A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}CG11486EP3109 Insertion

General Information
Symbol Dmel\P{EP}CG11486EP3109 Species D. melanogaster
Name FlyBase ID FBti0008024
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG11486, CG32486 Viability / fertility
Causes allele(s) CG11486EP3109 Stock availability 1 publicly available
LINE ID EP(3)3109
Genomic Location
Chromosomal location 3L ( 63A6 ) Sequence location 3L:3,072,411..3,072,411 [+]
Map ( GBrowse ) detailed view FBti0020028 FBti0068493 FBti0025603 FBti0102390 FBti0106508 FBti0113093 FBti0112222 FBti0102256 FBti0112500 FBti0100020 FBti0057808 FBti0112534 FBti0107050 FBti0104800 FBti0029315 FBti0059617 FBti0112481 FBti0125494_1 FBti0125494_2 FBti0008024 FBti0047846 FBti0109954 FBti0102744 FBti0040282 FBti0144028 FBti0045211 FBti0143956 FBti0143922 FBti0054735
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
3
(BDGP Project Members, 1994-1999)
Sequence Location
3L:3,072,411..3,072,411 [+]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
63A6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
63B7-63B7 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025287
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG11486
(Kraut et al., 2001, Gene Disruption Project members, 2001-, Kraut et al., 2001)
CG32486
(BDGP Project Members, 2000-)
hide Alleles and Phenotypes
Causes alleles
CG11486EP3109
(Kraut et al., 2001, Gene Disruption Project members, 2001-, Kraut et al., 2001)
Lethality
References
Sterility
References
hide Phenotype Manifest In
anterior fascicle & synapse | supernumerary
(Kraut et al., 2001)
intersegmental nerve
(Kraut et al., 2001)
hide Detailed Description
Statement
Reference
Mutant larvae expressing CG11486EP3109 under the control of Scer\GAL4elav-C155 have strong ISN neuron pathfinding defects. Mutant larvae expressing CG11486EP3109 under the control of Scer\GAL4elav-C155 have excessive or ectopic synapses.
(Kraut et al., 2001)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(3)3109
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17263
w1118; P{EP}CG11486EP3109/TM6B, Tb1
hide Linkouts
hide Comments
Location 3L:3055943-3055944 confirmed by FlyBase alignment of dbGSS accession AQ025287 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(3)3109
(Kraut et al., 2001, Kraut et al., 2001, Lee and Treisman, 2001, FlyBase, 1992-)
ep(3)3109
(FlyBase, 1992-)
P{EP}CG11486EP3109
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EP3109
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Kraut et al., 2001, Curr. Biol. 11(6): 417--430
A gain-of-function screen for genes controlling motor axon guidance and synaptogenesis in Drosophila. [FBrf0135708]
Lee and Treisman, 2001, Curr. Biol. 11(14): 1147--1152
Sightless has homology to transmembrane acyltransferases and is required to generate active Hedgehog protein. [FBrf0137202]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Supplementary material
Kraut et al., 2001, Curr. Biol. 11(6):
A gain-of-function screen for genes controlling motor axon guidance and synaptogenesis in Drosophila. [FBrf0135968]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]