAAGGCTGATTTTCAATTTATT
TCGATGTTGTGCTTCTACACCCAAAAAAAAAACCAAATATAACAAGTAACAAATACAAGCATAAAAGAACCCAAGAAATT
CAAGCAATGAACCAAGTGAAAGTGTGAGTGTTTAGTGTTTTAAGCGAAGGCGAAATCCGGACATTTGAGAGCCTTTGTGA
GTAAACGGCCGCCACAACGGATAGGCCCAGAGATCTCCTGCTGATACAGCAGGCCAAGCCCGCCGGCGGCAGCAAATCCT
CCAGCGGTGGTCCAACGTATATCGGCACCGATGCCGCCACAGCAGCGGCGGTGGCCAATCTGCGCAGCAAGGTGCCCTCC
ATCTCAATAATCCCGCTGCCCGTCTCGACCACCATTGTGGCACGCAGTGGTAGCGGTGCCTCTGGCACTGGCGGCAGTGG
AGGAGCACCGCCAGCACTGCCCCAGCTGATCCAGTCGTCGCGGAGTGTGTCCACCAAATCCACGGGCACGTCTCCACCAT
TGGCCTTTATAACGGAAGGTTCTGGAACATCGGGTGCTCCCGCCCTGACACTGCTGCCACGACCCCAGCAGCAGCACCAG
TACCAGCAGACCGACAAGTGCACGGTCCTCAAACTGGACGTACTGAAGCAGCAGTCGGGTGTGGCAGCCAACTCCAGCAG
TAATACCTACCTGCAGATCGAGCAGCAGCTCAGCGAACTGGAGGCCGCCGACGAGGAGGAGGAGAACATGGCCAGTTTGC
TGGGCAGTGCGCCACCCGCCCAAATCCTGGCCAACCAGCCCATCATCGTCAAGATCGAGCCCACGCAATCCTTCCACATC
GTGGACGAGGGCGACACGAGAGTACTGAGCTTGCCCCTCAGCGATGCTGATAAGCTGGGCGCCAGTTGGATAGATCTCAA
GGATATTGCCGGCCTACAGGCCGGTGGCGGAGCCACCTTGCTGGACGTCTGCTTCGAGCAGGCCAACGAGGACGGCACCA
TCATAGCCACCGTGCAGCCGGACTTGGAAAACGAGCTCGAGGCTGAGCTAAAGGCGGAGGGCGAGCCCGAGGATGAGACT
GAACCAGAGCCTCCGGCGCCCAAGAGATTGGCGACCACCAGGCCAGCACAGTCGCGGCCACAACAGCAGCAGCAACAGCA
GCAGCAGCAGGTGAAATTCCTATCGGATCCACCGGCATTGGCACGCTCCAGCAGCTTCAGCAGTCTCAGCAGCTTTAGCA
GCATCAGCAATATCAGTTCCGTGTGCAAGAACATGGCCAGCAATACCAGCCAGGAGGGCTCCCTAAAACGCACAAAGGAG
CGAACTCCTCCACCAATGCCACCGCTCACGACTCACAAGCCCGCTGCCACAACAACAGCAACATCAGCAACATCTGCAGC
CGCAGCAACATCAGCAGCAACAGCAAGTGCAACAGCAACATCGGCCAGAGAAAACAGCAGAGAGCACAGCAGCAGCAGCA
GCGGCAGTAATGGAGCCATGACAGCTCAAATTGAGATAATTCCATGCAAAGTCTGCGGCGACAAGTCATCCGGCGTGCAT
TACGGAGTGATCACCTGCGAGGGCTGCAAGGGATTCTTTCGAAGATCGCAGAGCTCCGTGGTCAACTACCAGTGTCCGCG
CAACAAGCAATGTGTGGTGGACCGTGTTAATCGCAACCGATGTCAATATTGTAGACTGCAAAAGTGCCTAAAACTGGGAA
TGAGCCGTGATGCTGTAAAGTTCGGCAGGATGTCCAAGAAGCAGCGCGAGAAGGTCGAGGACGAGGTACGCTTCCATCGG
GCCCAGATGCGGGCACAAAGCGACGCGGCACCGGATAGCTCCGTATACGACACACAGACGCCCTCGAGCAGCGACCAGCT
GCATCACAACAATTACAACAGCGGCGGCTACTCCAACAACGAGGTGGGCTACGGCAGTCCCTACGGATACTCGGCCTCCG
