FB2026_03 , released September 17, 2026
Transcript: Dmel\fne-RL
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General Information
Symbol
Dmel\fne-RL
Species
D. melanogaster
Annotation Symbol
CG4396-RL
FlyBase ID
FBtr0481633
Feature type
Associated gene
Evidence Rank
Length (nt)
8872
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 61 )
Sequence
AGTCTTCGGCGCATCCAGCAAACGCGGTTCTTTTTTAAGCGCGTTTTCGTATTATTCTACTCATATGATTTATCATTTGC
GTCGCTATATGATTTCTCCTTGTTTCCGTAGTATGACAAGCCACTACTACTAAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAAAAAAAGAAAACACAACCAAATAAAAAACAACAACAACAACCAATATCAAGCGGAAGACGTG
GGAGATGGCCCAGGTGCTCTAAACACATCCTTGCTGGCCGAACGAGCGAAAAATTCCTGGGGAATACCGGCAAACAACCT
TCACTCAGTCAGTACGTCCCCAAAAAACTTTTTTATATCTTTTTGTATATGTGTGTGAGTGTGTGTGTGATCGCAAGTGC
AGGATAACCAGAAGTATCCGATTTCGAAACCTACATTCTCAGATCCTTTGATAAGCTCAAGGCCTAGGCTTAGAAATTCG
AAACTCAAGATAGACCCCTGAATATTGTGCTCAGTGTCGATCCACAAAAACCAATTGAGAGCGTTTTAACACAAAAGTCT
GCTGGCAGCAATCAACTTTAGGCCGAAATTATCTAAAATCCACGATCGAAATCGTTAATAAAACGAACAGAAATTGCATA
CAACTATCATCAGGATTTTTCACTGTTTCAATTTTGTGTTGTTGACTGATACGAAGATCAAAGATAAAAGAGACCAAATT
CGATAAGGAAAAGCAATTCTCCCACACAACAGAGTATATAATAAAAATAATAATAATAATAATAATAATATAGTATACAA
TTTGATTAAAACATACATTTGATTTCAATCAGTGTGCGCTAGATAGAATCACACATATATATATATATATACGTATATAC
GGATAACATTTGATTACCTTCGTCGGTGAGTGTCTAGCCAATCAATCTATAGCTTATAGGAACCATACCATATATACCAC
AAGGTTTTATACTGAATTTATAAAATTTTGGGTAAGCGCGCAGTGCGCATCGAAAGGCCCCATCAAAGCATCAACACCAA
ACTCAATATAAACTAAAAAAAAAAAAAACGAAAAAAAAAACAAAAAACAAAATACCATAAGCAAGTGTTTTTTTGTCGCA
TATAAATAAAATTTACATATTTACAACATACGAGACGGAAGTTAAGCAAAAGTAATATTAATATAAAGACTTGAATTTCT
CAAAGAAATAAATATTTATACAAGAACAAGCGAAGAAATAAGAAGAACAAGCAAAAAAAAAAAACGGACTTCCAACGATT
TCAAAATACGACGAAAAATACGAATTACGAAATATTTTTTAAAGCAAGGACCCAGCAAAAAAAGATATGATATGACTAAA
TCTACGCAAATCGGTTAACAAAAATATTTGCCAAATCTATGTATTGAATCAAAAACAAATAAAACGGAAAGAAACCCGCA
TACTTAATGAAAAATTGAACGTCGAGCTACAAGAATTTATACGGAAAACAGAGGCATCGCAGAAAATAAAAAGAAAAAAA
GAATAAAAAACAGCGAAGCAGGAAAAGTGCAAAAGCGGATTTATTGGAAAAGCTGAGTGGAAAAATCGAGATCAACGGCG
ATCAGCGTTAAAGTGATATTTTATAAAAACCGAAAATATCAGTTAAGGACAACGACTTATAAGCCAGGAAATCGTTGGAC
