FB2026_03 , released September 17, 2026
Transcript: Dmel\Synj-RA
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General Information
Symbol
Dmel\Synj-RA
Species
D. melanogaster
Annotation Symbol
CG6562-RA
FlyBase ID
FBtr0071757
Feature type
mRNA
Associated gene
Dmel\Synj
Evidence Rank
Length (nt)
4409
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 13 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CACAGCTGCCGCCGGTGCATGTCATTGCTGTGTGTGCGTGTGTGGGTGAACTTGAGTGGGAGGCGGAAGATATTGGAAAA
ATTCCTCCGCTTTTCGATGTCTTAGCTTTAGCTGGACGCAAAACTTAAACTGCAGACAGTAAAGGACGAAATCACATTAC
TCGACTCAAAAGAAGACACACGGAAGAGAGATACCAACAAGATGGCCATGTCCAAGGTGATCCGTGTGCTGGAGAAGTCC
ATTGCCCCCTCGCCGCACAGCGTATTACTGGAGCATCGGAACAAGAGCGACAGCATCCTGTTCGAGTCCCATGCGGTGGC
CCTGCTGACCCAGCAGGAGACGGATGTCATCCGGAAGCAGTACACCAAGGTCTGCGACGCCTACGGATGTCTGGGTGCCC
TCCAACTAAACGCCGGCGAGAGCACCGTGCTGTTCCTGGTGCTGGTCACCGGCTGTGTGTCCATGGGCAAGATCGGCGAC
ATCGAGATCTTCCGGATCACACAAACCACTTTTGTCTCGCTACAAAATGCAGCGCCCAACGAAGACAAGATCAGCGAGGT
GCGCAAGCTGCTCAACTCGGGCACCTTCTACTTTGCCCACACCAATGCCAGTGCATCGGCATCCGGAGCGTCATCGTATC
GGTTCGATATTACGCTTTGCGCCCAGCGACGCCAGCAAACGCAGGAGACGGACAACCGTTTCTTCTGGAATCGCATGATG
CACATCCACCTGATGCGCTTCGGTATCGATTGCCAGTCCTGGTTGTTGCAAGCCATGTGCGGCTCCGTAGAAGTGCGCAC
CGTCTACATCGGTGCCAAACAGGCCCGTGCCGCCATCATTTCCCGACTGAGCTGCGAACGGGCTGGCACGCGTTTCAATG
TCCGTGGTACCAACGATGAGGGCTATGTGGCTAACTTTGTGGAAACCGAGCAAGTGATCTACGTGGACGGCGATGTTACT
AGTTATGTGCAGACGCGAGGATCGGTGCCACTCTTCTGGGAACAGCCAGGCGTCCAGGTTGGCTCGCACAAGGTGAAGCT
ATCACGAGGATTCGAGACATCGGCCGCCGCCTTTGATCGACACATGAGCATGATGAGGCAACGTTACGGCTATCAGACGG
TGGTGAATCTGCTAGGCAGCTCCCTTGTTGGCAGCAAGGAGGGCGAGGCCATGCTGAGTAATGAGTTCCAGCGTCATCAC
GGCATGTCAGCCCACAAGGATGTGCCGCATGTGGTGTTTGACTATCATCAGGAGTGTCGCGGCGGCAATTTCTCGGCGCT
GGCCAAGCTCAAGGAACGGATCGTAGCCTGCGGTGCTAACTACGGCGTCTTCCACGCGTCCAATGGTCAGGTGTTGCGCG
AGCAGTTCGGTGTTGTGCGCACGAATTGCCTAGACTGTTTGGACAGGACAAACTGTGTGCAGACGTATCTCGGGCTTGAC
ACGCTCGGTATCCAGCTAGAGGCTTTGAAAATGGGCGGCAAGCAGCAGAATATTTCGCGGTTTGAGGAGATCTTCCGACA
GATGTGGATCAACAACGGAAATGAGGTCAGCAAGATCTACGCCGGCACCGGGGCCATCCAGGGGGGATCAAAACTAATGG
ATGGTGCGCGATCTGCAGCAAGAACAATTCAAAATAACCTACTGGACAACTCAAAGCAGGAAGCCATTGATGTCCTGCTA
GTGGGCTCCACGCTTAGCTCGGAGCTTGCGGATCGGGCTCGCATCCTACTGCCCTCCAATATGTTGCATGCACCTACCAC
TGTGTTGAGAGAGCTATGCAAGCGCTACACTGAATATGTGCGTCCTCGAATGGCACGTGTAGCCGTGGGTACCTATAACG
TCAACGGCGGCAAGCACTTCCGCAGCATTGTGTTCAAGGATTCGCTGGCCGATTGGCTGCTCGACTGCCATGCCCTTGCC
CGCTCCAAGGCGCTTGTAGATGTGAACAATCCGTCGGAGAACGTCGATCATCCGGTGGATATCTACGCCATTGGATTCGA
GGAGATTGTGGATCTGAATGCTTCCAACATAATGGCGGCCAGCACCGACAATGCCAAGTTGTGGGCCGAGGAGCTGCAGA
AAACGATCTCGCGGGACAATGACTACGTGCTGCTCACATACCAGCAACTGGTGGGCGTGTGCCTATACATCTACATCCGA
CCGGAGCACGCGCCGCACATCCGGGACGTGGCCATCGACTGTGTTAAGACAGGATTGGGTGGTGCCACTGGGAATAAGGG
TGCCTGTGCCATTCGATTTGTGCTTCATGGTACTTCCATGTGCTTCGTGTGTGCCCACTTTGCAGCCGGACAGTCACAGG