TGACGCCACAGCAGACCATGCAGTACGACATCTCGGCGGACTACGTGGACAGCACCACCTACGAGCCGCGCAGTACAATA
ATCGATCCCGAATTTATTAGTCACGCGGATGGCGATATCAACGATGTGCTGATCAAGACGCTGGCGGAGGCGCATGCCAA
CACAAATACCAAACTGGAAGCTGTGCACGACATGTTCCGAAAGCAGCCGGATGTGTCGCGCATTCTCTACTACAAGAATC
TGGGCCAAGAGGAACTCTGGCTGGACTGCGCCGAGAAGCTTACACAAATGATACAGAACATAATCGAATTTGCTAAGCTC
ATACCGGGATTCATGCGCCTAAGTCAGGACGATCAGATATTACTGCTGAAGACGGGCTCCTTTGAGCTGGCGATTGTTCG
CATGTCCAGACTGCTTGATCTCTCACAGAACGCGGTTCTCTACGGCGACGTGATGCTGCCCCAGGAGGCGTTCTACACAT
CCGACTCGGAAGAGATGCGTCTGGTGTCGCGCATCTTCCAAACGGCCAAGTCGATAGCCGAACTCAAACTGACTGAAACC
GAACTGGCGCTGTATCAGAGCTTAGTGCTGCTCTGGCCAGAACGCAATGGAGTGCGTGGTAATACGGAAATACAGAGGCT
TTTCAATCTGAGCATGAATGCGATCCGGCAGGAGCTGGAAACGAATCATGCGCCGCTCAAGGGCGATGTCACCGTGCTGG
ACACACTGCTGAACAATATACCCAATTTCCGCGATATTTCCATCTTGCACATGGAATCGCTGAGCAAGTTCAAGCTGCAG
CACCCGAATGTCGTTTTTCCGGCGCTGTACAAGGAGCTGTTCTCGATAGATTCGCAGCAGGACCTGACATAACAAGAGCA
GCAGCCGTTCCTGGAGACGACCGCGGACGATGTTGCCGAGGATGCGGCTGCCGCCGGATGTGTCCTGCCGCCGGTGGCGC
CCCCTGCCGGGCAGCAACCAGCGCTGCTCGAGGACTGAGGGCCGCAGGATGTGGCAACAATAATTATTTGAGTAAACACT
GCACTGCGCATGCAGCAGATACAAGAACTTTATCATGATTTAAGCTAGCATACAACCAAGGATGTGATCCTCGCCAAGGA
CTCACTTAAAAAGAACTCTATCTATATACATATATATATTATATATGACAGAGCGGATGACGCAAAGGGAAGGGAAAATA
TTTCAAAAATATTGTTAACTCAGTTAAGACTTTTGCTTCGTAGAGAACCGAAACCGAAACCGATTGCATTTCGAGCAAGG
GGCATCAAACTGATTTTCGAGGTTATACTATACATATATACACACAAACACACACACACACATATATATATATGTAACTT
CCAAACTTTCATATCCTGGCCCGAGCAGATCAGATCGTCTAAGTACTTAAAACCAAGCGAAATTCTCTACACCGCACAAC
CCAGGACCCGTAGACCCCAATAATTCAGTTCGGTTAGTGTTAACCCCAGAAAGCCCGATTCCGATCCCGCCTAGGTTGTC
TTTGCCTTACGTTGTAACTAAAGTATGTGTATTATATATACAGCAAATGTATGTATAACTATGTCGTATCGGTTATATGC
CTAACAACATTATTTTTTGTAAACAACAAAATCGAATATCTCGGAAAATGTGTTCTTATAATTATATTGATTAATGCAAT
TACAATATATTTACAATTTACCGTTACGTTTTTACATTATACATAAGACGCAAGAGAAGGAAACGGAAGTTTAAGGATTA
GAAAGCTGAATAAGAAAAGGCTTAAGGACGAGCTGAGTAGCAGTTAAAGTGAGCGAGAAATCGAATGAATACCAGAAAAT
TTCAAGCAAGCACATAAAAGTATGCAATATTTTGTTTAAAAACAACTTTTTATTAGTTTCTTAAATATAACATAATTACG
TACATACACACACGTATATATAGGGCTATATATATCTATATATATATATATATACATGATAGACAAATCCCAATCCGGTT
