FlyBase Aberration Report: Dmel\Df(2R)BSC26

General Information

Symbol

Df(2R)BSC26

Species

D. melanogaster

Name

FlyBase ID

FBab0029945

Feature type

chromosomal_deletion

Also Known As

Df(2R) BSC26

Computed Breakpoints include

Features within 56C4--56D10

Sequence coordinates

Member of large scale dataset(s)

Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)

Nature of Aberration

Cytological Order

Progenitor

P{lacW}cora^k08713

(Parks et al., 2004, Deal-Herr and Cook, 2002.12.17)

P{PZ}hts⁰¹¹⁰³

(Parks et al., 2004, Deal-Herr and Cook, 2002.12.17)

Mutagen

Delta2-3 transposase

(Deal-Herr and Cook, 2002.12.17)

recombination

(Deal-Herr and Cook, 2002.12.17)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Parks et al., 2004, Deal-Herr and Cook, 2002.12.17)

Breakpoints

56C4;56D6-56D10

(Parks et al., 2004, Deal-Herr and Cook, 2002.12.17)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Genetic mapping information

Comments

Comments on Cytology

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

cora

(Chen et al., 2005)

hts

(Wilson, 2005)

wbl

(Deal-Herr and Cook, 2002.12.17)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

par-1

(McDonald et al., 2008)

Tbcb

(Baffet et al., 2012)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Lethal in combination with Df(2R)BSC135. Inferred to overlap with: Df(2R)BSC135.

(Christensen and Cook, 2006.1.19)

NOT in combination with other aberrations

Stocks (2)

6866

130330

Notes on Origin

Discoverer

The stock contains a second-site deletion uncovering l(2)gl.

(Roegiers et al., 2009)

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

The deficiency chromosome retains the w^+mC marker from P{lacW}cora^k08713.

(Deal-Herr and Cook, 2002.12.17)

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

CalpA⁶⁸⁶⁶

(Reinecke et al., 2011)

Df(2R) BSC26

(Kruer et al., 2013, Wilson, 2005)

Df(2R)BSC26

(Park et al., 2020, Gonçalves et al., 2018, Murakami et al., 2017, Baker et al., 2015, Clough et al., 2014, Galindo et al., 2014, Hill et al., 2014, Tsai et al., 2014, Baffet et al., 2012, Yuan et al., 2012, Ohler et al., 2011, Pielage et al., 2011, Reinecke et al., 2011, Roegiers et al., 2009, McDonald et al., 2008, Murakami et al., 2007, Chen et al., 2005)

Df^BSC26

(Pielage et al., 2011)

Name Synonyms

Secondary FlyBase IDs

References (25)

Report Sections

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