FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Mhc-RK
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General Information
Symbol
Dmel\Mhc-RK
Species
D. melanogaster
Annotation Symbol
CG17927-RK
FlyBase ID
FBtr0080906
Feature type
mRNA
Associated gene
Dmel\Mhc
Evidence Rank
Length (nt)
7341
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 161 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GGAATAGGAATCAGAGCAGCCAAGTGCTAGACCGAAAAAGGGAGCAAGAAAAACCGAAACAGAAACAGCGCCACGCACAC
CGATCGTCGAATCGAAAAGCTTTCGGGGTCTTACGGGATCCATGGGTATCAAGTTGCCCCGTATAAAAGGCAAGTTTACC
GGTTGCACGGTTCAGAACGGCTTTCGAGCGCGGAAGTTTTGGGCTCACGACGCGATTAACAAAGAAATTTTGAAAAGTCC
CAATATTATTTTTCGAGTTTTTAAGTTTCTAAACGAAATTTAAGCAAGATGCCGAAGCCAGTCGCAAATCAGGAGGATGA
GGATCCCACCCCATACCTGTTCGTGTCTTTGGAGCAAAGGCGTATCGATCAATCGAAACCCTATGACTCGAAGAAGTCTT
GCTGGATCCCCGACGAGAAGGAGGGTTATCTCCTTGGTGAGATCAAGGCCACCAAGGGCGATATCGTCTCCGTTGGTCTG
CAGGGTGGAGAGACACGAGACTTAAAGAAAGATCTGCTCCAGCAAGTGAACCCCCCGAAATACGAAAAAGCCGAGGATAT
GTCCAACTTGACATACCTTAACGATGCCTCTGTGCTCCATAACTTGAGACAGAGATACTACAACAAGCTGATCTACACCT
ACTCCGGTCTTTTCTGCGTTGCCATCAATCCTTACAAGCGTTACCCCGTGTATACCAACCGTTGCGCTAAGATGTACCGT
GGCAAGCGCCGTAATGAGGTGCCACCCCATATTTTCGCCATCTCTGACGGTGCCTACGTCGACATGTTGACCAACCACGT
GAATCAATCTATGTTGATCACCGGTGAGTCTGGTGCCGGAAAGACTGAGAACACCAAGAAGGTCATTGCGTACTTCGCCA
CTGTTGGTGCCTCCAAGAAGACCGATGAGGCCGCCAAGAGCAAGGGCTCCCTGGAAGATCAGGTTGTGCAGACCAACCCT
GTGCTTGAGGCCTTCGGTAACGCCAAGACCGTGCGTAACGATAACTCCTCTCGTTTCGGTAAATTCATCCGTATCCACTT
CGGACCCACTGGTAAACTGGCTGGTGCTGATATTGAGACCTATCTGCTGGAGAAGGCTCGTGTCATCTCCCAGCAGTCCC
TGGAGCGTTCCTACCACATCTTCTACCAGATCATGTCTGGCTCCGTTCCCGGTGTTAAAGAGATGTGCTTCCTCTCCGAT
AACATTTACGACTACTATAACGTATCCCAGGGTAAAGTAACTGTACCCAACATGGATGACGGTGAGGAATTCCAGCTTGC
AGATCAAGCCTTCGACATCTTGGGCTTCACCAAGCAGGAGAAGGAGGACGTGTACAGGATCACCGCCGCTGTCATGCACA
TGGGTGGCATGAAGTTCAAGCAACGTGGTCGCGAGGAGCAGGCTGAGCAGGACGGCGAGGAGGAGGGTGGCCGTGTGTCG
AAGCTGTTCGGTTGCGATACCGCCGAGCTGTACAAGAACTTGCTGAAGCCCCGCATCAAGGTCGGCAACGAGTTCGTCAC
CCAGGGCCGTAACGTCCAGCAGGTCACCAACTCGATCGGTGCCCTCTGCAAGGGTGTGTTCGATCGTCTGTTCAAGTGGC
TGGTGAAGAAGTGTAACGAGACTCTGGATACCCAGCAGAAGCGTCAGCACTTCATTGGTGTACTGGATATTGCTGGTTTT