CCAAGGTTTAGTAAAAATAAAGAGAAATAAAACGAAAAACAAAAACTTTTGATATGAAATCCTACGCATAATTAACAACT
TTTATTGTTTCTAAGACTTAAACTTAATTAAAATGGAAACCAAAACAGACTGACGGACCGACCCCGACAGCATGCCACGC
CCTCCCCCGCCCCACCCTCCACAGATCCTGGCAGAAATTTCAAAGGAGTTTGATACACAAATCGAGAAAAGAAATTTTCA
AAAAAATAATATAAAGACAAGCAAACGGCGACTTTTTTGGTTGATACATTTGAAAAGAATATACAATTAAATATCTGACT
GACTATACAAAGACGTTACACACACGCATACACATACACACACATACACGCATACACACACAGCTTACGATACATAAATT
AGTTAAACTTAGAGTAAACAAACAACAACAAACACATTGGATAGTAGGTGATAATTGGTGTGTCTTAAATAAACCTTAAC
CCCTCCCCGACCCCCGCCCACTTGCTTAATACCCAACGCCCCAAAAAGCCCCACATTTCTACTAAATGAAAAGCTTAATC
AAAACTTTTTTGAAATTATTCAAGTGAAAATTTCAGCAGGCAGGCATAAATATTAATTAACATTAATTATAGCAAGGAAA
CTTATAAATAAAATGTATACAACAAAACTACAAAAATTAAATAAATTACATTTTGCAAATTCCACAAAAAATAAAACATG
ATTTTGCAAATTCACTTAAAATCCTTTCCCTGAATCCAAGCAAAAATATTTACACTAGCTTACATAGAACTGGGACGAGG
ACATGAATATTTCAATTGAGAAAAAAATCTATGTTAATGTAATCGATCGATTTGGACATATTTAAGTTCGACATTTTTGG
CCTTACAAAACAAAAAACAAAAAGAAGAAACCTAAAGTACTTTATATATATACAAACCATATATACAATATAGAGAATAC
AAAACTAGTTTTAATTTATACAAAGCAAGGGAGCAGCTTTCAAACTCAAAACAAAAATATCCCCGAAAAAAACAACAACT
TTGTTAAAAACTGCGCATAATAAAGAAAATAATAAACAAAGTTAATCTATAATATAAATTGAAGTTAAGTTGATTTGAGC
GGTCGACAACAAGAACATAAATGTATCTTTAAATGATATATGTATTGTTAAATTTGTATGCTAAGTTTTTAGAAAGGTTA
CATTTTTAAAGAATAATAACAAAAGATCGCGAACTCGACAAGGTGTAAAATGAGTACATTTAAATTAAAATTTAGCATAT
ATAATGCATAAATATTATGTTACGATATTTACATTTATATAAAACAAAACAAAAACACTAAAGAAAACCGAAAAAACAGA
AGTCCCATATTAAAAATGAAATAAAATGAGCAGAACCTATAAACTGATAAGGGAATTCTGAATATTAAAAAAAAAAAGAA
AACAGAAACCGAAAAAGGTAAACAATTAATTATACAAAACCAAAAACTTATAAAGAATGAAAGGCAAATTATATATATTA
TATATATGATTAAGTAGCATTAGGCCGACTGTTGCACATAAACACACACCTCACACCCACACCTACACTCAGACAAACTC
ACACTTGCTAATAGGAAAAGCTACGATTGAAAGCTGCGAAAAGGATCAAGTGCAAAAAGGAGCTTTCATAAACACATTTA
TTGCATTAAGTCATTCATTTATTCGGTGGGAAAAAAGCAATAAGAAATAGCAACTGACAAGAGTACAGTGGATACTCGCT
TGAATGGATCATAATTTTCAAATTTTAATTTAATATGTAAATTGAAAAGTTTGACTGAACTTATTCCGAATAGCAAGGGT
TTGTAGATAATAACTTTCAAACATCAAGTGCAACCATTTCTATAAACGACTTAGATTTATTTGAAATATTTCCGATTTTA
TACAAAAAACGTACTCTTCACCTAATAACCACTGTACTGTCTGTATGTTTCGTACTCCTTTCATCTCCCCTTTGAATTTC
