FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Pax-RA
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General Information
Symbol
Dmel\Pax-RA
Species
D. melanogaster
Annotation Symbol
CG31794-RA
FlyBase ID
FBtr0081213
Feature type
mRNA
Associated gene
Dmel\Pax
Evidence Rank
Length (nt)
2235
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 23 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      GTTCAGTTGATTTTAAGATTTTGCCGAGCGAAAATATTTTGTGTGCTGCTGCTGCTGCTGCGCCTCTGGTCCAGACAAAC
CGACAATTTTGCATATCGGCATACGAGTGACAATCAAGCAATACATTTCGATTCCATCGATTCTGGCCAAATTTAGTGCG
TGAAATGTCTTCAAAACTGATATCATCGTCGTTCCACAGTTCGCCCCTCAGCGACTGTTTCAAAGTGGGCGAGTTCGAGC
GACGTCTGGATGCTCTATTAGCCGACCTGCAAAACAGTGTGCCAGGCCAGCCGCAGCAACCTCAGCCGCAATATGGAACT
GTCCAGCCCAAACATCAAGCTCTGCAGCAACAGCAGTTTGTGGACAACACTCCAGGTTATGGAAGTCTCAGGGGCAAAGC
CCAGCCCCAGGTGTATCAAGAGCACTACAGCGTAGAGACACGCTCCCCAACGGCTGGACATGATTTTAATGGCTCCTCAA
CGACTCCGGGATACGCTAACCAGGGATCGTTGCCACGTCAGGCGGCGGGTGCAAGCACAGGACTCTCAGAACTGGACTCC
TTGCTGCAGGATCTGCAGAAAATCGATGTACCGGTCAACTACAGTACTCCAGTCTCGAAATACAATACGATGAATAGTTA
TGCCACCGTGGAGGAGCGTCCTTCAGTGGACAGCCTGCTGAAAGAACTGGACAATGCTCACATCTATGCTGTTCCTAACG
GATCTGCGCATAAATCTCCGACGCCGGGACGACATGTCACCATCACCGTTCGGGAAACGAAGACGGAGAAGTTGACGGGT
CCGGATGGACCAGTTGGCACTGTCGAGGAGCAAATTGTGCAGCAGAAGGATTCTTATACGCCCAATCATGCTGTTCCGGG
ACAACAGGTGCATCAGGCCTATACGTCGCAGGCCACCAAGGAACTGGATGATCTGATGGCTTCACTTTCCGACTTCAAGG
TTAGCAACGGAACAAACGGCATCGGAAACGGCAGTCATCCGCAACAGCACTCGTCGACAGTGCAGCACCAGACGGTAACC
GACTACGCCAGACCAAACAAGGGTAGCCAGCAGGCACATCTCACCCAGACGATCGAGGAGACGACCATCGTCGAGGACAG
TCGCGAGGATCAGTTGGATTCTATGCTAGGCAATCTACAGGCCAATATGAGTCGCCAAGGAGTCAATACCGTGCAGAAGG
GCTGCTGCAATGCCTGCGAGAAGCCCATTGTGGGCCAGGTGATCACAGCCCTGGGCAAGACATGGCATCCGGAGCACTTC
ACGTGCAACCACTGCAGCCAGGAGTTGGGCACCCGCAATTTCTTCGAGCGCGACGGCTTCCCGTACTGCGAGCCGGACTA
CCACAATCTGTTCAGCCCGCGCTGCGCCTACTGCAACGGCGCCATTCTGGACAAGTGCGTAACGGCGCTGGACAAGACCT
GGCACACGGAGCACTTCTTCTGCGCCCAGTGCGGCCAGCAGTTCGGCGAGGAGGGATTCCATGAGCGTGACGGCAAGCCG
TACTGTCGCAACGACTACTTCGAGATGTTTGCCCCGAAGTGCAATGGCTGCAACCGCGCCATTATGGAGAACTACATCTC
GGCGCTGAACTCGCAGTGGCATCCGGATTGCTTCGTCTGCAGGGACTGCCGACAGCCCTTCCAAGGAGGATCCTTCTTTG
ATCACGAGGGACTGCCGTACTGCGAGACGCACTACCATGCCAAGCGAGGATCCCTGTGCGCCGGGTGTTCCAAACCCATC
ACCGGACGCTGCATCACGGCCATGTTCAAGAAATTCCACCCGGAACACTTCGTCTGCGCCTTCTGCCTGAAGCAGTTGAA
TAAGGGCACTTTCAAGGAGCAAAAGGACAAGCCATACTGCCACACCTGCTTCGACAAGATATTCGGATGAAGATATTCGC
AGCTGCCAAACTCTAGTTATGCATATAATACTGTTTTTTATACGATTTACGACCCAATCCCACACGCACCAGCCCCACTC
AACCACCCCCCCCCCCCACACACCTGTACACCTACTTACCGTGCATCTGTGCTTTGTATAACCGAGTCAATTTAGTAATT
TAATTAACGCCATCCGAGCAGGATACGATAATAGAATGCGATCGTAATCAATTAGCAGACACTAATCCTAATCAATAATG
TTGGTCACTTTGATATTGCTACTCGTTCGACATGAAAAGACCATAGAACCGAATGATAAATAAATAAGAGAAACC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Pax-RB
      FBtr0081212
      2043
      Pax-RC
      FBtr0081210
      2377
      Pax-RD
      FBtr0081214
      1380
      Pax-RF
      FBtr0081211
      2447
      Pax-RG
      FBtr0100449
      2583
      Pax-RH
      FBtr0306598
      2097
      Pax-RJ
      FBtr0334166
      2253
      Pax-RK
      FBtr0334167
      2255
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Pax-PA
      FBpp0080754
      581
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Pax-PB
      FBpp0080753
      556
      Pax-PC
      FBpp0080751
      557
      Pax-PD
      FBpp0080755
      197
      Pax-PF
      FBpp0080752
      581
      Pax-PG
      FBpp0099871
      581
      Pax-PH
      FBpp0297553
      563
      Pax-PJ
      FBpp0306283
      581
      Pax-PK
      FBpp0306284
      581
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG31794-RA
      (FlyBase, 1996-)
      Pax-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)