GAGATCTTCGAGTACAACGGCTTCGAGCAATTGTGTATTAACTTCACCAATGAGAAACTGCAGCAGTTCTTTAACCATAT
CATGTTCGTCATGGAGCAAGAGGAATACAAGAAGGAGGGTATTAACTGGGACTTTATCGATTTCGGTATGGACTTGCTGG
CCTGTATCGATCTGATTGAAAAGCCCATGGGTATCTTGTCCATCCTGGAGGAAGAGTCTATGTTCCCCAAGGCCACCGAT
CAGACCTTCTCGGAGAAGCTGACCAACACCCATTTGGGCAAGTCGGCTCCATTCCAGAAGCCCAAGCCTCCAAAGCCCGG
TCAGCAGGCTGCCCACTTCGCCATTGCCCATTATGCTGGTTGTGTGTCCTACAACATCACCGGTTGGTTGGAGAAGAACA
AGGATCCTCTGAACGACACCGTTGTCGACCAGTTCAAGAAGTCGCAGAACAAGCTGCTGATCGAAATCTTCGCCGATCAC
GCCGGTCAGTCGGGTGGCGGTGAACAGGCCAAGGGAGGTCGTGGCAAGAAGGGCGGTGGCTTCGCTACCGTCTCGTCGGC
CTACAAGGAGCAGTTGAACAGCTTGATGACCACTCTGCGTTCGACCCAGCCTCACTTCGTCCGTTGCATCATTCCCAACG
AAATGAAGCAGCCTGGCGTGGTTGATGCCCACTTGGTCATGCACCAGCTGACCTGTAACGGTGTGCTTGAAGGTATCCGT
ATTTGCCGTAAGGGCTTCCCCAACAGGATGATGTACCCTGACTTCAAGATGCGTTACATGATTCTGGCTCCTGCCATCAT
GGCGGCCGAAAAGGTGGCCAAGAATGCTGCCGGAAAGTGCTTGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTG
GTCACACCAAGGTGTTCTTCCGCGCCGGTGTCCTGGGTCAGATGGAGGAGTTCCGTGATGAGCGTCTGGGCAAGATCATG
TCCTGGATGCAGGCATGGGCCCGTGGTTACCTGTCCCGTAAGGGCTTCAAGAAGCTCCAGGAACAGCGCGTCGCCCTCAA
GGTTGTCCAGCGCAATCTGCGCAAGTACCTGCAGCTCCGTACCTGGCCCTGGTACAAACTGTGGCAGAAGGTCAAGCCCC
TCCTCAACGTCAGCCGCATCGAGGATGAGATTGCCCGTCTGGAGGAGAAGGCCAAGAAGGCTGAGGAACTGCATGCCGCT
GAAGTGAAGGTGCGCAAGGAGCTCGAGGCCCTCAACGCCAAGCTTTTGGCTGAGAAGACCGCTCTGCTGGACTCCCTGTC
CGGCGAGAAGGGTGCCCTGCAGGACTACCAGGAGCGCAACGCCAAGTTGACCGCCCAGAAGAACGACCTCGAGAACCAGC
TGCGCGATATCCAAGAGCGCCTGACTCAGGAGGAGGATGCCCGCAACCAGCTGTTCCAGCAGAAGAAGAAGGCCGATCAG
GAGATCTCTGGCCTGAAGAAGGACATCGAGGATCTGGAATTGAACGTCCAGAAGGCCGAGCAGGACAAGGCCACCAAGGA
TCACCAGATCCGCAACTTGAACGACGAGATCGCCCACCAGGATGAGCTCATCAACAAGTTGAACAAGGAGAAGAAGATGC
AGGGAGAGACCAACCAGAAGACCGGTGAGGAGCTCCAGGCCGCCGAGGACAAGATCAACCACTTGAACAAGGTTAAGGCC
AAGCTCGAGCAGACCCTCGATGAACTGGAGGATTCGCTGGAGCGCGAGAAGAAGGTGCGCGGCGATGTTGAGAAGTCCAA
GCGCAAGGTTGAGGGCGACCTCAAGCTCACCCAGGAGGCTGTTGCCGATCTGGAGCGCAACAAGAAGGAGCTCGAGCAGA
CCATCCAGCGCAAGGACAAGGAGCTGTCCTCCATCACCGCCAAGCTCGAGGACGAGCAGGTCGTTGTTCTGAAGCACCAG
CGCCAGATCAAGGAACTGCAGGCCCGCATCGAGGAGCTCGAGGAAGAGGTCGAGGCTGAGCGCCAGGCCCGCGCCAAGGC