TGGCTGAAAGGAACGCTGACTACGCGGAAATCACCCGGAAGCTGGCCTTCCCGATGGGCAGGACGCTAAAATCACACGAC
TGGGTGTTTTGGTGCGGCGACTTCAACTATCGCATCGACATGGAGAAGGACGAATTAAAGGAGTGCGTACGTAATGGAGA
TCTCTCAACCGTCCTCGAGTTCGATCAATTGCGCAAGGAGCAGGAGGCTGGCAATGTGTTTGGCGAATTCCTCGAGGGAG
AGATCACTTTCGACCCGACGTACAAGTATGATTTGTTCAGCGACGACTACGACACCTCGGAGAAACAGCGAGCGCCCGCC
TGGACAGATCGGGTTCTCTGGCGTCGCAGGAAGGCGCTGGCCGAGGGCGACTTTGCTGCCTCAGCCTGGAATCCCGGCAA
ATTGATTCACTACGGTCGTTCGGAGCTAAAGCAGAGTGATCATAGACCCGTGATCGCTATTATTGATGCTGAGATAATGG
AGATCGATCAGCAGCGGAGACGTGCTGTATTCGAGCAGGTTATCCGAGATCTGGGTCCGCCGGACTCCACGATTGTGGTA
CATGTCCTGGAGTCTTCAGCAACTGGAGATGAGGATGGACCAACCATATACGACGAGAATGTGATGTCAGCCCTGATTAC
CGAGCTATCCAAGATGGGAGAGGTCACTTTGGTGCGCTATGTGGAGGACACCATGTGGGTCACATTTCGGGATGGAGAAT
CGGCTTTAAATGCGTCTTCTAAGAAGAGTATCCAAGTATGCGGATTAGATCTTATCCTGGAGCTGAAGTCAAAGGACTGG
CAGCATCTGGTGGACAGCGAGATAGAGCTATGCACCACGAACACCATACCGCTGTGCGCTAATCCTGTAGAGCATGCACA
ACTCCTGCAGGCCATTACGCCGGAGTTGCCCCAGCGGCCCAAGCAGCCGCCCACACGTCCCCCAGCCCGTCCCCCAATGC
CTATGTCGCCAAAGAACTCACCACGCCACCTGCCCCACGTCGGGGTCATCAGCATTGTGCCCAAGCCGGCAAAGCCACCG
ATGCCACCGCAACCGCAATCTCAACCTCTAATTCCGTCGCCGCTTCAGCCGCAGGTGGCGCCGCCTCGTCCGCCGGCAAT
GGACACCACGCCATCCTCCAAATCGCAATCGCCAACGGAACTTGTATCCGCTAGTTCTTCGACGTCCTCTTCGGGAAAGA
CTTCGCCCACAGCTCCAGCTGTGCTCTCCGGTCCGCCGACGCCGCCGCGCCAAATGCAGAGCAAGCAGGCCACACCCGTC
TCGACGCCCACGCGCCAAGTCGGTTCGCCCAAGGATCCGATTCCATCTGATACCGCCTACGAAACCGCCAGTAATATTTA
CGAGGAGATTCAGGAGGATGTGCCTGCGCCACGCCATCCGCCGCCGGCTGGACCGCCGCCAGTGATAGGAGCACCAATGG
GCCCGCCGCCACCGCTGCCGAATCGCAGGGGCCCACCACCCATACCAAATAGGAGCGGCAATGCTCCACCGCTGCCCACG
CGACCCGCCAACAACTGAGCTGCAGGCTACGCACACGGGCTCGCTGTCTTGCACTCCGATTGCATTCCGAATCGCTGTAT
TTAATGTTATATATACTCGAATATATTGGGCCACTCTGGAGGAGAACTCCTGGCAATATCCGCACTTCGCATGGAATCTA
TGTTACTACCTGTTTGTTTGTTTCGATAGTTTCTAGCCGGAATCAAACTGAATTTAAAGTAAACAAATAAGTTCCACATA
GCTAAAGCCCAAACTACCCCACTCCGGTACTCTCTTTTTTTTTTTTTTACTTACTGGCCAGACGTACTCAACCCAATTGC
ACCGGATTTGCCGAGGGCGAAGAATGAATATAATGAAGTATATGGGCGACAAAGTATTACACTAATCTGCATAAATGTAA
TGTTTAAATAAATTATAGCCGTACTAGTCAAATTATGAAGTAAAGTTATAAAAACTGAAGAAGCAATAGAACTCTGTAAA
AGATTCCGATTCGAGCGACACACCCAAACACATGTATCCATTGTTATTGAACAACTATTGAGATAAATTACATATTATTC
CACATTGTT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Synj-RB
      FBtr0071756
      4243
      Synj-RC
      FBtr0308239
      4638
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Synj-PA
      FBpp0071671
      1218
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Synj-PB
      FBpp0071670
      1218
      Synj-PC
      FBpp0300559
      1218
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (4)
      Reported As
      Symbol Synonym
      CG6562-RA
      (FlyBase, 1996-)
      Synj-RA
      synaptojanin-RA
      (FlyBase, 1996-)
      synj-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)