FB2026_02 , released June 18, 2026
Transcript: Dmel\chico-RA
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General Information
Symbol
Dmel\chico-RA
Species
D. melanogaster
Annotation Symbol
CG5686-RA
FlyBase ID
FBtr0080088
Feature type
mRNA
Associated gene
Dmel\chico
Evidence Rank
Length (nt)
3229
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 48 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CTGTTATTCCTATGCTGCGATAACGATAACAGCAAAGTGTCATCGCGAATAAATGTGGGTTTGATAATAAAGAATTGCGT
TGGTGAACAATAATAATACAAATGCTAAATGTATCGCGCGGATAACTAGTAAACACTGATTTCGCGCATATCGGGCATAC
GGGCAGCTAGACGTCTTAGGAACTAAGATTGGAAATCATGGCATCAATATCGGATGACGGCATGGCGCTGAGTGGCTACC
TCAAGAAGCTGAAGACCATGAAGAAGAAGTTCTTTGTGCTGTACGAGGAGACGAGCACTTCGGCAGCCCGGCTGGAGTAC
TACGATACCGAAAAGAAGTTCCTGCAAAGAGCCGAGCCAAAAAGGGTTATATATCTGAAGAATTGCTTCAACATCAATCG
CCGTTTGGACACCAAGCATAGATTTGTCATTGTGCTCTCCTCCAGAGACGGTGGATTCGGCATCGTTCTCGAGAACGAAA
ATGATTTACGCAAATGGTTGGACAAACTACTAGTTCTACAAAGGAACATAGCCAATTCGAATGGAACAGCGCACTCACCT
TATGACCACGTTTGGCAAGTTGTCATTCAAAAGAAGGGTATTTCGGAGAAAGTTGGAATCACCGGAACCTACCACTGTTG
CCTTACTTCAAAATCCCTGACATTCGTGTGCATTGGACCGGAGAAGACGCCCAATGGCGAGGATCGCGTTGCGAGCATTG
AAATACTTTTGACCACGATCAGGCGATGCGGTCATGCATCCCCACAATGTATATTCTACGTGGAACTTGGCCGCCAAAGT
GTCTTGGGATCTGGTGATCTGTGGATGGAGACGGATAACGCAGCTATTGCTACTAATATGCACAACACGATACTGAGCGC
TATGTCAGCCAAAACAGAGTCGAACACGAATTTAATAAACGTTTATCAGAATAGACCTGACTTAAGTCACGAGCCCATGA
GAAAGCGATCGTCGTCTGCAAACGAAGCATCGAAGCCGATAAACGTAAATGTCATACAAAATAGTCAAAACTCTCTCGAA
TTGCGCAGCTGCAGTTCGCCCCATAACTATGGTTTCGGCAGAGAGAGATGCGATAGCTTACCAACCAGAAATGGAACCCT
AAGCGAGTCCAGCAATCAAACGTACTTTGGTTCCAACCATGGACTGCGATCCAATACTATATCTGGCATCCGTCCGCACT
CAACCAACAAGCATAGTAATAGTCCAACGTTCACCATGCCATTAAGATGCTCAGAATCCGAAGAGTCATCAATTAGTGTC
GATGAATCCGACGACAACGGCAGTTTTAGCCACTACAGATTAAACACGCGGTCATCGGAGACGGCAATTCCTGAGGAAAA
CATTGATGACTTTGCCAGTGCGGAATTATTTAGCAAAGTCACCGAACAAAATGTAAGTGACGAAAACTACATACCGATGA
ATCCAGTCAATCCTACCGATGCTATCCATGAAAAGGAGAAGGCTGATATGCAGAGATTGGAAGATGCTTCGCTGCATTTC
AACTTTCCGGAGCACGCGTCGGAAAAGCTTGCTAAGGATTTTGATCTGGACTCTGATAACCAATGCTGTCGTCCCATTCG
CGCCTATTCGATAGGCAACAAGGTTGAGCATTTAAAGTTTAATAAGCGCCTGGGACACTTGAATGATACGGGACAGAATC
CGAATCGCGTGCGAGCCTACTCGGTTGGCTCCAAATCGAAGATACCGCGCTGCGACCTGCAGCGAGTGGTCCTCGTGGAG
GACAATAAACATGAGTTCACAGCGAATAGGAGTCAGAGTAGCATTACCAAGGAAGGAACCAGCTATGGCAGCAGTGCCAA
TCGACAAAAGAAGTCCACAAGTGCTCCACTCCTCAGTCTGAAGAACCAGATAAACTCCGACCGAATGAGTGACTTAATGG
AAATTGATTTTTCACAAGCAACCAATTTGGAAAAGCAGAAGTTCATCAAGAATAATGAAATTCCGAAATACATTGAAAAC
GTGTTCCCAAAAGCCCCGCGAACGGATAGCTCCAGCCTAACTCTGCACGCCACAAGTCAAAAGGACATTTTCAATGGCAC
CAAACTAAATAACACTGCGATCACATCCGAGGATGGTTACCTCGAGATGAAGCCAGTCGGTAATGGATACACTCCCAGTT
CGAATTGCCTGCCAATGAAAGTGGAGAAACTCAAGCTATCCGACTATCAGACAGCACCGCCACTCACCGCAACAGCCGCA
CCAGTGCACGATTTAAACAAAATTAGCACATACAATATATCCGCTGAGAAATGGAGAGAACAGCCCAGCAGAAGCGAGGA
AAAGAAGTCGAACTCGCCATTGAATGACAACACCTTTAGCTCGAAACCCACAAATGTCGAGAGTACAAGCAAAAGCCATG
ATGTTCATTCAGCAAATCAAATTGATTGCGAGAAAGTGTGCGCGCAGAGCAGCGATAAGCTAAATAATCATCTGGCCGAC
AAGATTGTCGAGAACAACAATTTGGATATAGGCGGGCATGAGGAAAAGAAGTTGGTTCATTCGATAAGCAGCGAAGACTA
CACACAAATCAAGGACAAATCGAATGATTTCACAAAATTTAACGAAGCCGGCTACAAAATTCTGCAAATTAAAAGCGACA
GCTCACTCATCTCATCGAAGCTATACCAAAAGGGTATACACAAGGATAACTTGGAGCGTTCGCAGAGACTTACAGAGAGT
GTGAATACGATTCCCGATAATGCCACCGCCACCGCGGTGAGCAGCAGCTCACTCACCAAATTCAATATAAATTCAGCAAA
GCCAGCCGCCGCCGCCGATTCGCGTAGCACTGGCACAGATCCAAGTACACCACAGAACATTCTACAGATTAAAGATTTGA
ATTTCCCCTCAAGGTCGTCGTCTCGCATATCCCAGCCGGAGCTGCACTACGCCAGCCTAGATCTTCCCCATTGCAGTGGC
CAAAATCCAGCTAAATACCTGAAGAGAGGATCACGCGAATCGCCGCCGGTGTCCGCATGCCCGGAGGATGGGAATACCTA
TGCGAAAATCGACTTTGACCAATCCGACTCCTCTTCCTCCTCATCGAACATATTTAATACGTAAAGTTTTGAAATTTATG
ACCCTATCCTATATATATGATTTGTTTAATATTGTACATTTATTGTAAATATTCTGACAAGCAAAGCTTACAATTTTGGA
TGCTAATAAATAAATTTTATTTAAATTAT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        chico-RB
        FBtr0303904
        3104
        chico-RC
        FBtr0333412
        3578
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        chico-PA
        FBpp0079677
        968
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        chico-PB
        FBpp0292907
        968
        chico-PC
        FBpp0305604
        968
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        chico-RA
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)