TGAGAAGCAGCGCGCCGATCTGGCCCGCGAACTCGAGGAATTGGGCGAGCGTCTGGAGGAGGCTGGCGGTGCCACCTCTG
CCCAGATTGAGCTCAACAAGAAGCGTGAGGCTGAGTTGAGCAAACTGCGTCGCGATCTTGAGGAGGCCAACATCCAGCAC
GAGTCCACCCTGGCTAACCTGCGCAAGAAGCACAACGATGCCGTCGCCGAGATGGCCGAGCAGGTTGATCAGCTCAACAA
GCTGAAGGCTAAGGCTGAACACGATCGCCAGACTTGCCACAACGAGCTGAATCAGACTCGTACCGCCTGCGATCAGCTGG
GTCGCGATAAGGCTGCCCAGGAGAAGATCGCCAAGCAGCTGCAGCACACCCTCAACGAGGTGCAGTCGAAACTGGACGAG
ACCAACAGGACTCTGAACGACTTCGATGCCAGCAAGAAGAAGCTGTCCATTGAGAACTCCGATCTGCTCCGCCAGCTGGA
GGAGGCCGAGTCCCAGGTGTCTCAGCTGTCCAAGATCAAGATCTCTCTGACCACCCAGTTGGAGGACACCAAGCGTCTGG
CCGACGAGGAGTCGCGCGAGCGTGCCACCCTTTTGGGCAAGTTCCGCAACTTGGAGCACGACCTGGACAATCTGCGCGAG
CAGGTTGAGGAGGAGGCTGAGGGCAAGGCCGATCTGCAGCGCCAGCTGAGCAAGGCCAACGCTGAGGCCCAGGTGTGGCG
CAGCAAGTACGAGTCCGATGGCGTTGCCCGCTCTGAGGAGCTGGAGGAAGCCAAGAGGAAGCTGCAGGCCCGTTTGGCCG
AGGCCGAGGAGACCATCGAGTCCCTCAACCAGAAGTGCATTGGCCTGGAGAAGACCAAGCAGCGTCTGTCCACCGAGGTG
GAGGATCTGCAGCTGGAGGTCGACCGTGCCAACGCCATTGCCAACGCTGCCGAGAAGAAGCAGAAGGCCTTCGACAAGAT
CATCGGCGAGTGGAAGCTCAAGGTCGACGATCTGGCTGCTGAGCTGGATGCCTCCCAGAAGGAGTGCCGCAACTACTCCA
CCGAGCTGTTCCGTCTTAAGGGCGCCTACGAGGAGGGCCAGGAGCAGTTGGAGGCTGTGCGTCGTGAGAACAAGAACCTG
GCCGATGAGGTCAAGGATCTGCTCGACCAGATCGGTGAGGGTGGCCGCAACATCCATGAGATCGAGAAGGCCCGCAAGCG
CCTGGAAGCCGAGAAGGACGAGCTCCAGGCTGCCCTCGAGGAGGCTGAGGCCGCTCTTGAGCAGGAGGAGAACAAGGTGC
TCCGCGCTCAGCTTGAGCTGTCCCAGGTGCGCCAGGAGATCGACCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAAC
ACCCGCAAGAACCACCAGCGTGCCCTCGACTCCATGCAGGCTTCCCTCGAAGCCGAGGCCAAGGGCAAGGCTGAGGCCCT
GCGCATGAAGAAGAAGCTGGAGGCTGACATCAACGAGCTTGAGATTGCTCTGGATCACGCCAACAAGGCTAACGCCGAGG
CCCAGAAGAACATCAAGCGTTACCAGCAGCAGCTGAAGGACATCCAGACTGCCCTCGAGGAGGAGCAGCGCGCCCGCGAC
GATGCCCGCGAACAGCTGGGTATCTCCGAGCGTCGTGCAAACGCCCTCCAGAACGAACTGGAGGAGTCTCGCACTCTGCT
GGAACAGGCCGACCGTGGCCGTCGCCAGGCCGAACAGGAGCTGGCCGATGCCCACGAGCAGCTGAACGAAGTGTCCGCCC
AGAACGCCTCCATCTCCGCTGCCAAGAGGAAGCTGGAGTCCGAGCTGCAGACCCTGCACTCCGACCTGGACGAACTCCTG
AACGAAGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCTATGGTCGATGCCGCCCGCCTGGCCGATGAGCTCCGCGCTGA
GCAGGATCATGCCCAGACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGGAGCTGCAGGTCCGTCTGGACG