CTGACCGACAAACGTGGCGTATGAGTAATATAACTGGTCCGCAAACTTTGTTATTTATATATTTCAGCGAGCTAGACTCC
GAGCATGTTTAATTTCAAACAAAACTATTCAGTTTTTTAATGCCAGGGCACGAACATAAATAAAACCGAAATGAACAGAT
AAACCGATATATTATTTGTGTATGTGGATCGGTTGTAAACAAATAAAGGCGGAGGCACACGAATGTTGCATAAATCGAAA
ATAAAAAAAACACAAAAACAGACTAGGCATCAGCTATCGAACAGGAATAAGCGATATTTTACCACGTGCATAAAATGGAG
AGGAAATCATTTTTTATAAACTATCACACATTCACAAAACACAACACACAACACTCACACACGCATGTAGCTTTAGTTTA
CTAGGTGAATTCGTTTTTATATATTTGTAAATTGTTTTTAGGTAAATTGAATTATATATACACAGACATTTAAAGACATA
TATATATATATATATATGAATCTCGATACATATACACGCATATATATGGAACAGATTATATATATTATGTCATACTTCAT
TATGATTATTACGATTATTATGATTCAACACAGAAACCAGAAAAAGGCAAGCATCTAATGGTGAAACCAACCAACAAAAT
TAACCGAGAACAAAGTGCTGGAAAAGCCGTTCAAGCCGCAGTTGAAGATGCAGAGATGCGGAAAAGAGCAGAAATAATTC
AATTCATTCTTAACAATAAAATGTAATCTGAATTATACAAAACAAAACAAAAAAAAAACAACAACAACAGCAAACCGAAA
AAGAAAACAAAAGAAAATCATAAAGAAAACATTTTCAAAAGCTTTTACTTACTTGGAAATTGAGATGGGTTGCGAATCAG
GGGCG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Hr3-RA
        FBtr0088368
        6071
        Hr3-RC
        FBtr0088366
        6466
        Hr3-RD
        FBtr0112799
        4233
        Hr3-RF
        FBtr0306345
        7524
        Hr3-RH
        FBtr0330609
        6071
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Hr3-PI
        FBpp0402891
        871
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Hr3-PA
        FBpp0087456
        487
        Hr3-PC
        FBpp0087454
        694
        Hr3-PD
        FBpp0111711
        456
        Hr3-PF
        FBpp0297438
        487
        Hr3-PH
        FBpp0303459
        529
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        Unconventional translation start postulated (ACG encoding Met); FlyBase analysis.

        translation_exception: non_canonical_start_codon

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

        Monocistronic transcript; alternative dicistronic transcript(s) exist.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Hr3-RI
        Secondary FlyBase IDs
          References (0)