AAAGGAGCGTGCAGACCAAAAAGAGAGCGAACGAGTGAGAGAGCGAGTCGACGCGAAAGAAAGTCCTTTTTGTGCAATCA
ATATACATCTATTATATAGTCAGTCGGACTCAATTCCCCGCTCCCCATTAGAACACACTGTATGACAGTGTAACTTCTTA
AACGCACCTCGCTCCCACAACTTTTTCGATTTCGTCTCGCCAGCGAAGCACATTGAGTGAAAACGAGCGAGCAATCGAAC
AGCCATCATTTATCAGAGGAAATAAACGGATCACCGAGAAAGAGGGAAATTTTTTAACCGCAGAGGGAAAAGCAAACAGA
CGAGTCGAAAGGAAATACGAAGGAAAAGTCAACAAAAAACCAAACACCACCAAATAAAACCAACTACTATTAATTTAACG
CAAACATTAACGAATAATCATATTCAAGCGGTATATATATATATATATACACAAGAGGATAACGGATAACACAACTAACT
AAATATATATATATATACGATATATGAATGTATATTTGAAAACCAAAGCTAAGTTCCAGTCAAAGAAAAAAACCAAATAA
ACCAGCGCAAATTTAGTAAAAGTATAATAAAACGAAAAAAACCAAAACAAATTATTGCTATCTTTTTGCATTTTTGCAAT
TTTATAAAAAAATAACAAAGAAAACGAAAAACAAACAAAACCAAAAACCCACAACTAAAGATCATAATAATCTTTAAAAT
TCGGAGAAGCAAAAAGAAAATAAGAAGTAAACACATTTAGCAAAATTTACTCTTTTATCTAAACGAAAACAAAAGAAAGA
CATAAGAACAAAAAACACACAAATCAAATTAAGACCTAATTCAAGCATAAATTAAATTTTAAACGTTTTAGACAGAGAGA
GAGAGCGCTCTAAACTTAACTTAAAAAGCAAATACATTTTTTTCGCGATCGTAGTTGATCTAAAACCCCCCAGAAAAAAG
CCCAAATAAAATCTGCGGAAAAAAAACCTAACTTTAGGCGGGACTTGTGCAAAGCGCTGAAAATACCGCCCCCCCCCAAA
AAAAAAAAACGAGCAGCTCTAACTTGTAAGCGAATACCAACCGAGCAGTGAGATTAACTACTAACCAAAAAGGACGAAAT
CAGGACCGGATTTCAGAACCACAATCACAATGACCAACGCCATGGATATTGTGAAGAACGGCAGTGCCAACGGATCCGTG
GATGGCAGCAATGATGAGTCGCGCACCAATTTGATTGTCAACTATCTGCCGCAAACCATGACGCAGGAGGAGATGCGATC
GCTCTTCTCCAGCATCGGTGAGCTCGAGAGTTGCAAACTGGTGCGTGATAAAGTCTCAGGTAATTTGGTCTTGCCAGCAT
CGTTGACCGCTCTCAATCCGGCATTGCAGCAAGGTCAGAGTCTGGGCTATGGATTTGTTAATTACGTCAGGGCCGAGGAT
GCTGAGAAGGCTGTGAACACCCTGAACGGTCTGCGTTTGCAGAATAAGGTTATTAAAGTATCATATGCCCGTCCAAGCTC
AGAATCTATTAAGGGTGCTAATTTATATGTATCGGGTCTTCCGAAAAATCTATCACAACCAGACTTGGAGGGGATGTTTG
CTTCGTTTGGCAAAATAATTACATCTCGTATACTCTGTGATAATATTTCTGGTCTATCGAAGGGTGTCGGTTTTATTCGC
TTCGATCAGCGCAACGAAGCCGAGCGAGCCATCCAGGAGTTGAATGGCAAGACCCCGAAAGGATATGCCGAACCGATCAC
CGTCAAGTTCGCCAACAATCCGAGCAATAGCGCCAAGGCTCAAATTGCCCCGCCCCTTACCGCCTACTTGACACCACAGG
CGGCAGCGGCCACTCGCCGTTTGGCCGGAGCTCTGCCCTCCGCCGGTCGCATTAGCATTGGAAAGAGTCCCATGTTAGCG
ATTAACAAGGGCCTACAAAGGTACTCACCGCTGGCTGGCGATCTATTGGCCAATTCGATTTTACCGGGAAATGCCATGAC