AGGCTGAGGCCAACGCCCTCAAGGGAGGCAAGAAGGCCATTCAGAAGCTTGAGCAGCGCGTCCGCGAGCTCGAGAACGAG
CTGGATGGTGAGCAGAGGAGGCACGCCGATGCCCAGAAGAACCTGCGCAAGTCCGAGCGTCGCGTCAAGGAGCTGAGCTT
CCAGTCCGAGGAGGACCGCAAGAACCACGAGCGCATGCAGGATCTGGTCGACAAGCTGCAACAGAAGATCAAGACATACA
AGAGGCAGATCGAGGAGGCTGAGGAAATCGCCGCCCTCAACTTGGCCAAATTCCGCAAGGCTCAGCAGGAGCTTGAGGAG
GCCGAGGAGCGCGCCGATCTGGCCGAGCAGGCCATCAGCAAATTCCGCGCCAAGGGACGTGCCGGTTCTGTCGGTCGTGG
TGCCAGCCCAGCGATCTAAGCCTGAGGCATCACCATCGAATAAAAAATCTATATAGCGATCCAATTATGGTTCATTTACG
ATAATGAGAGAACAAAAACCATGCAAAGAGAATTATAGCTTATAAGAATTATTATAAAATAAATACTAATAACAATAATA
TAGATGCATCACATGACATTCGCTAGCAGACAAAAATGTATAAATTAGAGGCCACCCCAATCAAAAATCAATGGATCAAT
TCATCGAATACCAACCAAGAATGCGTTCATTTTGACAGAAAACCAGACAAAAAGCCAAAAAAATATTGCAAATAAAAAAG
CAAGCAACCAACGCAGCACCAGGCTAAATCAATCGAAATGCTTTCTTTACCACTATTTACAAAAAAGAGAAAAAACAATA
CTATTCTTCCACTATATTATTATAAACTGTATTTGTACATGTGTACTGCAGCCGACAGCGTCAAAGGGCCGCAAGAGCGC
GCTGCTGGAGCAGTAGAAACTTTCTTGAAACATTTCCCCGTGCGACGTCCGTTAGGCCACAATTCGACGGATTGGCCTTC
CCACCAAGATTCGACCTTGCTCCTGAAAACGAATTCTAAATGCCATTTCATTTTTTAATTTATTTTAAATGATATTTCAT
AATGATTATGTTTATGATTTTAATTTAATTTCTTAATTTAAAAACAAAATAATAAAACTATAACAAAATAAATATCGAAA
ACGACGGGAGGCAAACCACCAACAACGCCAGATGCACTTAGGCAAAAAAATAAAATCATATAACAACAATCGATCACCAT
CGATTAGCATACATAATACATAAGTGATCAGTAACAGGCTATTGTGTAAGCGCGACATTTGCCATGGGGACACTGCTCGC
TGGACCTGTATTTGTATTTGTATTTATATATTTTTATACAACTTTCGAAATGCATTCAACCAACTAACTATGAAAGAACC
ATCGACTCTCAACCGAACAACATGAGAATAATCGCGAAACGTGAGCCCCGTCAAAATGAAGGCCCCGCGGAGGTGTCCGC
CGGTAAATGTCGCCCGCAGTTCGAATATTTTGCTCTATATGTACTCCCAATATTGTTTGTCATGCAGACCAGACAAGACT
TACGGACGACACGAGCTACACACTGCGCTTATGTTTATGTTTAACTCTGACTCTATCTAACAATGATAGGGAGATAAGAT
CATCACTTGACACTAAATGAAAAGTATACAAAAAAGGAACAAAATAAATGTAAATCAATTT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Mhc-RA
        FBtr0080896
        6671
        Mhc-RB
        FBtr0080897
        6671
        Mhc-RC
        FBtr0080898
        6671
        Mhc-RD
        FBtr0080900
        6671
        Mhc-RE
        FBtr0080899
        6671
        Mhc-RF
        FBtr0080901
        6671
        Mhc-RG
        FBtr0080895
        6671
        Mhc-RH
        FBtr0080902
        6671
        Mhc-RI
