HAT1, HAT
histone acetyltransferase - acts as antagonistic cofactor to the histone deacetylase Rpd3 to modulate JNK-dependent transcription during pupal thorax metamorphosis and JNK-induced apoptosis - recruited by DJun and DFos
Please see the JBrowse view of Dmel\chm for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.39
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.45
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\chm using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: maternally deposited
JBrowse - Visual display of RNA-Seq signals
View Dmel\chm in JBrowse2-26
2-24.3
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
dsRNA has been made from templates generated with primers directed against this gene. RNAi of chm causes an increase in the number of class I da neurons. RNAi also causes alterations in the number of MD neurons and defects in dendrite morphogenesis.
chm may have a role in chromatin mediated gene silencing.
Mutations in chm result in late pupal lethality. Pharate adults have ectopic macrochaetae on the scutellum and on the thorax, and occasionally a large cleft separates the two hemithoraces.
Source for merge of: chm HAT
Source for identity of HAT CG5229 was sequence comparison ( date:000327 ).
Source for identity of: HAT CG5229