FB2026_02 , released June 18, 2026
Transcript: Dmel\msl-1-RA
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General Information
Symbol
Dmel\msl-1-RA
Species
D. melanogaster
Annotation Symbol
CG10385-RA
FlyBase ID
FBtr0081130
Feature type
mRNA
Associated gene
Dmel\msl-1
Evidence Rank
Length (nt)
5021
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 65 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CGCCATACTTTTAAGAGCATTTTCGGGGCGACTTTACATTGTGAGGACAATTGTGGAAAAAGCGGTGAAAGAACGTTCAA
AAACGAACCGAAAAACTGCTGCCTAAATGCGGTCACCACGTGCGATAAGAACGCCACGTTTAAAACGATAAATCCATTAG
ATTCTGGCCAAGAAAAGAGCGGTTCTTTTGCGAGGGCGAGCAAGGAAAATTTAGTGTGGTGCGAAATTGTAATCGGGATT
CTACGCATTGTACGGCGTATCAGCTGAAGAGATTGTGTGCACCCCAAGCGACGCAAACAAAACCAAAACAAAACAAAAAC
ATTTGGAGAATTATGAGATCGTAGGACCGACGGCACGGGATTCAATTCGACTGCCATGGACAAGCGATTCAAGTGGCCGC
CCAAAAAGCGGGCCAACTACTTGGAATCGCCCTATCCCCACATACCGTCGCGTGGCCGCCAAAGGAATCTGCACGGCCAT
CCCAATCAGACGCAGCATCTTCATCAGCATCCCGGGAAGATCTATGAGCGCCAGCAATATGGCAATGGTCGTGGAGGACA
TGGCGGGGGTAATAACAACTACCGAAAGCTTTTGCATTCGCTGCCAGCTGAGCATGGTGGCGGAGCCATGGCTCCTCCTT
CCTCCGGCGGAACCGTGTGTGCCGGCGCCGATATGGTCAAGCTCATCTCGGAGAACAACAACCTGAGGCGCATGGTTATG
TTGAACTTAAACCTGATGCAGGAGCAGACGGACAGCATAGCGGCCAAGGACAAGGAGCTGGACGACCAAAGCGCTAAGAT
GAGCGTGGTGAAGGCGCAGAATGAGGAATTAAAGCAGGCCGTTGCTCAGTTGGAGGCCGCCAACCAGGAACTATGCAAAC
AGCTGCGGCGAAAGAACCAGCGAAGGAACGACAATGACGACGACGACGATGATCCCCCACTGCCACCTGCTGCCCCGCAG
CAGAAGTTGATACGTTGTCATGCTGAGACGCAAACTGTGTTTCGGGAGCGGGAACAGGGCACACAAACGATAGATGCGCA
GCCTCAATTCGCGAATGCACTTCCCAGGGGTATCAACATGAAGGAGTCTCCCGCTCTGGACCATCACGCTGGAGCGGTAA
CGAATCAGCCAGCCAGCAAACGCTCGGAGAGCAAAGGCCGCGGTGAATTCAACGGTAAAAAGGTGAGCACGTTTATTCTC
CAGCGCATGAATCAGGACTTCGAGCACCACATCCACGAGCAAACGGAAGTAGCAGAGGAGCACGAGATGGAGGCACATAA
GGAGCAAATATCTCAGGAAGAGGACCAACTGGTCGCTGAGGAAGATCATCTGCATATGCAAGAAGTGCACACCGAGGAAG
TCGTTGGAGGCGATATCTTTCATGATGCTTTGGAATCAATTGAAATGGAAGTGGTCACCGAAGAGCTGGTTGATATGGAG
GAGCATGGACAGTCCGTGGATGCCAACGGCCATATCGAGGAGGATGATGACGAGGACGACGAAGATGACGAGAATAGTGA
