The following information accompanied stocks donated to the Bloomington Stock Center by Exelixis, Inc. The information was provided by Annette Parks.
Information about fourteen deletion chromosomes that did not appear in Parks et al., 2004 (Nature Genetics  36:288-292 ; FBrf0175003) is included in the attached Excel spreadsheet.
In addition, the information on one of the Dfs published in Parks et al. was not correct. Df(2R)Exel8056 was constructed using P{XP}d09955 (2R, 7807732) and PBac{WH}f02736 (2R, 7958786). It was published as Df(2L)Exel8056 (FBab0037971) and the cytology given in the paper (28C4;28D3) is the cytology that would have been predicted from the coordinates had they been 2L rather than 2R coordinates. The predicted cytology using the 2R coordinates from Exelixis is 49D1;49E1 (predicted from http://flybase.bio.indiana.edu/maps/lk/genome-cyto-seq-map/ for Release 3).
CSV version of attached spreadsheet:
'Df','Chr','Start const','Start insertion','Start orientation','End
const','End insertion','End orientation','Start Coord','End
Coord','Size','Resulting ''hybrid'' insertion','Df cytology','Comments'
'New Dfs',,,,,,,,,,,,,
'Df(2L)Exel6022','2L','XP','d03590','minus','XP','d04563','minus',9439878,95527
12,112834,'P{w+mC=XP-U}Exel6022','30B5;30B11',
'Df(3R)Exel6282','3R','XP','d01551','minus','XP','d06384','minus',14409990,14566054,156064,'P{w+mC=XP-U}Exel6
282','91B5;91C5',
'Df(2R)Exel6285','2R','XP','d04914','plus','XP','d01556','plus',10547139,107399
31,192792,'P{w+mC=XP-U}Exel6285','52A4;52B5',
'Df(3R)Exel8159','3R','XP','d06006','plus','WH','f05002','minus',9809255,100851
29,275874,'P+PBac{XP5.WH5}Exel8159','88A4;88B1',
'Df(1)Exel9052','X','WH','f06362','plus','XP','d03720','minus',8986055,8991121,
5066,'P+PBac{XP5.WH5}Exel9052','8D10;8D10',
'Df(1)Exel9053','X','XP','d00034','plus','rB','e02394','plus',11429473,11441116
,11643,'P+PBac{XP5.RB3}Exel9053','10D5;10D6',
'Df(1)Exel9054','X','XP','d07122','plus','WH','f06409','minus',18423839,1847219
3,48354,'P+PBac{XP5.WH5}Exel9054','17D1;17D3',
'Df(3L)Exel9058','3L','XP','d01686','plus','WH','f03366','minus',4520054,453235
7,12303,'P+PBac{XP5.WH5}Exel9058','64B11;64B11',
'Df(2L)Exel9063','2L','WH','f04763','minus','WH','f06810','minus',18272825,1827
7277,4452,'PBac{w+mC=WHr}Exel9063','36E1;36E1',
'Df(2L)Exel9064','2L','rB','e04255','minus','rB','e02253','minus',9407703,94236
55,15952,'PBac{w+mC=RBr}Exel9064','30B4;30B5',
'Df(3L)Exel9065','3L','rB','e01179','plus','rB','e03403','plus',21434299,214402
93,5994,'PBac{w+mC=RBr}Exel9065','78D5;78D5',
'Df(3L)Exel9066','3L','rB','e04049','minus','rB','e03207','minus',21457326,2147
2256,14930,'PBac{w+mC=RBr}Exel9066','78D5;78D6',
'Df(1)Exel9067','X','WH','f00224','minus','XP','d02278','plus',18520231,1854326
5,23034,'P+PBac{w+mC=XP3.WH3}Exel9067','17D6;17E1',
'Df(1)Exel9068','X','XP','d03564','minus','XP','d05926','minus',18972891,189909
22,18031,'P{w+mC=XP-U}Exel9068','18B4;18B6',
,,,,,,,,,,,,,
'Correction',,,,,,,,,,,,,
'Df(2R)Exel8056','2R','XP','d09955','plus','WH','f02736','minus',7807732,795878
6,151054,'P+PBac{XP5.WH5}Exel8056','49D1;49E1','In paper with 2L instead of
2R. d09955 and f02736 mapped to 2R by both Exel and GDP. '