FlyBase Transcript Report: Dmel\chm-RA

General Information

Symbol

Dmel\chm-RA

Species

D. melanogaster

Annotation Symbol

CG5229-RA

FlyBase ID

FBtr0079443

Feature type

mRNA

Associated gene

Dmel\chm

Evidence Rank

Length (nt)

2955

Evidence Score

Genomic Location

Genomic Maps

JBrowse

cDNA Clones Consistent with the Transcript ( 66 )

cDNA Clones, Fully Sequenced

Exact Match

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

LD08703

cDNA Clones, End Sequence Only (ESTs)

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

Sequence

Sequence Downloader

CATCCACCTCTGGCCACTCTAATCAAAACAATACAGGAAAACAGGCATTTTTGTGTACAAATATTAAAAAAAACATTCTG
CGCTACAAAAATGGCCTTGGAGTCCGGCAGCAGCAGCTCGGAGTCGGGCAGCTCATCCACAAGCGGATCCACCAGTTCGG
AAACGGGCAGCAGCTCGGACACGGATTCCAGCAGTGCGACGCCGGAGGAGAAGCCATCCACGAATTCCTCCGCCAAATCC
CAGACGCAAACACAACAACAAACTAATTCCGGAAATGCACAGAGAAGAAAGCCTGTTCCTGCGGCGTCGGAGGATAAACC
CAAGCCGAGCGTAGCGCCATCTAGCAAAAAAGTAAACAATCCTCCCAAAAGTAAACTCTCCAGCGATGACGACGAATATG
AGGACTCGGCGCCGCCGGCCAAAAAGAACTCACGTGCAATGGGCAGTTCCACTGTAACAGCGGCAGCTGCCGCCTCAGCA
GCCAGGAGAAAACCACCCGCGTCCGTCAACAAGCCAAGCAATCCCGCTAACAAACCGAGCAATCCTACCCAGCGATCGGC
CAACAACAACACAAATCGATCACTGGAGAACGGCGAGGGCAAGCGACCCTCGCTCTCCTCCTCGTCCAATAGCACAGATG
ACTCTATGAAGATCGTTAAAAACGGGCGGAAGGTTCCCCTCAAAATGGCCAGCACGGTGAGGCCCAAACAAATCCGAGGA
AAATTGCCGCCGGCAAAGAAAAACGGCGGGGGACCGGTGATCAGCAGTGACGGAAGTTCGGGCTCCGAGAGTGGCTCCAA
CTCGGGCGACGAATCAAGTTCAGGAAGCGAGTCTGAGGGAAGTGATTCCAGCAACTCCTACAGCTCGCAGCCAGTAAAAG
GAGGAGCTAAAGGTAAGAGAAGCGGACCAACAAAAATCCAAAACTCCGACAGCGAAGAAGAGCGAAAAGACAAGGCCAAT
CCCATGAGGAAACTGACGCGATCACTCAGCATGCGAAGGACAAAACAGCAACCCAAACAGGAAACCGATTCTGAATCCGA
TGGAGACCTAGAAGATGACAAAATTATGATCTCCAAAAGTCCCGCCAAAAAGCCAGCGCCCTCGAATTTGAACGCCAGCA
AAAGCAAAGTGAAAAGGGAACCAATCGGAATCAGCAGTGGCGTGCTGAGCTCCATTAAATCCCGACCCGTGTCACCGATT
ACCCAGACTGAGAAGAAGTGTCCCATCGAGGGCTGCGATTCATCCGGACATCTGAGTGGCAATTTGGATAAGCACTTTTT
GCCGGAGGCCTGTCCTATCTATCACAACATGTCCGCCTCGGAGTGCAAAGAGCGTGCCAATGAGAGAAAACTGAGGAATG
AACAGCGACTAAAGATGCCGGTTAACATTGTGACGGCGCCGGGTAACCAAAACACCAATCTCAAGACGCTCTCGCCTGAG
CAGCGCGAGTTTCTGGCCAAGATTCGCGAGTCAAGGGCTAACTTTAAGCCGGCGAATAACAATTTTTTAGACTCGAAGGT