TAAAGACGATGACAGTGAAGAGGATGATTATCCGTGGATGCATAGCGATGCGGATGTAAACGCCAGAACTGAGGAAGAGC
TCTGGCAGAATCAGAATTACCTTTTGGAATTGGACCCGACGGAGGAGAAGACCTGTGCGCCTTCGGCCCATTCAACTCCC
AATCACCAGCAGAAGTCTTCGACACAGGCAGAGATAAGGAAAGAAGGAAATCAGAATCGGATAACTGAAAAGTTGTTGCA
ACTAAAGCCTGAGCCAATGGTAGATGCATTAGAAGCGCCGATTCTCCCGAAGTGGGTGGCTTTTAAGAAAAAGGATAAGG
AACATGAATCAGTCCCCGAGTCCCCAGAAGTACCCAAGCAGCAGCCGCATCAGGAAGATGCCATCGTTGATCATAATGCA
ATAAAGAATCAGTTGGAAGTTCCCAAGCCGGACTTAAAACCGAAGGACCAGCCCAAAGACGAACAGAGGCAGGATGGGCA
GCTGGATGTTCGCGTGGAACCACAAGAGGATGTTCGTAAGGTACAGAAGGAAACTCTGAAAAGGCAACCAGAGGATGCAC
CTAAGCACCTTCCGAAAGCGGTAGCCCCAAAGGTTACGAAAACATCCTCTCGAGAAAGCACGTTGCCCAAGGCAAACACC
GCTGACATAAAAGACGCTCCCGCTCAAAAAGTAATAGCCAACCATCAGTCCACCAAGACGCAAACGGATCCTGTAAAAAC
GCAGCGTTTGCAGGTTAAGATCAGGCAGTATGAAATGCATCCTGACATGAGAACCGGCTCCTCCGCCCCGTCTGATATTC
GGAAACAAAAGAACGTTGATCCAGTTTCGACGCCCGAGACGAAAACCATTAAAAGTAAAAGTATGTTGGTCAATGATAAA
AAGACCACGTCGGAAACGTCTCAGAGCCCAGATCAAGAAATAGATGTGGAAACAGTTAGAAGAAAACTGGCGGAACATTT
AAAAAAGGAGCTCCTAAGCCAGAGTCATTCGTCACAGGTTACGCTCAAGAAAATAAGAGAGAGAGTCGCCACAAATCTAA
TATATCCACCACCCAGTGCACCAGTATCCTCAACAACAATAACCCCAGCGCCTACGCCGTCAACGACACCAACGCCTGGC
TCAACGCCACAGCATGCGGTTACATCCTCAATGGACCAGGAAATATCTGCAGCAAAATCGAAATCCAAGGCAGCTGAACA
AATAGCAACTCCTCTGACACCTCAATCTAATAGCAGTGTTAGCAGCACCACTTCGACTATCCGAAAAACGCTAAACAACT
GTTCACCCCACACGTACAGCAAGGCAACGGCGAGATCGGGAAAACTGCAGTCCAGATTCCGCACTGCCACGTTTCCGTAC
AGCACGAGAACGTGGGAGGATCAGGAGTTCCACTGTGACAACGAGTTCTTCCTGGAGGAGGCCGACGAGCTGCTGGCGGA
TAACCCTAGTCTGGAGATACCCAAGTGGCGGGATGTCCCAGTGCCACCCAGTTCGGATAAAATTGACACAGAATTACTGA
GCGATGCGACCTTCGAGCGCCGGCACCAGAAATATGTGAAGGATGAGGTCGATCGAAAGTGTAGGGATGCACGTTATATG
AAGGAGCAGATACGGCTTGAACAGCTTCGGATGCGACGGAACCAAGACGAGGTGTTGGTTGCGCTGGATCCTCTGCGCGC
CTCCACTTTCTACCCGCTGCCCGAGGACATAGAGGCCATCCAATTCGTCAACGAGGTGACAGTTCAGGCATTCGGCGAAA
ACGTGGTCAACATGGAGGCGCGGGATGATTTCGGTGTGCCTTGGGTGGATGCAATCGAAGCGCCAACCTCCATAGCCAGG
TCCAAGGCACTGGCTGAGCCGGTGGCAACGTTGGCTAGCAAAAAAATACCCACCACTGCTGCCGAGGCGAGGCATCAAGA
AAATCACTCCTCCTACGTGTTTCCCAAGCGACGCAAGCGCCAGAAGAATCGTTAGCCAGGAAACGCCTGGGGGATCTGAT
