FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Human Disease Model Report: peroxisome biogenesis disorder 5A
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General Information
Name
peroxisome biogenesis disorder 5A
FlyBase ID
FBhh0000050
Overview

This report describes peroxisome biogenesis disorder 5A (PBD5A), which is a subtype of peroxisome biogenesis disorder. PBD5A exhibits autosomal recessive inheritance. The human gene implicated in this disease is PEX2, which encodes a protein that is essential for the assembly of functional peroxisomes. There is a single high-scoring fly ortholog, Pex2, for which RNAi targeting constructs and alleles caused by insertional mutagenesis have been generated.

For loss-of-function mutations in the Dmel\Pex2 gene, as with loss of the human ortholog, mutants exhibit an inability to assemble functional peroxisomes.

UAS constructs of the human Hsap\PEX2 have been introduced into flies, including wild type and variants implicated in PBD5A; see the 'Disease-Implicated Variants' table below. Partial heterologous rescue (functional complementation) is observed. The fly model has been used to assess the severity of variants implicated in PBD5A, with some missense mutations exhibiting severity comparable to truncations.

[updated Aug.2025 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: peroxisome biogenesis disorder
Symptoms and phenotype

Newborns affected with Zellweger syndrome (ZS) are hypotonic, feed poorly, and have distinctive facies, seizures, and liver cysts with hepatic dysfunction. Bony stippling of the patella(e) and other long bones may occur. The neurological defects include demyelination, retinal dystrophy, hearing loss and seizures. Infants with ZS are significantly impaired and typically die during the first year of life, usually having made no developmental progress. Older children have retinal dystrophy, sensorineural hearing loss, developmental delay with hypotonia, and liver dysfunction. The clinical courses of the milder forms of peroxisome biogenesis disorder, neonatal adrenoleukodystrophy (NALD) and infantile Refsum disease (IRD), are variable and may include developmental delays, hearing loss, vision impairment, liver dysfunction, episodes of hemorrhage, and intracranial bleeding. While some children can be very hypotonic, others learn to walk and talk. The condition is often slowly progressive [from GeneReviews, Peroxisome Biogenesis Disorders, Zellweger Syndrome Spectrum, 2015.09.09].

PBD syndrome is characterized clinically by severe neurologic dysfunction, craniofacial abnormalities, and liver dysfunction. There are 4 main phenotypic classes of PBDs that were defined prior to the molecular characterization; three of them in order of severity, Zellweger syndrome, neonatal adrenoleukodystrophy (NALD), and infantile Refsum disease (IRD), form a spectrum of overlapping features. The most severely affected patients with classic Zellweger syndrome die within the first year. Zellweger syndrome is indicated by the "A" in the OMIM subtype designation; the less severe forms are indicated with a "B" in the OMIM subtype designation (BSC). The fourth class, rhizomelic chondrodysplasia punctata (RCDP1), displays a distinct PBD phenotype. [from MIM:214100; 15.08.10]

Specific Disease Summary: peroxisome biogenesis disorder 5A
OMIM report

[PEROXISOME BIOGENESIS DISORDER 5A (ZELLWEGER); PBD5A](https://omim.org/entry/614866)

Human gene(s) implicated

[PEROXISOME BIOGENESIS FACTOR 2; PEX2](https://omim.org/entry/170993)

Symptoms and phenotype

PBD5A is one of a group of peroxisome biogenesis disorders that presents in infants with severe seizures, profound hypotonia, and inability to feed; additional characteristics are craniofacial and eye abnormalities, neuronal migration defects, enlarged liver, small size, and bone abnormalities. Affected individuals do not show significant development and usually die in the first year. [from MIM:614866; 15.08.10]

Genetics

PBD5A is autosomal recessive and is caused by mutations in the Hsap\PEX2 gene. [from MIM:614866; 15.08.10]

Cellular phenotype and pathology

Peroxisomes are missing in skin fibroblasts. from MIM:614866; 15.08.10]

Molecular information

PEX2 encodes an integral peroxisomal membrane protein which is thought to be involved in peroxisomal matrix protein import. [from Gene_cards:PEX2, 2015.09.09]

PBD5A is one of a group of peroxisome biogenesis disorders resulting from disordered peroxisome biogenesis. Very long chain fatty acids (VLCFA) were found in the serum of a patient; three peroxisomal beta-oxidation enzymes were missing in liver homogenates. [from MIM:614866; 15.08.10]

External links
Disease synonyms
PBD5A
Zellweger syndrome
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

One to one: 1 human to 1 Drosophila.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    Peroxin 2 (Pex2) encodes a peroxisome protein important for sperm development. [Date last reviewed: 2019-03-14]
    Cellular component (GO)
    Gene Groups / Pathways
    Comments on ortholog(s)

    Ortholog of human gene PEX2 (1 Drosophila to 1 human). Dmel\Pex2 shares 30% identity and 50% similarity with human PEX2.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (0 groups)
      Alleles Reported to Model Human Disease (Disease Ontology) (3 alleles)
      Models Based on Experimental Evidence ( 3 )
      Modifiers Based on Experimental Evidence ( 0 )
      Allele
      Disease
      Interaction
      References
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      Delta2-3 transposase
      Delta2-3 transposase
      References (10)