Error reports from Eleanor Whitfield
1)
Gene or accession: CG18740
Gene annotation error
Genes CG18740 and mor should be merged.
Comments: In the new release the updated translation in protein_ID AE003711;
AAF55259 is wrongly assigned a new CG symbol, CG18740. In release 1 the
gene was stated to be mor (moira). It still is moira with a better
(correct!) translation.
thanks
2)
Gene or accession: CG18572
Gene annotation error
Genes CG18572 and r should be merged.
Comments: In the new release the updated translation in protein_ID
AE003503; AAF48639 is wrongly assigned a new CG symbol, CG18572. In release
1 the gene was stated to be r (rudimentary). It still is rudimentary with a
better, but still incorrect, translation.
thanks
3)
Gene or accession: CG1706
Gene annotation error
Genes CG1706 and CG11166 should be merged. .
Comments: CG1706 no longer exists in Celera release 2. Translation for
AE003841; AAF59266 was updated now is known to be a splice variant of
CG11166. Will CG11166 be the valid symbol as CG1706 has been dropped in
release 2 (ie the numerically first CG will not be the valid symbol)?
thanks
4)
Gene or accession: CG14767
Gene annotation error
Genes CG8575 and CG14767 should be merged. .
Comments: CG8575 no longer exists in Celera release 2. Translation for
AE003836; AAF59050 was updated now is known to be a splice variant of
CG14767. Will CG14767 be the valid symbol as CG8575 has been dropped in
release 2 (ie the numerically first CG will not be the valid symbol)?
thanks
5)
Gene or accession: CG18438
Gene annotation error
Genes CG18438 and brm should be merged.
Comments: In the new release the translation in protein_ID AE003529;
AAF49557
remains unchanged but the annotation is changed so that the correct gene
symbol is annotated \- brm. Please merge CG18438 and brm.
thanks
6)
Gene or accession: CG10517
Gene annotation error
Genes CG10167 and CG10517 should be merged.
Comments: In the new release the translation and annotation in protein_ID
AE003593; AAF51686 has been changed, and the annotation of AE003593;
AAF51685. Please merge CG10167 and CG10517, they are splice variants of one
gene. Will CG10517 be the valid symbol as CG10167 has been dropped in
release 2 (ie the numerically first CG will not be the valid symbol)?
thanks
7)
Gene or accession: CG1540
Gene annotation error
Genes CG1540 and CG18436 should be merged.
Comments: In the new release the translation and annotation in protein_ID
AE003765; AAF56794 has been changed, and the translation of AE003765;
AAF56795. They are now annotated as being 2 genes when in fact they are
splice variants of the same gene. Here I am guessing the numerically first
symbol CG1540 will be valid as both symbols have the same 'status'.
thanks
Nellie