ACTGGAGCTAAGCAGAAGACTGTCGGTTGGGGGAAGTCGTTGCGTTTGACATACTAATGATTTTCAGTTTTAAATCATGA
ATTATTTCTTAAGCTTAACGTGAAAGCACCAGAGTTAACAGTAACGATTACCACAGATCGTCTAGAAGTCAAATAATCCA
GAGCAGACGATGTTTATTGTATATATGGTTCCTCAACTGTCCGTTTTTATTTGTGTAATAAAATGAACGGAACGCTGAAT
TCTGGAACATTAGAAATTCTTTGTTATAGAATCTATAAATTTATGTCAAAGTTTTGTCGTTTCTTATGCGATGAGAGATC
TTAAAAGGCAAGTAAATTGAGCTGTCCTATTCAAACATTTTTCTATTAAATTGTTATCATATTTATTTCCTTGAAATATA
AATAATTCGATCTTATATTAGATGTAAATGAATCCAAATGTTCGTCGCCTGGTCTGGAAATGATTAGTTTTTAGTTAACG
TCTTGCAATTGAAAAGAGTTTCACCCTTGCTTGTTTCCAATGTACGTAAATTACTTAGTCCCACACAGCATGTAATTCAA
ACCAGTCGCTTAGTTAGATTGGTTAACTCATCTCAGCTTTATCACCTTTAAAATCGCCCGCACTAAAGTGATAAGAACAC
GAAAGATATTCACATAAGTTATATTGGGCATTTTTTTGGAGAAAAACAATGAAATTCGTAGACTTATATTTTTAAATATT
TTTTTTCTTTAGCCCTTATAACCATTTTTTTTGTCTTTGTTTATACTGTTATATCTGTCGATTCTCGAATGCAGACAACG
TGTGTGTTGCAAAGAGTTACTCAGGTATATCTCTGATAATTTGTCTTTTTTTTTAGGATTTGATTGTGTAAAAATTGAGT
GCGAGTGGTTGTCTGCTTCGAGTAATCAAATTATACATTGGATCTATTGTTTTATTTTATTAACTTCATTAAACTTGTTT
TATGTTGTATCGAACAAGAAAGGCCGTTAAGATGAAAACTAGATTTGAAGAATAAATATAAAACTGATTCCCGAACTGCA
CACCCGTTTGGCCTTATGGGCACCATGTATTTTTGGCTAAATATTGTTTCGTTTAACACTTCTTCTGTTTGACTTTCTGT
CGCAATGATATGGAGCCTGCCAACGTCCGGAGAAATCAAATCACCAGCTCGCTTTCGAGTGGCGTCTTATTTTTGTACAT
TTCGATAGGTGTAAAGTCGGTTACTTGTAATATAGCGTTAAGTAGGCACTGTACCCAAACGCATAGAGATAATTATAATG
TAACAAAGTAAATACGATACGATGTACATTGTCCAGGAAAAGGAGGAGCGGAGGGTGGATGAACTTCGTTCAACACCATT
TTACACCATTCAATGTAATTAGCGTTAAATAGTTCAATTTACTGAAGCTTCAACTAAAAATCAATTCGAAATTAATTGCC
ACCATTGTAGAGCCCTAAACAAACTCACCTACTGTAAGAATAAATGTACTACATACAATGT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      msl-1-RB
      FBtr0343118
      3757
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      msl-1-PA
      FBpp0080674
      1039
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      msl-1-PB
      FBpp0309817
      1039
      Comments

      Extended 3' UTR based on RNA-Seq and/or EST data.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      msl-1-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)