AAAGCTGGAAAAAGACGTAACGGACGAGGACCGGGAACCAAATCTGGCAGGCCTGGTGCCTGACTATGATTTGCAATTGT
TCCGGGAAGCGCAAGCTCAAGCATCCGAAAGGATCGAAGACGAACTCAAGGACCTGCCCGTGGGAAAGGGAATAAAATAT
ATCAGCATGGGCAAGTACAAGATGAAGGTCTGGTATCAATCCCCTTATCCGGACGATGCTGCCCGCCTGCCCAAAATGTA
TATCTGCGAATTCTGCCTGCGCTACCAAAAATCAGAGACGGGCATCAAGCGGCATGCCGAGAAATGCGTCTGGCGGCATC
CGCCGGGCGATGAGATATACCGCAAGGGCAAACTACAGGTGTGGCAGGTGGACGGGAAACGTTATAAGCAATACTGTCAG
CATCTGTGCCTGCTAGCAAAATTCTTTCTGGATCACAAAACCCTCTACTACGATGTGGAGCCCTTCCTTTTCTACATTAT
GACGCTGGCCGATGTGGATGGATGTCATATTGTTGGTTATTTTAGCAAGCATATTCCTTTCCTGCAGGAGAAGAACTCGT
TTTACAATGTTTCCTGTATTTTAACATTGCCGCCATATCAGCGAAAGGGTTACGGAAGATTACTCATCGATTTCAGCTAT
CTGCTGACCCGCGTGGAGGGAAAAATCGGATCGCCGGAGAAACCTCTATCCGATCTGGGCCTGATCTCGTACCGCTCGTA
CTGGAAGGATGTGCTCCTGGACTACCTGTGCAATCGATCGGGAAACACGATCGCCATCAAGGATGTATCGCAGGAAACTG
CGATTTACTCATACGACATTGTGAGCACCCTTCAAGCTCTCGGAATGATGAAGTACTGGAAGGGCAAGCACATAGTGCTC
AAAAAGCAAGACGTACTGGATGAGTACGAGGAGAGGGTGAAGCGAAGGGGAACCTTCCCCAAGATCGACGACTCCTGCTT
AAGATGGCAGCCCTTCATCAATATCCAGCCGAGCTCATCTCCATAACCACGTGGTTGGAAGCATGCCAGGGCATGCTTTG
CAGACGCCGACGACGATGACGAATTCTTGGCTCCGAATTCTTGATTTCAACGATTTTATTTTTGGGTAGACATCTGAAGA
ACCACATCTCCAGTCCTTCCTTTGCATTTATCCTAGCGGATATATGCATTAATGTAGAATATGTTTTGTAACCACTTTCA
TAAACATGATACAATTGGAGAATGGTTTTTAGGGAGCTTGTAACTCAATTTTTTAATATTTGTTGGTAGATCTTAAGGCC
AGCCTATTGTAAACATATGTACGTGTGTGTGTCTGTACTTGTTATTAGCGAAGAATTGTAGTAATTAGAGTCTTAAGATA
CATAGTGAAATTCTCAAAACGAAAAAAAGCTTAAAAAGATAAGAGAAATATACTCGGTTTACGATCAAAGACTTG

Other Products of this Gene

Other Transcripts

Name

FlyBase ID

Length (nt)

chm-RB

FBtr0308610

2422

chm-RC

FBtr0332523

3302

Polypeptides

Derived from THIS transcript

Name

FlyBase ID

Length (aa)

chm-PA

FBpp0079071

811

Derived from OTHER transcripts

Name

FlyBase ID

Length (aa)

chm-PB

FBpp0300834

703

chm-PC

FBpp0304793

811

Comments

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )

Crossreferences

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

NM_135273

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

CG5229-RA

(FlyBase, 1996-)

chm-RA

(FlyBase, 1996-)

Secondary FlyBase IDs

References (2)

Report Sections

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