        FBtr0080903
        6671
        Mhc-RL
        FBtr0080905
        7173
        Mhc-RM
        FBtr0080907
        7173
        Mhc-RN
        FBtr0301827
        6735
        Mhc-RO
        FBtr0301828
        6833
        Mhc-RP
        FBtr0301829
        6735
        Mhc-RQ
        FBtr0307492
        6813
        Mhc-RR
        FBtr0307493
        6671
        Mhc-RS
        FBtr0307494
        6826
        Mhc-RT
        FBtr0307495
        6621
        Mhc-RU
        FBtr0307496
        6895
        Mhc-RV
        FBtr0346712
        6826
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Mhc-PK
        FBpp0080463
        1936
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Mhc-PA
        FBpp0080453
        1962
        Mhc-PB
        FBpp0080454
        1962
        Mhc-PC
        FBpp0080455
        1962
        Mhc-PD
        FBpp0080457
        1962
        Mhc-PE
        FBpp0080456
        1962
        Mhc-PF
        FBpp0080458
        1962
        Mhc-PG
        FBpp0080452
        1962
        Mhc-PH
        FBpp0080459
        1962
        Mhc-PI
        FBpp0080460
        1962
        Mhc-PL
        FBpp0080462
        1936
        Mhc-PM
        FBpp0080464
        1936
        Mhc-PN
        FBpp0291041
        1949
        Mhc-PO
        FBpp0291042
        1962
        Mhc-PP
        FBpp0291043
        1949
        Mhc-PQ
        FBpp0298827
        1962
        Mhc-PR
        FBpp0298828
        1962
        Mhc-PS
        FBpp0298829
        1962
        Mhc-PT
        FBpp0298830
        1962
        Mhc-PU
        FBpp0298831
        1949
        Mhc-PV
        FBpp0312323
        1962
        Comments

        Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

        GC splice donor site postulated

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (3)
        Reported As
        Symbol Synonym
        CG17927-RK
        (FlyBase, 1996-)
        Mhc-RK
        (FlyBase, 1996-)
        Mhc+RC
        (FlyBase, 1996-)
        Secondary FlyBase IDs
        • FBtr0000478
        • FBtr0000479
        References (3)