FlyBase Aberration Report: Dmel\Df(2R)ED2076

General Information

Symbol

Df(2R)ED2076

Species

D. melanogaster

Name

FlyBase ID

FBab0033371

Feature type

chromosomal_deletion

Computed Breakpoints include

[47A10-47A10];[47C1-47C1];

Features within 47A10--47C1

Genomic Maps

JBrowse

Sequence coordinates

2R:10,476,784..10,476,784 (Df(2R)ED2076:bk1)

(DrosDel Project, 2007.6.25)

2R:10,819,986..10,819,986 (Df(2R)ED2076:bk2)

(DrosDel Project, 2007.6.25)

Member of large scale dataset(s)

Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

(Ryder et al., 2007)

Nature of Aberration

Cytological Order

Progenitor

P{RS3r}CB-0768-3

(Ryder and Roote, 2005.11.4)

P{RS5r}5-HA-1287

(Ryder and Roote, 2005.11.4)

Mutagen

FLPase

(Ryder and Roote, 2005.11.4)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Ryder and Roote, 2005.11.4, Ryder, 2003.6.17)

Breakpoints

47A10;47C1

(FlyBase Curators, 2008)

Causes alleles

Carries alleles

Transposon Insertions

P{3'.RS5+3.3'}ED2076

(Ryder and Roote, 2005.11.4)

Formalized genetic data

Genetic mapping information

Comments

Comments on Cytology

Confirmed by 3-step PCR confirmation as shown in http://www.drosdel.org.uk/del_confirm.php Confirmed by lack of complementation to a known lethal mutation predicted to fall between the progenitor insertions.

(Ryder and Roote, 2005.11.4)

Limits of break 1 computationally determined from location of progenitor P insertion on genome sequence between P{lacW}Hr46^k10308 and P{PZ}lola⁰⁰³⁴⁹&P{EP}lola^EP952 Limits of break 2 computationally determined from location of progenitor P insertion on genome sequence between P{lacW}l(2)k00909^k00909&P{EP}EP2619^EP2619 and P{lacW}l(2)k15826^k15826&P{EP}EP471

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

lola

(Otte et al., 2009)

Rab3

(Graf et al., 2009)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Hr3

(Otte et al., 2009)

l(2)47A3

(Otte et al., 2009)

l(2)47A7

(Otte et al., 2009)

l(2)47A9-5

(Otte et al., 2009)

l(2)47A9-6

(Otte et al., 2009)

RNaseZ

(Otte et al., 2009)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (39)

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Stocks (2)

Bloomington

8909

w¹¹¹⁸; Df(2R)ED2076, P{3'.RS5+3.3'}ED2076/SM6a

Kyoto

150414

w¹¹¹⁸; Df(2R)ED2076 / SM6a

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

Df(2R)ED2076

(Mallik et al., 2026, Hope et al., 2019, Lee et al., 2018, Dinges et al., 2017, Bae et al., 2016, Chen et al., 2015, Peled et al., 2014, Popkova et al., 2012, Peled and Isacoff, 2011, Graf et al., 2009, FlyBase Curators, 2008)

Df(2R)ED²⁰⁷⁶

(Otte et al., 2009)

Df^ED2076

(Ochi et al., 2022)

Df_2R_ED2076

(Nelson et al., 2016)

ED2076

(Djiane et al., 2013)

rab3-Df

(Kohrs et al., 2021)

Name Synonyms

Secondary FlyBase IDs

References (22)

Report Sections

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