TGGATCGGGATGGTGCATATTCGTCTATAACCTGGCCCCGGAGACCGAGGAGAACGTGCTGTGGCAGCTATTCGGGCCAT
TCGGTGCCGTTCAATCGGTGAAGGTGATCCGGGATCTGCAGACCAGCAAGTGCAAGGGATTCGGATTCGTGACCATGACC
AACTACGATGAGGCCGTGGTGGCCATTCAGTCGCTGAATGGTTATACCCTGGGCAATCGGGTGCTGCAGGTCAGCTTTAA
GACTAACAAGACCAAAACCACTTAGGCGAACCAGCCAATCTGGACTAGACCTTTCCAATACTCCACGATCTGTTTGATTT
AACAACAACCTAGACTATAGATTGATCTGATCTGATAAGATATGATGATATGATACGATGATATGATGTGACAAAGACAG
TGTAGTCGAAATTGCGAAATTTAGCGCGAGTTTATGATATGTCTATCATTTGATTTGTACGCTAAACGAAATTATTATGA
TTGTAATTCTAATGAAATCTTAGTGAAAATTGATTTATTTCCATCTCTATAATTTAATTTTATTAACTAATCCAAGAAAT
GAAAAAATGCAAAAAAAAAAAAACAAACAAACAACAAACAAACAAAGCTTGAATGAGGCAACCAAAAAACACAACACAGA
AACTAAGGAAAACTTTAGACAAAAAGGAGATGAGCCAGACGACAACTGTCTATAAATTGACAAATGAGAAAAATGAGAAG
GTAATAGGGTCAAAGGAAAAACAAAACAAAACAAAATAAAAAACAAAAAGCGAAAAACGATAAATAAAAAACCGCAAAAA
TATGAATGAAAATGATCTAAGTCGCAATATATAGTAACTATTTTTTTTTTTTTAAACTTATGTATATGTAATTCAATTCG
ATTATATTCAATTAAACAAAGTATTTAAACAAGCTAACCAAATGATTTAATGTCTATTGATTTAGGAACTACCAGCATAA
CTCTCTCAGCTTACCTAAGTACTTATTATAATGGATATGCATAAAAAATATTGTATTGTATTGTATTGTATCTTGTGTTC
GTTTTGCAACCCTAACTTACATTACATTACATTAATTCTAGTGCTATTCAGCTCTTATATTTAATTCGATTCGCCTTGAT
TTACACTCGAAGACGAAACGAAAATCGAAGATATAGCCGCGATATATCCTCCAAACGTAACAAACAAAACCCCAAGCACC
CAAACACACACACTCACTTGTAATCATTATTATATATATATGTAACCAGATTTAAATATCTTTTTTTCGTCGTCTAAGAT
TCGTATTCGTATTCGTCAAGTGCAAACCAAAGTAAATGAAACCAAGAAAACTTATTATATTATATTACATTATATATTAT
TACGCCTACTTATTATTCCATTTTTATAATTATTATAACTTATTGAATGCAACCAAGCGAAACCAAACAAAAGCAAACAA
AAAAAAAAAAAAAACATAACTACAACTAAAAATATATATTTATTATTAAATAAATGTGTGACTTATTCCAAAAACTATGC
AAAAAAAAAAAATGAAAAAACACAAAAAACTAAAACACAAAATTTGTTTTCTTTTCTCCCCAAATAACTAACACCACACA
CACGCACACCTAAACTAGAGCTGGCACGACTTCGATCGATAGAATCGATTGGGTTATTTTATTCGACTCCATCTTTTTCG
AAATAGAAATGCCTATAGAATATATTCGCGATTCATTTCAATATTATCATTACTAACGATGGCTTGCCAGCTCTAATCTG
TACCCACCTGAAAATTGGCAATATTGCAGGCAAAACGCTTTCGCAGTTGAAGTGATCATTTAATAATTGGATCGGATTGA
AGATGAATCGAAATATGGCCAGCTAAAATCGGAACTTCAGCCGTGAAAATCGCTCCACACAACAAATACACAACAACAGC
ACTCGCATTTATACAGATATAATTAAAATACAGATTAAGTTTCAACGCTCTCTAACGTATAACTAAGTTTTAACTAAGTT
