FlyBase Aberration Report: Dmel\Df(3L)RM5-2

General Information

Symbol

Df(3L)RM5-2

Species

D. melanogaster

Name

FlyBase ID

FBab0026857

Feature type

chromosomal_deletion

Computed Breakpoints include

65E;66A17

Features within 65E--66A17

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

Delta2-3 transposase

(Grasso et al., 1996)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Grasso et al., 1996)

Breakpoints

65E;66B-66C

(Grasso et al., 1996)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Me << bk1 << l(3)j1B8 << Clk << bk2 << pbl

Genetic mapping information

Comments

Comments on Cytology

Limits of break 1 from polytene analysis (FBrf0091437) Left limit of break 2 from inclusion of pbl (FBrf0102727) Right limit of break 2 from non-inclusion of pbl (FBrf0091437)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Ank2

(Koch et al., 2008)

Clk

(Allada et al., 1998)

corset

(Ghabrial et al., 2011)

(Allada et al., 1998, Grasso et al., 1996)

ivy

(Ghabrial et al., 2011)

l(3)07217

(Allada et al., 1998)

l(3)j1B8

(Allada et al., 1998)

pbl

(Allada et al., 1998)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

M(3)65F

(Grasso et al., 1996)

patulous

(Grasso et al., 1996)

pbl

(Allada et al., 1998, Grasso et al., 1996)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

The Df(3L)RM5-2 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Homozygotes are embryonic lethal.

(Grasso et al., 1996)

Stocks (2)

Bloomington

4502

Df(3L)RM5-2/TM6B, Tb⁺

Kyoto

107765

Df(3L)RM5-2/TM6B, Tb¹

Notes on Origin

Discoverer