TTACGCCTATATAAATAAATATATAATCAAACACGAACTATATGTACGCGCATCTATATTAATTCAATTAAAGATTGTTT
ATTCGATTTTCCACTTCAATAGTCTAGTTTTCAAGTCCGAGATCATTTCGTAGAGTCTACCAACAATCAATGTGTGTGTC
TGTAGTTTAACTTAAGACATTTTTAGGAAGCAAACATTTTTTTTTGTGTGTACTTAGGGCTGAAAGGTCAGGCCACATCT
ACATGGCGATTGGCCATAAAAAATAATAAACACAAGAAAAAAAACAAACAAACCTTAAACTAGGCAAACCAAGAAAAACC
AAACAAAAGAACTCAAGAAAAGAGGAAGTTGCGAAAGCAAATTGAAAACACCAAATTTTTAAGTATATAACATAAATGAT
GTAAAATTTTTTAAACAAAGATTTATAGTAAAATTTATTAAGGTATTAAGTATGTATGTATAACGATATATACAAATTAC
ACAAGGATAAGAGAATCAAGAGAAACCACTGCGAAAACGCGAAATTCAATGGAATATGAGCAATGTGAAATACATTAAAA
AAATACCTAAAATTACCTAGAAACGCGAAATCAGCAAATAGACCGGAAGTCCTCGAAAGGCGACTGCTTGCAAGCAGTGG
CCTCTCATATCCGGTCTGCCCTATGCAAGCAGTTTGCCATCGAGACTAAAGACAAAGACACAAAAAAAAATGAACAGGTC
TCCACTTGCTGATTCGTTTTCCACTTCCCGGCGACTAGTTAACCTACTCAATACTCAATACGACATATGGAATAATCAAG
TAATCAAGTAATATCCGCAAAATAACCGCCGCAACGCTGCTGCGCAGGCGCGTGTGTCATTCACAAAAGCAATATGAAGA
TGTGGCGCGAGTTGGCTGTTTTGGCCCACGCTGACTTACTATATATATACTATATGTATGTATATGTATATGTATGGGAA
AGGCGACTATATGACGCAGTTGTACAAATCGCAACTCAGCGACTCGGTCACATTCATTAACGGCACCTACGCCGCCACTT
ACAATTTACCCGAAAAAAAAAAAAACAAAAATGAAAAAAAATCACCCATATTAACCGAAGCGTATAAGTTTAAAATTCAG
CTAAATAAAAGCCGAAGATGAGAAATACACGCAAAATCCATACACCGATCAGTTGGCGAAAGTTCTTCGATATTCATTTT
AGCAAAAGAAAACAAAACAAAAAAACCAAATAAATAAGAACAGCAGAATGCAAAAACTATAACTGAACCCAACAATGAAA
ATCATCAACTAAGCATGAAATGCATTTAAAAATTAAACACAACAAATACATATTTATTTATATATATATATAGATGTACA
TGTCTACTTGTATGGCCAGGATAGCGAAAATATGAAATATAGCCCCCGATGACAGAATCCAGAATTGAAAATCGAAAACA
GAGCAACACCAAAAACGGAAATGAATTTGAGCTGAGAAAATCGTCTAGAACGGAAACCCCAAAAAAACCAAAAAAAAAAA
AAACCCAAAAATACCCGAAAGTGAAAGTGAAGCGATTTTGCGACGCCTCCCGAAGCTACACCCGAAAATCAACTTCCAAC
ATTTTTATTGATATACACTAAAATCTAGACACTTAAGGCGATTTCATCGATACCAAAATCTAATCTAAGACGAGATTGCA
TGCAAGTTAGCGAATATGAAACTTCAATTTAGTGTGTAAGCATCGATAAAACGTGCGACAGATTATGCAAATCTACAGAA
TTAAGCCATTAAAAGCCAAAGAGCGTTAGAATGCCAGAAATTTCAATAAAATTAAATGGTCGCCTGAGGCAGAAAACACG
GTAATCAGTGTTGAATGTTAAATTACTTGCTAAATTCAAGCAGATAGTTTAAACAAATAACAAAAAAAAAAAAAAAAAAA
AAATAGGGAGAAGACAAGAAAATATACGTAGCCGCTTTGTCAGACGGAACGCGCCCAAACCAAACTAAGTAACTAAGTAA
ACAGAAATAAATTAAAATAAATTAAATGAAAAAAAAAAAATCGCAAGAATATTTAAATCAATTTTGTGCATAAGAAAACT
CGATAACCGTTATATACATATGTATGTATATGTAAGCCAACTACATATGTGTGTGTGAGCAAGAACAAGATCACAAATCA
AAATAAATATAAAAAAATGCAAAAAATAAAAATCATAACTCAACTTCAAACTTAATTAATTATTATCCATTTGATTGTGT
ATGCTAATTATTATTGTCTATAGCGTATCGTACACATATTAATATACTTTTCGTGCAAATCCAAGGGCAGCACCTATTTA
CCAGCATTACCCTACGATCGTACTTATCCAATTAGTTAACCATATACCGCATACCCATGTACTTACCTTACTTTTAAATA
TGCTTACTTAATCACATTTCGATATTGTATTCGTAGCCCCTGAGTAGAACTATTTCAATTGATTTTGTACACACTCCAAG
TCACACAATCCAAACCCGAAAAACCGCCCAGCAGCTAATGAAATGATCTAACTTAATGTAATACATACAACAACGTAAAA
TATATTGGAGGCCTGTATGAATATGAATATGTTTTCGATCACAGGACATTGCAGCTCAAGGATGCACAAAGGAAATGCGA
ATTCTTCAGTTCGAAAAATATTCGAAATTGTTTCACAATTTTCTAAAATTTTCGGTCATTTCTGCAGGCCTCTAATACAT
CTAAATGGATATATGCATATTTGTATGTATTTACCAGCAAAATATATCTAACTAACACAGACACAAACAGTTCACACTTA
CACACCCACACACACACACTCACACAGTAAAGGAAATGATACCAAGGTGACACAAAATTTAGATGCATATTATTATATAA
CTTATATTGAAAAACCAAAAGCGATAAGATGAAAACGTAAATTTTACTATACTCGTACATATAAATTATATGAATGTATG
TAAATTATTATTATATTTGTATTTTATTGTATGTATTAGTTTTGTTCTACGCTCTTTTGCTCTTTCATAAACAAAAAACA
AAAATTTTAAAACGAAATCCAAACGAAACTTGATAACACAAAAACTAAAACAACAAAAAGCCGGCAAGCAATGGTATACA
AAATAAATAAAAAAAAATATGACAAGAGAAAATCCACAAAAAAATGAAATAAAATTGAATGAAAAATTTACC
Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0073712
3937
FBtr0113493
7321
FBtr0306738
8154
FBtr0306739
8626
FBtr0308694
4682
FBtr0333319
7113
FBtr0333320
7579
FBtr0343650
7653
FBtr0343651
7104
FBtr0481632
7707
Polypeptides
Derived from THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0428415
371
Derived from OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0073543
356
FBpp0112400
356
FBpp0297664
356
FBpp0297665
353
FBpp0300900
356
FBpp0305511
356
FBpp0305512
356
FBpp0310243
353
FBpp0310244
353
FBpp0428414
371
Comments

Extended 3' UTR based on RNA-Seq and/or EST data.

Microexon supported by FBrf0246871, FBrf0246833.

External Crossreferences and Linkouts ( 1 )
Crossreferences
RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
fne-RL
Secondary FlyBase IDs
    References (0)